RNA–Protein interactions for RNA: ENST00000475818.5

HDAC11-217, Transcript of histone deacetylase 11, humanhuman

TSL 3

Gene HDAC11, Length 1,271 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-217ENST00000475818 TCIRG1Q13488 830 aa26.67■■□□□ 1.86
HDAC11-217ENST00000475818 PKN2Q16513 984 aaKnown RBP26.67■■□□□ 1.86
HDAC11-217ENST00000475818 ANGEL2Q5VTE6 544 aaKnown RBP26.66■■□□□ 1.86
HDAC11-217ENST00000475818 MOB2Q70IA6 237 aa26.65■■□□□ 1.86
HDAC11-217ENST00000475818 EYA3Q99504 573 aa26.65■■□□□ 1.86
HDAC11-217ENST00000475818 SCARF1Q14162 830 aa26.64■■□□□ 1.86
HDAC11-217ENST00000475818 PLEKHF1Q96S99 279 aa26.64■■□□□ 1.86
HDAC11-217ENST00000475818 VIL1P09327 827 aaKnown RBP26.63■■□□□ 1.85
HDAC11-217ENST00000475818 COL4A1P02462 1669 aa26.63■■□□□ 1.85
HDAC11-217ENST00000475818 TBC1D16Q8TBP0 767 aa26.62■■□□□ 1.85
HDAC11-217ENST00000475818 SCAF8Q9UPN6 1271 aaKnown RBP26.62■■□□□ 1.85
HDAC11-217ENST00000475818 GCC1Q96CN9 775 aa26.61■■□□□ 1.85
HDAC11-217ENST00000475818 FAM89AQ96GI7 184 aa26.61■■□□□ 1.85
HDAC11-217ENST00000475818 G3V3G9 751 aa26.6■■□□□ 1.85
HDAC11-217ENST00000475818 UBE2Q2LH0YL09 131 aa26.6■■□□□ 1.85
HDAC11-217ENST00000475818 FKBP1BP68106 108 aa26.6■■□□□ 1.85
HDAC11-217ENST00000475818 DCAF8Q5TAQ9 597 aa26.6■■□□□ 1.85
HDAC11-217ENST00000475818 ZC3H12CQ9C0D7 883 aaKnown RBP26.6■■□□□ 1.85
HDAC11-217ENST00000475818 SF3B3Q15393 1217 aaKnown RBP26.59■■□□□ 1.85
HDAC11-217ENST00000475818 RTL5Q5HYW3 569 aaPredicted RBP26.59■■□□□ 1.85
HDAC11-217ENST00000475818 MAPK8IP3Q9UPT6 1336 aa26.59■■□□□ 1.85
HDAC11-217ENST00000475818 PAPPA2Q9BXP8 1791 aa26.58■■□□□ 1.85
HDAC11-217ENST00000475818 GPR25O00155 361 aa26.58■■□□□ 1.85
HDAC11-217ENST00000475818 ZNF280AP59817 542 aaPredicted RBP26.58■■□□□ 1.85
HDAC11-217ENST00000475818 MKRN3Q13064 507 aaKnown RBP26.58■■□□□ 1.85
HDAC11-217ENST00000475818 FBXO46Q6PJ61 603 aaPredicted RBP26.58■■□□□ 1.85
HDAC11-217ENST00000475818 DDX60Q8IY21 1712 aaKnown RBP26.58■■□□□ 1.85
HDAC11-217ENST00000475818 PRAMEF18Q5VWM3 479 aa26.57■■□□□ 1.84
HDAC11-217ENST00000475818 SCN9AQ15858 1988 aa26.57■■□□□ 1.84
HDAC11-217ENST00000475818 UFL1O94874 794 aa26.56■■□□□ 1.84
HDAC11-217ENST00000475818 HABP4Q5JVS0 413 aaKnown RBP26.56■■□□□ 1.84
HDAC11-217ENST00000475818 RSBN1LQ6PCB5 846 aaPredicted RBP26.56■■□□□ 1.84
HDAC11-217ENST00000475818 ATP5J2-PTCD1G3V325 749 aa26.55■■□□□ 1.84
HDAC11-217ENST00000475818 TTLL12Q14166 644 aaPredicted RBP26.55■■□□□ 1.84
HDAC11-217ENST00000475818 RPS8P62241 208 aaKnown RBP26.54■■□□□ 1.84
HDAC11-217ENST00000475818 AGBL3Q8NEM8 1001 aa26.54■■□□□ 1.84
HDAC11-217ENST00000475818 MYOZ2Q9NPC6 264 aa26.54■■□□□ 1.84
HDAC11-217ENST00000475818 ANKIB1Q9P2G1 1089 aa26.53■■□□□ 1.84
HDAC11-217ENST00000475818 FKTNO75072 461 aa26.52■■□□□ 1.84
HDAC11-217ENST00000475818 USP17L8P0C7I0 530 aa26.52■■□□□ 1.84
HDAC11-217ENST00000475818 TM4SF4P48230 202 aa26.52■■□□□ 1.84
HDAC11-217ENST00000475818 KRT24Q2M2I5 525 aa26.52■■□□□ 1.84
HDAC11-217ENST00000475818 ISCA1Q9BUE6 129 aa26.52■■□□□ 1.84
HDAC11-217ENST00000475818 R3HDMLQ9H3Y0 253 aa26.52■■□□□ 1.84
HDAC11-217ENST00000475818 CHPF2Q9P2E5 772 aa26.52■■□□□ 1.84
HDAC11-217ENST00000475818 PITPNM2Q9BZ72 1349 aa26.51■■□□□ 1.83
HDAC11-217ENST00000475818 PLBD2Q8NHP8 589 aa26.51■■□□□ 1.83
HDAC11-217ENST00000475818 SEC31BQ9NQW1 1179 aa26.51■■□□□ 1.83
HDAC11-217ENST00000475818 PODXL2Q9NZ53 605 aa26.51■■□□□ 1.83
HDAC11-217ENST00000475818 GGA1Q9UJY5 639 aa26.51■■□□□ 1.83
HDAC11-217ENST00000475818 IRS4O14654 1257 aaPredicted RBP26.5■■□□□ 1.83
HDAC11-217ENST00000475818 RIPK4P57078 832 aa26.5■■□□□ 1.83
HDAC11-217ENST00000475818 ZNF609O15014 1411 aa26.49■■□□□ 1.83
HDAC11-217ENST00000475818 NOM1Q5C9Z4 860 aaKnown RBP26.49■■□□□ 1.83
HDAC11-217ENST00000475818 GMLQ99445 158 aa26.49■■□□□ 1.83
HDAC11-217ENST00000475818 NBPF9Q3BBW0 867 aa26.48■■□□□ 1.83
HDAC11-217ENST00000475818 ANKRD13DQ6ZTN6 518 aa26.48■■□□□ 1.83
HDAC11-217ENST00000475818 PNNQ9H307 717 aaKnown RBP26.48■■□□□ 1.83
HDAC11-217ENST00000475818 BABAM1Q9NWV8 329 aa26.48■■□□□ 1.83
HDAC11-217ENST00000475818 SREBF2Q12772 1141 aa26.47■■□□□ 1.83
HDAC11-217ENST00000475818 POTEFA5A3E0 1075 aa26.46■■□□□ 1.83
HDAC11-217ENST00000475818 PRKG1Q13976 671 aa26.46■■□□□ 1.83
HDAC11-217ENST00000475818 USP17L3A6NCW0 530 aa26.44■■□□□ 1.82
HDAC11-217ENST00000475818 USP17L4A6NCW7 530 aa26.44■■□□□ 1.82
HDAC11-217ENST00000475818 NF2P35240 595 aa26.44■■□□□ 1.82
HDAC11-217ENST00000475818 USP17L1Q7RTZ2 530 aa26.44■■□□□ 1.82
HDAC11-217ENST00000475818 PTPN12Q05209 780 aaKnown RBP26.43■■□□□ 1.82
HDAC11-217ENST00000475818 HDGFL1Q5TGJ6 251 aa26.43■■□□□ 1.82
HDAC11-217ENST00000475818 CCDC85AQ96PX6 553 aaPredicted RBP26.43■■□□□ 1.82
HDAC11-217ENST00000475818 MXD3Q9BW11 206 aa26.43■■□□□ 1.82
HDAC11-217ENST00000475818 TRIM17Q9Y577 477 aa26.43■■□□□ 1.82
HDAC11-217ENST00000475818 CFHR5Q9BXR6 569 aa26.42■■□□□ 1.82
HDAC11-217ENST00000475818 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.42■■□□□ 1.82
HDAC11-217ENST00000475818 LAS1LQ9Y4W2 734 aaKnown RBP26.42■■□□□ 1.82
HDAC11-217ENST00000475818 FBXW7Q969H0 707 aa26.4■■□□□ 1.82
HDAC11-217ENST00000475818 XDHP47989 1333 aa26.39■■□□□ 1.82
HDAC11-217ENST00000475818 SASH1O94885 1247 aa26.39■■□□□ 1.82
HDAC11-217ENST00000475818 OTOP1Q7RTM1 612 aa26.39■■□□□ 1.82
HDAC11-217ENST00000475818 ARMC9Q7Z3E5 817 aa26.39■■□□□ 1.82
HDAC11-217ENST00000475818 WTIPA6NIX2 430 aaPredicted RBP26.38■■□□□ 1.81
HDAC11-217ENST00000475818 WNT10BO00744 389 aa26.38■■□□□ 1.81
HDAC11-217ENST00000475818 TMPOP42166 694 aaKnown RBP26.38■■□□□ 1.81
HDAC11-217ENST00000475818 FXR1P51114 621 aaKnown RBP eCLIP26.38■■□□□ 1.81
HDAC11-217ENST00000475818 LMOD3Q0VAK6 560 aa26.38■■□□□ 1.81
HDAC11-217ENST00000475818 TRIM28Q13263 835 aaKnown RBP26.38■■□□□ 1.81
HDAC11-217ENST00000475818 CCDC152Q4G0S7 254 aa26.38■■□□□ 1.81
HDAC11-217ENST00000475818 SPRYD7Q5W111 196 aa26.38■■□□□ 1.81
HDAC11-217ENST00000475818 PODNQ7Z5L7 613 aa26.38■■□□□ 1.81
HDAC11-217ENST00000475818 ZBTB38Q8NAP3 1195 aaPredicted RBP26.38■■□□□ 1.81
HDAC11-217ENST00000475818 JARID2Q92833 1246 aaPredicted RBP26.38■■□□□ 1.81
HDAC11-217ENST00000475818 DBF4Q9UBU7 674 aaPredicted RBP26.38■■□□□ 1.81
HDAC11-217ENST00000475818 PSME4Q14997 1843 aa26.37■■□□□ 1.81
HDAC11-217ENST00000475818 ATP2B4P23634 1241 aa26.37■■□□□ 1.81
HDAC11-217ENST00000475818 INTS3Q68E01 1043 aaKnown RBP26.37■■□□□ 1.81
HDAC11-217ENST00000475818 FZD1Q9UP38 647 aa26.37■■□□□ 1.81
HDAC11-217ENST00000475818 CHL1O00533 1208 aa26.36■■□□□ 1.81
HDAC11-217ENST00000475818 OGFOD1Q8N543 542 aa26.36■■□□□ 1.81
HDAC11-217ENST00000475818 ANGEL1Q9UNK9 670 aaKnown RBP26.36■■□□□ 1.81
HDAC11-217ENST00000475818 ALDH1A1P00352 501 aa26.35■■□□□ 1.81
HDAC11-217ENST00000475818 NEUROD2Q15784 382 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms