RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 SF3B3Q15393 1217 aaKnown RBP15.65■□□□□ 0.1
HDAC6-219ENST00000476625 RGMBQ6NW40 437 aa15.65■□□□□ 0.1
HDAC6-219ENST00000476625 ANKRD13DQ6ZTN6 518 aa15.65■□□□□ 0.1
HDAC6-219ENST00000476625 TBC1D16Q8TBP0 767 aa15.65■□□□□ 0.1
HDAC6-219ENST00000476625 GBA2Q9HCG7 927 aaPredicted RBP15.65■□□□□ 0.1
HDAC6-219ENST00000476625 GGA3Q9NZ52 723 aa15.65■□□□□ 0.1
HDAC6-219ENST00000476625 IRS4O14654 1257 aaPredicted RBP15.64■□□□□ 0.09
HDAC6-219ENST00000476625 NOGQ13253 232 aa15.64■□□□□ 0.09
HDAC6-219ENST00000476625 KIF4BQ2VIQ3 1234 aa15.64■□□□□ 0.09
HDAC6-219ENST00000476625 MOB2Q70IA6 237 aa15.64■□□□□ 0.09
HDAC6-219ENST00000476625 PHAXQ9H814 394 aaKnown RBP15.64■□□□□ 0.09
HDAC6-219ENST00000476625 BABAM1Q9NWV8 329 aa15.64■□□□□ 0.09
HDAC6-219ENST00000476625 CA12O43570 354 aa15.63■□□□□ 0.09
HDAC6-219ENST00000476625 TRPA1O75762 1119 aa15.63■□□□□ 0.09
HDAC6-219ENST00000476625 DPF2Q92785 391 aa15.63■□□□□ 0.09
HDAC6-219ENST00000476625 CDCA5Q96FF9 252 aa15.63■□□□□ 0.09
HDAC6-219ENST00000476625 UFL1O94874 794 aa15.62■□□□□ 0.09
HDAC6-219ENST00000476625 ZNF157P51786 506 aaPredicted RBP15.62■□□□□ 0.09
HDAC6-219ENST00000476625 LMOD3Q0VAK6 560 aa15.62■□□□□ 0.09
HDAC6-219ENST00000476625 DUSP27Q5VZP5 1158 aa15.62■□□□□ 0.09
HDAC6-219ENST00000476625 DCPSQ96C86 337 aaKnown RBP15.62■□□□□ 0.09
HDAC6-219ENST00000476625 MBIPQ9NS73 344 aa15.62■□□□□ 0.09
HDAC6-219ENST00000476625 RNF186Q9NXI6 227 aa15.62■□□□□ 0.09
HDAC6-219ENST00000476625 MYH3P11055 1940 aa15.61■□□□□ 0.09
HDAC6-219ENST00000476625 ELL2O00472 640 aaPredicted RBP15.61■□□□□ 0.09
HDAC6-219ENST00000476625 ANGEL2Q5VTE6 544 aaKnown RBP15.61■□□□□ 0.09
HDAC6-219ENST00000476625 PRAMEF18Q5VWM3 479 aa15.61■□□□□ 0.09
HDAC6-219ENST00000476625 TMC4Q7Z404 712 aa15.61■□□□□ 0.09
HDAC6-219ENST00000476625 MYD88Q99836 296 aa15.61■□□□□ 0.09
HDAC6-219ENST00000476625 MXD3Q9BW11 206 aa15.61■□□□□ 0.09
HDAC6-219ENST00000476625 PAPPA2Q9BXP8 1791 aa15.6■□□□□ 0.09
HDAC6-219ENST00000476625 SLC10A3P09131 477 aa15.6■□□□□ 0.09
HDAC6-219ENST00000476625 RPS8P62241 208 aaKnown RBP15.6■□□□□ 0.09
HDAC6-219ENST00000476625 RASAL3Q86YV0 1011 aa15.6■□□□□ 0.09
HDAC6-219ENST00000476625 C2orf69Q8N8R5 385 aa15.6■□□□□ 0.09
HDAC6-219ENST00000476625 CSRNP1Q96S65 589 aa15.6■□□□□ 0.09
HDAC6-219ENST00000476625 DBF4Q9UBU7 674 aaPredicted RBP15.6■□□□□ 0.09
HDAC6-219ENST00000476625 ADAMTS8Q9UP79 889 aa15.6■□□□□ 0.09
HDAC6-219ENST00000476625 VIL1P09327 827 aaKnown RBP15.59■□□□□ 0.09
HDAC6-219ENST00000476625 SCARF1Q14162 830 aa15.59■□□□□ 0.09
HDAC6-219ENST00000476625 RUNDC1Q96C34 613 aa15.59■□□□□ 0.09
HDAC6-219ENST00000476625 EYA3Q99504 573 aa15.59■□□□□ 0.09
HDAC6-219ENST00000476625 RPS12P25398 132 aaKnown RBP15.58■□□□□ 0.08
HDAC6-219ENST00000476625 DDX10Q13206 875 aaKnown RBP15.58■□□□□ 0.08
HDAC6-219ENST00000476625 RIC3Q7Z5B4 369 aa15.58■□□□□ 0.08
HDAC6-219ENST00000476625 ZC3H12CQ9C0D7 883 aaKnown RBP15.58■□□□□ 0.08
HDAC6-219ENST00000476625 ANKIB1Q9P2G1 1089 aa15.58■□□□□ 0.08
HDAC6-219ENST00000476625 RALBP1Q15311 655 aa15.57■□□□□ 0.08
HDAC6-219ENST00000476625 SULF1Q8IWU6 871 aa15.57■□□□□ 0.08
HDAC6-219ENST00000476625 ZBTB38Q8NAP3 1195 aaPredicted RBP15.57■□□□□ 0.08
HDAC6-219ENST00000476625 HYPKQ9NX55 129 aa15.57■□□□□ 0.08
HDAC6-219ENST00000476625 GGA1Q9UJY5 639 aa15.57■□□□□ 0.08
HDAC6-219ENST00000476625 MYBBP1AQ9BQG0 1328 aaKnown RBP15.57■□□□□ 0.08
HDAC6-219ENST00000476625 A0A1B0GUL6 1792 aa15.57■□□□□ 0.08
HDAC6-219ENST00000476625 G3V3G9 751 aa15.56■□□□□ 0.08
HDAC6-219ENST00000476625 ZNF280AP59817 542 aaPredicted RBP15.56■□□□□ 0.08
HDAC6-219ENST00000476625 MKRN3Q13064 507 aaKnown RBP15.56■□□□□ 0.08
HDAC6-219ENST00000476625 DCAF8Q5TAQ9 597 aa15.56■□□□□ 0.08
HDAC6-219ENST00000476625 RSBN1LQ6PCB5 846 aaPredicted RBP15.56■□□□□ 0.08
HDAC6-219ENST00000476625 PODXL2Q9NZ53 605 aa15.56■□□□□ 0.08
HDAC6-219ENST00000476625 UBE2Q2LH0YL09 131 aa15.55■□□□□ 0.08
HDAC6-219ENST00000476625 HOXB7P09629 217 aa15.55■□□□□ 0.08
HDAC6-219ENST00000476625 C8orf58Q8NAV2 365 aa15.55■□□□□ 0.08
HDAC6-219ENST00000476625 CCDC102AQ96A19 550 aa15.55■□□□□ 0.08
HDAC6-219ENST00000476625 GMLQ99445 158 aa15.55■□□□□ 0.08
HDAC6-219ENST00000476625 MYOZ2Q9NPC6 264 aa15.55■□□□□ 0.08
HDAC6-219ENST00000476625 SAGE1Q9NXZ1 904 aa15.55■□□□□ 0.08
HDAC6-219ENST00000476625 FZD1Q9UP38 647 aa15.55■□□□□ 0.08
HDAC6-219ENST00000476625 TBC1D8O95759 1140 aa15.54■□□□□ 0.08
HDAC6-219ENST00000476625 ZNF853P0CG23 659 aa15.54■□□□□ 0.08
HDAC6-219ENST00000476625 GOLGA2Q08379 1002 aa15.54■□□□□ 0.08
HDAC6-219ENST00000476625 TRIM28Q13263 835 aaKnown RBP15.54■□□□□ 0.08
HDAC6-219ENST00000476625 WDR43Q15061 677 aaKnown RBP eCLIP15.54■□□□□ 0.08
HDAC6-219ENST00000476625 NBPF9Q3BBW0 867 aa15.54■□□□□ 0.08
HDAC6-219ENST00000476625 FBXW7Q969H0 707 aa15.54■□□□□ 0.08
HDAC6-219ENST00000476625 PDE8AO60658 829 aa15.53■□□□□ 0.08
HDAC6-219ENST00000476625 KLRK1P26718 216 aa15.53■□□□□ 0.08
HDAC6-219ENST00000476625 TSPYL6Q8N831 410 aa15.53■□□□□ 0.08
HDAC6-219ENST00000476625 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.53■□□□□ 0.08
HDAC6-219ENST00000476625 ZNF609O15014 1411 aa15.52■□□□□ 0.08
HDAC6-219ENST00000476625 APAF1O14727 1248 aa15.52■□□□□ 0.08
HDAC6-219ENST00000476625 SASH1O94885 1247 aa15.52■□□□□ 0.08
HDAC6-219ENST00000476625 PCCAP05165 728 aaPredicted RBP15.52■□□□□ 0.08
HDAC6-219ENST00000476625 USP17L8P0C7I0 530 aa15.52■□□□□ 0.08
HDAC6-219ENST00000476625 PRKG1Q13976 671 aa15.52■□□□□ 0.08
HDAC6-219ENST00000476625 CCDC152Q4G0S7 254 aa15.52■□□□□ 0.08
HDAC6-219ENST00000476625 TXNRD3Q86VQ6 643 aa15.52■□□□□ 0.08
HDAC6-219ENST00000476625 R3HDMLQ9H3Y0 253 aa15.52■□□□□ 0.08
HDAC6-219ENST00000476625 XDHP47989 1333 aa15.51■□□□□ 0.07
HDAC6-219ENST00000476625 IGKV5-2P06315 115 aa15.51■□□□□ 0.07
HDAC6-219ENST00000476625 CTU1Q7Z7A3 348 aaKnown RBP15.51■□□□□ 0.07
HDAC6-219ENST00000476625 ANKRD18AQ8IVF6 992 aa15.51■□□□□ 0.07
HDAC6-219ENST00000476625 AGBL3Q8NEM8 1001 aa15.51■□□□□ 0.07
HDAC6-219ENST00000476625 GREM2Q9H772 168 aa15.51■□□□□ 0.07
HDAC6-219ENST00000476625 CWC25Q9NXE8 425 aaPredicted RBP15.51■□□□□ 0.07
HDAC6-219ENST00000476625 HPS5Q9UPZ3 1129 aa15.51■□□□□ 0.07
HDAC6-219ENST00000476625 MAP3K2Q9Y2U5 619 aa15.51■□□□□ 0.07
HDAC6-219ENST00000476625 USP17L3A6NCW0 530 aa15.5■□□□□ 0.07
HDAC6-219ENST00000476625 USP17L4A6NCW7 530 aa15.5■□□□□ 0.07
HDAC6-219ENST00000476625 CWF19L2Q2TBE0 894 aaKnown RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms