RNA–Protein interactions for RNA: ENST00000475795.5

UBE4B-208, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-208ENST00000475795 ATP5J2-PTCD1G3V325 749 aa9.35□□□□□ -0.91
UBE4B-208ENST00000475795 RAD17O75943 681 aa9.35□□□□□ -0.91
UBE4B-208ENST00000475795 ZNF853P0CG23 659 aa9.35□□□□□ -0.91
UBE4B-208ENST00000475795 HSPA8P11142 646 aaKnown RBP9.35□□□□□ -0.91
UBE4B-208ENST00000475795 ECE1P42892 770 aa9.35□□□□□ -0.91
UBE4B-208ENST00000475795 MAP2K1Q02750 393 aaPredicted RBP9.35□□□□□ -0.91
UBE4B-208ENST00000475795 CELF1Q92879 486 aaKnown RBP9.35□□□□□ -0.91
UBE4B-208ENST00000475795 ZNF428Q96B54 188 aa9.35□□□□□ -0.91
UBE4B-208ENST00000475795 FAM89AQ96GI7 184 aa9.35□□□□□ -0.91
UBE4B-208ENST00000475795 BCL2L13Q9BXK5 485 aa9.35□□□□□ -0.91
UBE4B-208ENST00000475795 PRKRIP1Q9H875 184 aaPredicted RBP9.35□□□□□ -0.91
UBE4B-208ENST00000475795 PGAP2Q9UHJ9 254 aa9.35□□□□□ -0.91
UBE4B-208ENST00000475795 TLL2Q9Y6L7 1015 aa9.35□□□□□ -0.91
UBE4B-208ENST00000475795 LBX1P52954 281 aa9.34□□□□□ -0.91
UBE4B-208ENST00000475795 TRIM28Q13263 835 aaKnown RBP9.34□□□□□ -0.91
UBE4B-208ENST00000475795 CYP4F22Q6NT55 531 aa9.34□□□□□ -0.91
UBE4B-208ENST00000475795 PAXIP1Q6ZW49 1069 aaPredicted RBP9.34□□□□□ -0.91
UBE4B-208ENST00000475795 ZC3H15Q8WU90 426 aaKnown RBP9.34□□□□□ -0.91
UBE4B-208ENST00000475795 CAPNS2Q96L46 248 aa9.34□□□□□ -0.91
UBE4B-208ENST00000475795 IFT57Q9NWB7 429 aa9.34□□□□□ -0.91
UBE4B-208ENST00000475795 IRS4O14654 1257 aaPredicted RBP9.33□□□□□ -0.92
UBE4B-208ENST00000475795 APAF1O14727 1248 aa9.33□□□□□ -0.92
UBE4B-208ENST00000475795 CELF2O95319 508 aaKnown RBP9.33□□□□□ -0.92
UBE4B-208ENST00000475795 HIRAP54198 1017 aaPredicted RBP9.33□□□□□ -0.92
UBE4B-208ENST00000475795 GPSM2P81274 684 aa9.33□□□□□ -0.92
UBE4B-208ENST00000475795 GOLGA2Q08379 1002 aa9.33□□□□□ -0.92
UBE4B-208ENST00000475795 WASHC4Q2M389 1173 aa9.33□□□□□ -0.92
UBE4B-208ENST00000475795 ZBTB38Q8NAP3 1195 aaPredicted RBP9.33□□□□□ -0.92
UBE4B-208ENST00000475795 TRPM4Q8TD43 1214 aa9.33□□□□□ -0.92
UBE4B-208ENST00000475795 GLIS2Q9BZE0 524 aaPredicted RBP9.33□□□□□ -0.92
UBE4B-208ENST00000475795 POLLQ9UGP5 575 aa9.33□□□□□ -0.92
UBE4B-208ENST00000475795 CNOT7Q9UIV1 285 aaKnown RBP9.33□□□□□ -0.92
UBE4B-208ENST00000475795 NSFL1CQ9UNZ2 370 aaKnown RBP9.33□□□□□ -0.92
UBE4B-208ENST00000475795 CACNA1FO60840 1977 aa9.33□□□□□ -0.92
UBE4B-208ENST00000475795 SPEF2Q9C093 1822 aa9.33□□□□□ -0.92
UBE4B-208ENST00000475795 CASP8AP2Q9UKL3 1982 aa9.32□□□□□ -0.92
UBE4B-208ENST00000475795 SHTN1A0MZ66 631 aa9.32□□□□□ -0.92
UBE4B-208ENST00000475795 C6orf229H3BNL8 230 aa9.32□□□□□ -0.92
UBE4B-208ENST00000475795 H7C1D1 291 aa9.32□□□□□ -0.92
UBE4B-208ENST00000475795 PSMD14O00487 310 aa9.32□□□□□ -0.92
UBE4B-208ENST00000475795 GABBR2O75899 941 aa9.32□□□□□ -0.92
UBE4B-208ENST00000475795 GNAI1P63096 354 aa9.32□□□□□ -0.92
UBE4B-208ENST00000475795 CALD1Q05682 793 aaKnown RBP9.32□□□□□ -0.92
UBE4B-208ENST00000475795 GRM1Q13255 1194 aa9.32□□□□□ -0.92
UBE4B-208ENST00000475795 RTL5Q5HYW3 569 aaPredicted RBP9.32□□□□□ -0.92
UBE4B-208ENST00000475795 RIC3Q7Z5B4 369 aa9.32□□□□□ -0.92
UBE4B-208ENST00000475795 SAPCD2Q86UD0 394 aa9.32□□□□□ -0.92
UBE4B-208ENST00000475795 MICALL2Q8IY33 904 aa9.32□□□□□ -0.92
UBE4B-208ENST00000475795 DPF2Q92785 391 aa9.32□□□□□ -0.92
UBE4B-208ENST00000475795 HHIPL1Q96JK4 782 aa9.32□□□□□ -0.92
UBE4B-208ENST00000475795 GPR101Q96P66 508 aaPredicted RBP9.32□□□□□ -0.92
UBE4B-208ENST00000475795 EYA3Q99504 573 aa9.32□□□□□ -0.92
UBE4B-208ENST00000475795 PHAXQ9H814 394 aaKnown RBP9.32□□□□□ -0.92
UBE4B-208ENST00000475795 DBNDD1Q9H9R9 158 aa9.32□□□□□ -0.92
UBE4B-208ENST00000475795 PCDHB13Q9Y5F0 798 aa9.32□□□□□ -0.92
UBE4B-208ENST00000475795 RIMBP2O15034 1052 aa9.31□□□□□ -0.92
UBE4B-208ENST00000475795 MAP3K13O43283 966 aa9.31□□□□□ -0.92
UBE4B-208ENST00000475795 ECE2O60344 883 aa9.31□□□□□ -0.92
UBE4B-208ENST00000475795 HSP90B1P14625 803 aaKnown RBP9.31□□□□□ -0.92
UBE4B-208ENST00000475795 RPS12P25398 132 aaKnown RBP9.31□□□□□ -0.92
UBE4B-208ENST00000475795 MAP2K2P36507 400 aa9.31□□□□□ -0.92
UBE4B-208ENST00000475795 RPS8P62241 208 aaKnown RBP9.31□□□□□ -0.92
UBE4B-208ENST00000475795 CDC37L1Q7L3B6 337 aa9.31□□□□□ -0.92
UBE4B-208ENST00000475795 CCDC191Q8NCU4 936 aa9.31□□□□□ -0.92
UBE4B-208ENST00000475795 TBC1D16Q8TBP0 767 aa9.31□□□□□ -0.92
UBE4B-208ENST00000475795 MYD88Q99836 296 aa9.31□□□□□ -0.92
UBE4B-208ENST00000475795 BEGAINQ9BUH8 593 aa9.31□□□□□ -0.92
UBE4B-208ENST00000475795 PODXL2Q9NZ53 605 aa9.31□□□□□ -0.92
UBE4B-208ENST00000475795 RTL9Q8NET4 1388 aa9.31□□□□□ -0.92
UBE4B-208ENST00000475795 AKAP11Q9UKA4 1901 aa9.31□□□□□ -0.92
UBE4B-208ENST00000475795 ELL2O00472 640 aaPredicted RBP9.3□□□□□ -0.92
UBE4B-208ENST00000475795 AOC2O75106 756 aa9.3□□□□□ -0.92
UBE4B-208ENST00000475795 ECM2O94769 699 aaPredicted RBP9.3□□□□□ -0.92
UBE4B-208ENST00000475795 PCCAP05165 728 aaPredicted RBP9.3□□□□□ -0.92
UBE4B-208ENST00000475795 SAMD7Q7Z3H4 446 aa9.3□□□□□ -0.92
UBE4B-208ENST00000475795 C8orf58Q8NAV2 365 aa9.3□□□□□ -0.92
UBE4B-208ENST00000475795 KIF12Q96FN5 646 aa9.3□□□□□ -0.92
UBE4B-208ENST00000475795 ZNF408Q9H9D4 720 aa9.3□□□□□ -0.92
UBE4B-208ENST00000475795 SEC31BQ9NQW1 1179 aa9.3□□□□□ -0.92
UBE4B-208ENST00000475795 ZNF646O15015 1829 aaPredicted RBP9.29□□□□□ -0.92
UBE4B-208ENST00000475795 GALR2O43603 387 aaPredicted RBP9.29□□□□□ -0.92
UBE4B-208ENST00000475795 PDE8AO60658 829 aa9.29□□□□□ -0.92
UBE4B-208ENST00000475795 DDX58O95786 925 aaKnown RBP9.29□□□□□ -0.92
UBE4B-208ENST00000475795 EGFRP00533 1210 aa9.29□□□□□ -0.92
UBE4B-208ENST00000475795 DOK7Q18PE1 504 aa9.29□□□□□ -0.92
UBE4B-208ENST00000475795 CCDC152Q4G0S7 254 aa9.29□□□□□ -0.92
UBE4B-208ENST00000475795 TBC1D10BQ4KMP7 808 aaPredicted RBP9.29□□□□□ -0.92
UBE4B-208ENST00000475795 CCDC30Q5VVM6 783 aa9.29□□□□□ -0.92
UBE4B-208ENST00000475795 USP48Q86UV5 1035 aa9.29□□□□□ -0.92
UBE4B-208ENST00000475795 MS4A3Q96HJ5 214 aa9.29□□□□□ -0.92
UBE4B-208ENST00000475795 METTL22Q9BUU2 404 aaPredicted RBP9.29□□□□□ -0.92
UBE4B-208ENST00000475795 CHMP4AQ9BY43 222 aa9.29□□□□□ -0.92
UBE4B-208ENST00000475795 KCNQ5Q9NR82 932 aa9.29□□□□□ -0.92
UBE4B-208ENST00000475795 CWC25Q9NXE8 425 aaPredicted RBP9.29□□□□□ -0.92
UBE4B-208ENST00000475795 GGA1Q9UJY5 639 aa9.29□□□□□ -0.92
UBE4B-208ENST00000475795 ZNF609O15014 1411 aa9.29□□□□□ -0.92
UBE4B-208ENST00000475795 CA12O43570 354 aa9.28□□□□□ -0.92
UBE4B-208ENST00000475795 UFL1O94874 794 aa9.28□□□□□ -0.92
UBE4B-208ENST00000475795 VIL1P09327 827 aaKnown RBP9.28□□□□□ -0.92
UBE4B-208ENST00000475795 BRPF1P55201 1214 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms