RNA–Protein interactions for RNA: ENST00000476967.1

CNOT10-214, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 2

Gene CNOT10, Length 354 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-214ENST00000476967 KIF1AQ12756 1690 aa4.81□□□□□ -1.64
CNOT10-214ENST00000476967 LZTS3O60299 673 aaPredicted RBP4.81□□□□□ -1.64
CNOT10-214ENST00000476967 CD2BP2O95400 341 aaKnown RBP4.81□□□□□ -1.64
CNOT10-214ENST00000476967 EIF4G2P78344 907 aaKnown RBP eCLIP4.81□□□□□ -1.64
CNOT10-214ENST00000476967 TAGLNQ01995 201 aaKnown RBP4.81□□□□□ -1.64
CNOT10-214ENST00000476967 LONRF3Q496Y0 759 aa4.81□□□□□ -1.64
CNOT10-214ENST00000476967 RNF187Q5TA31 235 aaPredicted RBP4.81□□□□□ -1.64
CNOT10-214ENST00000476967 PLEKHM2Q8IWE5 1019 aa4.81□□□□□ -1.64
CNOT10-214ENST00000476967 C1orf216Q8TAB5 229 aa4.81□□□□□ -1.64
CNOT10-214ENST00000476967 DHX38Q92620 1227 aaKnown RBP4.81□□□□□ -1.64
CNOT10-214ENST00000476967 PMM1Q92871 262 aa4.81□□□□□ -1.64
CNOT10-214ENST00000476967 ABCA3Q99758 1704 aa4.8□□□□□ -1.64
CNOT10-214ENST00000476967 U2SURPO15042 1029 aaKnown RBP4.8□□□□□ -1.64
CNOT10-214ENST00000476967 GTF2F1P35269 517 aaKnown RBP eCLIP4.8□□□□□ -1.64
CNOT10-214ENST00000476967 SERPINB4P48594 390 aa4.8□□□□□ -1.64
CNOT10-214ENST00000476967 CTDSPL2Q05D32 466 aa4.8□□□□□ -1.64
CNOT10-214ENST00000476967 RAD51AP2Q09MP3 1159 aa4.8□□□□□ -1.64
CNOT10-214ENST00000476967 TCEAL1Q15170 157 aa4.8□□□□□ -1.64
CNOT10-214ENST00000476967 FOXD4L6Q3SYB3 417 aaPredicted RBP4.8□□□□□ -1.64
CNOT10-214ENST00000476967 SOGA3Q5TF21 947 aa4.8□□□□□ -1.64
CNOT10-214ENST00000476967 FOXD4L3Q6VB84 417 aaPredicted RBP4.8□□□□□ -1.64
CNOT10-214ENST00000476967 NLGN1Q8N2Q7 840 aa4.8□□□□□ -1.64
CNOT10-214ENST00000476967 KLRG1Q96E93 195 aa4.8□□□□□ -1.64
CNOT10-214ENST00000476967 SPOCK3Q9BQ16 436 aa4.8□□□□□ -1.64
CNOT10-214ENST00000476967 TINF2Q9BSI4 451 aa4.8□□□□□ -1.64
CNOT10-214ENST00000476967 PDGFDQ9GZP0 370 aaPredicted RBP4.8□□□□□ -1.64
CNOT10-214ENST00000476967 EGFL7Q9UHF1 273 aa4.8□□□□□ -1.64
CNOT10-214ENST00000476967 WWC3Q9ULE0 1092 aa4.8□□□□□ -1.64
CNOT10-214ENST00000476967 TTC24A2A3L6 582 aaPredicted RBP4.79□□□□□ -1.64
CNOT10-214ENST00000476967 J3QL48 77 aa4.79□□□□□ -1.64
CNOT10-214ENST00000476967 PPFIA4O75335 1185 aa4.79□□□□□ -1.64
CNOT10-214ENST00000476967 MCCP23508 829 aa4.79□□□□□ -1.64
CNOT10-214ENST00000476967 HSD3B2P26439 372 aa4.79□□□□□ -1.64
CNOT10-214ENST00000476967 GMPRP36959 345 aa4.79□□□□□ -1.64
CNOT10-214ENST00000476967 SUZ12Q15022 739 aaKnown RBP4.79□□□□□ -1.64
CNOT10-214ENST00000476967 SLC15A2Q16348 729 aa4.79□□□□□ -1.64
CNOT10-214ENST00000476967 MORN1Q5T089 497 aa4.79□□□□□ -1.64
CNOT10-214ENST00000476967 C9orf131Q5VYM1 1079 aa4.79□□□□□ -1.64
CNOT10-214ENST00000476967 HELBQ8NG08 1087 aaPredicted RBP4.79□□□□□ -1.64
CNOT10-214ENST00000476967 SNIP1Q8TAD8 396 aaKnown RBP4.79□□□□□ -1.64
CNOT10-214ENST00000476967 PIF1Q9H611 641 aa4.79□□□□□ -1.64
CNOT10-214ENST00000476967 STK32BQ9NY57 414 aa4.79□□□□□ -1.64
CNOT10-214ENST00000476967 SBF2Q86WG5 1849 aa4.79□□□□□ -1.64
CNOT10-214ENST00000476967 E9PCH4 1651 aa4.78□□□□□ -1.64
CNOT10-214ENST00000476967 USP17L15C9J2P7 530 aa4.78□□□□□ -1.64
CNOT10-214ENST00000476967 USP17L10C9JJH3 530 aa4.78□□□□□ -1.64
CNOT10-214ENST00000476967 USP17L13C9JLJ4 530 aa4.78□□□□□ -1.64
CNOT10-214ENST00000476967 USP17L12C9JPN9 530 aa4.78□□□□□ -1.64
CNOT10-214ENST00000476967 USP17L11C9JVI0 530 aa4.78□□□□□ -1.64
CNOT10-214ENST00000476967 USP17L21D6R901 530 aa4.78□□□□□ -1.64
CNOT10-214ENST00000476967 USP17L18D6R9N7 530 aa4.78□□□□□ -1.64
CNOT10-214ENST00000476967 USP17L22D6RA61 530 aa4.78□□□□□ -1.64
CNOT10-214ENST00000476967 USP17L17D6RBQ6 530 aa4.78□□□□□ -1.64
CNOT10-214ENST00000476967 USP17L19D6RCP7 530 aa4.78□□□□□ -1.64
CNOT10-214ENST00000476967 USP17L20D6RJB6 530 aa4.78□□□□□ -1.64
CNOT10-214ENST00000476967 WNT7AO00755 349 aa4.78□□□□□ -1.64
CNOT10-214ENST00000476967 SH3BP5O60239 455 aa4.78□□□□□ -1.64
CNOT10-214ENST00000476967 TOMM70O94826 608 aa4.78□□□□□ -1.64
CNOT10-214ENST00000476967 USP46P62068 366 aa4.78□□□□□ -1.64
CNOT10-214ENST00000476967 RBL2Q08999 1139 aa4.78□□□□□ -1.64
CNOT10-214ENST00000476967 USP17L24Q0WX57 530 aa4.78□□□□□ -1.64
CNOT10-214ENST00000476967 MRPL58Q14197 206 aaKnown RBP4.78□□□□□ -1.64
CNOT10-214ENST00000476967 ZFYVE27Q5T4F4 411 aa4.78□□□□□ -1.64
CNOT10-214ENST00000476967 FAM200AQ8TCP9 573 aa4.78□□□□□ -1.64
CNOT10-214ENST00000476967 SLC16A10Q8TF71 515 aa4.78□□□□□ -1.64
CNOT10-214ENST00000476967 EVI5LQ96CN4 794 aa4.78□□□□□ -1.64
CNOT10-214ENST00000476967 ASB16Q96NS5 453 aa4.78□□□□□ -1.64
CNOT10-214ENST00000476967 ZSWIM4Q9H7M6 989 aa4.78□□□□□ -1.64
CNOT10-214ENST00000476967 PRDM9Q9NQV7 894 aa4.78□□□□□ -1.64
CNOT10-214ENST00000476967 THRAP3Q9Y2W1 955 aaKnown RBP4.78□□□□□ -1.64
CNOT10-214ENST00000476967 DHX57Q6P158 1386 aaKnown RBP4.78□□□□□ -1.64
CNOT10-214ENST00000476967 USP17L3A6NCW0 530 aa4.77□□□□□ -1.65
CNOT10-214ENST00000476967 USP17L4A6NCW7 530 aa4.77□□□□□ -1.65
CNOT10-214ENST00000476967 ATP2B4P23634 1241 aa4.77□□□□□ -1.65
CNOT10-214ENST00000476967 POLD1P28340 1107 aa4.77□□□□□ -1.65
CNOT10-214ENST00000476967 GNL2Q13823 731 aaKnown RBP4.77□□□□□ -1.65
CNOT10-214ENST00000476967 SWI5Q1ZZU3 235 aa4.77□□□□□ -1.65
CNOT10-214ENST00000476967 PLEKHG6Q3KR16 790 aa4.77□□□□□ -1.65
CNOT10-214ENST00000476967 GRIPAP1Q4V328 841 aa4.77□□□□□ -1.65
CNOT10-214ENST00000476967 EAPPQ56P03 285 aaPredicted RBP4.77□□□□□ -1.65
CNOT10-214ENST00000476967 ZNF746Q6NUN9 644 aaPredicted RBP4.77□□□□□ -1.65
CNOT10-214ENST00000476967 USP17L2Q6R6M4 530 aa4.77□□□□□ -1.65
CNOT10-214ENST00000476967 TSHZ1Q6ZSZ6 1077 aa4.77□□□□□ -1.65
CNOT10-214ENST00000476967 USP17L1Q7RTZ2 530 aa4.77□□□□□ -1.65
CNOT10-214ENST00000476967 RNF135Q8IUD6 432 aa4.77□□□□□ -1.65
CNOT10-214ENST00000476967 ZSCAN29Q8IWY8 852 aaPredicted RBP4.77□□□□□ -1.65
CNOT10-214ENST00000476967 CCDC146Q8IYE0 955 aa4.77□□□□□ -1.65
CNOT10-214ENST00000476967 CNPY4Q8N129 248 aa4.77□□□□□ -1.65
CNOT10-214ENST00000476967 ZSCAN1Q8NBB4 408 aa4.77□□□□□ -1.65
CNOT10-214ENST00000476967 PMFBP1Q8TBY8 1022 aa4.77□□□□□ -1.65
CNOT10-214ENST00000476967 HPS1Q92902 700 aa4.77□□□□□ -1.65
CNOT10-214ENST00000476967 GMLQ99445 158 aa4.77□□□□□ -1.65
CNOT10-214ENST00000476967 TGIF2Q9GZN2 237 aa4.77□□□□□ -1.65
CNOT10-214ENST00000476967 MAF1Q9H063 256 aa4.77□□□□□ -1.65
CNOT10-214ENST00000476967 IRF2BPLQ9H1B7 796 aa4.77□□□□□ -1.65
CNOT10-214ENST00000476967 SENP2Q9HC62 589 aa4.77□□□□□ -1.65
CNOT10-214ENST00000476967 CAPN10Q9HC96 672 aa4.77□□□□□ -1.65
CNOT10-214ENST00000476967 IQSEC3Q9UPP2 1182 aaPredicted RBP4.77□□□□□ -1.65
CNOT10-214ENST00000476967 COL4A3BPQ9Y5P4 624 aa4.77□□□□□ -1.65
CNOT10-214ENST00000476967 DAPK1P53355 1430 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms