RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 CCDC93Q567U6 631 aa27.6■■■□□ 2.01
MCF2L2-209ENST00000475664 PUS3Q9BZE2 481 aaKnown RBP27.6■■■□□ 2.01
MCF2L2-209ENST00000475664 GOLGB1Q14789 3259 aaKnown RBP27.59■■■□□ 2.01
MCF2L2-209ENST00000475664 CNNM1Q9NRU3 951 aa27.59■■■□□ 2.01
MCF2L2-209ENST00000475664 FBXO3Q9UK99 471 aa27.59■■■□□ 2.01
MCF2L2-209ENST00000475664 MINPP1Q9UNW1 487 aa27.59■■■□□ 2.01
MCF2L2-209ENST00000475664 DUOX1Q9NRD9 1551 aa27.58■■■□□ 2.01
MCF2L2-209ENST00000475664 LRRC24Q50LG9 513 aa27.58■■■□□ 2.01
MCF2L2-209ENST00000475664 TMX4Q9H1E5 349 aaPredicted RBP27.58■■■□□ 2.01
MCF2L2-209ENST00000475664 RIPOR2Q9Y4F9 1068 aa27.58■■■□□ 2.01
MCF2L2-209ENST00000475664 EYA2O00167 538 aa27.57■■■□□ 2
MCF2L2-209ENST00000475664 GRIPAP1Q4V328 841 aa27.57■■■□□ 2
MCF2L2-209ENST00000475664 HMMRO75330 724 aa27.56■■■□□ 2
MCF2L2-209ENST00000475664 CIAO1O76071 339 aa27.56■■■□□ 2
MCF2L2-209ENST00000475664 GPSM2P81274 684 aa27.56■■■□□ 2
MCF2L2-209ENST00000475664 CHRNDQ07001 517 aa27.56■■■□□ 2
MCF2L2-209ENST00000475664 ATG9AQ7Z3C6 839 aa27.56■■■□□ 2
MCF2L2-209ENST00000475664 RTKN2Q8IZC4 609 aa27.56■■■□□ 2
MCF2L2-209ENST00000475664 SIL1Q9H173 461 aa27.56■■■□□ 2
MCF2L2-209ENST00000475664 PODXL2Q9NZ53 605 aa27.55■■■□□ 2
MCF2L2-209ENST00000475664 NFKBIEO00221 500 aa27.54■■■□□ 2
MCF2L2-209ENST00000475664 MPNDQ8N594 471 aa27.54■■■□□ 2
MCF2L2-209ENST00000475664 NOP58Q9Y2X3 529 aaKnown RBP27.54■■■□□ 2
MCF2L2-209ENST00000475664 XDHP47989 1333 aa27.53■■■□□ 2
MCF2L2-209ENST00000475664 MROH5Q6ZUA9 1318 aa27.53■■■□□ 2
MCF2L2-209ENST00000475664 GRIN3BO60391 1043 aa27.53■■■□□ 2
MCF2L2-209ENST00000475664 ANKRD2Q9GZV1 360 aa27.53■■■□□ 2
MCF2L2-209ENST00000475664 NSFL1CQ9UNZ2 370 aaKnown RBP27.53■■■□□ 2
MCF2L2-209ENST00000475664 LTBP3Q9NS15 1303 aa27.52■■■□□ 2
MCF2L2-209ENST00000475664 NEFLP07196 543 aa27.52■■■□□ 2
MCF2L2-209ENST00000475664 IL15P40933 162 aaPredicted RBP27.52■■■□□ 2
MCF2L2-209ENST00000475664 DPP8Q6V1X1 898 aaPredicted RBP27.52■■■□□ 2
MCF2L2-209ENST00000475664 ARHGAP27Q6ZUM4 889 aa27.52■■■□□ 2
MCF2L2-209ENST00000475664 PSMD1Q99460 953 aa27.52■■■□□ 2
MCF2L2-209ENST00000475664 RTFDC1Q9BY42 306 aaPredicted RBP27.52■■■□□ 2
MCF2L2-209ENST00000475664 ANKIB1Q9P2G1 1089 aa27.52■■■□□ 2
MCF2L2-209ENST00000475664 SURF6O75683 361 aaKnown RBP27.51■■□□□ 1.99
MCF2L2-209ENST00000475664 FKBP4Q02790 459 aaKnown RBP eCLIP27.51■■□□□ 1.99
MCF2L2-209ENST00000475664 HELBQ8NG08 1087 aaPredicted RBP27.51■■□□□ 1.99
MCF2L2-209ENST00000475664 TAOK3Q9H2K8 898 aa27.51■■□□□ 1.99
MCF2L2-209ENST00000475664 SBF1O95248 1867 aa27.51■■□□□ 1.99
MCF2L2-209ENST00000475664 METTL24Q5JXM2 366 aa27.5■■□□□ 1.99
MCF2L2-209ENST00000475664 VGLL2Q8N8G2 317 aa27.5■■□□□ 1.99
MCF2L2-209ENST00000475664 CCDC88AQ3V6T2 1871 aa27.5■■□□□ 1.99
MCF2L2-209ENST00000475664 TAF5LO75529 589 aa27.49■■□□□ 1.99
MCF2L2-209ENST00000475664 RASSF7Q02833 373 aa27.49■■□□□ 1.99
MCF2L2-209ENST00000475664 G3BP1Q13283 466 aaKnown RBP eCLIP27.49■■□□□ 1.99
MCF2L2-209ENST00000475664 TBC1D16Q8TBP0 767 aa27.49■■□□□ 1.99
MCF2L2-209ENST00000475664 POLLQ9UGP5 575 aa27.49■■□□□ 1.99
MCF2L2-209ENST00000475664 ATP2B4P23634 1241 aa27.48■■□□□ 1.99
MCF2L2-209ENST00000475664 GGA1Q9UJY5 639 aa27.48■■□□□ 1.99
MCF2L2-209ENST00000475664 EXOC6BQ9Y2D4 811 aa27.48■■□□□ 1.99
MCF2L2-209ENST00000475664 LEMD3Q9Y2U8 911 aa27.48■■□□□ 1.99
MCF2L2-209ENST00000475664 DCAF8L1A6NGE4 600 aa27.47■■□□□ 1.99
MCF2L2-209ENST00000475664 UFL1O94874 794 aa27.47■■□□□ 1.99
MCF2L2-209ENST00000475664 PDE8BO95263 885 aa27.47■■□□□ 1.99
MCF2L2-209ENST00000475664 HDAC1Q13547 482 aaPredicted RBP27.47■■□□□ 1.99
MCF2L2-209ENST00000475664 SUPT20HQ8NEM7 779 aa27.47■■□□□ 1.99
MCF2L2-209ENST00000475664 WTIPA6NIX2 430 aaPredicted RBP27.46■■□□□ 1.99
MCF2L2-209ENST00000475664 SASH1O94885 1247 aa27.46■■□□□ 1.99
MCF2L2-209ENST00000475664 DICER1Q9UPY3 1922 aaKnown RBP27.45■■□□□ 1.99
MCF2L2-209ENST00000475664 ZNF804BA4D1E1 1349 aa27.45■■□□□ 1.99
MCF2L2-209ENST00000475664 C6orf229H3BNL8 230 aa27.45■■□□□ 1.98
MCF2L2-209ENST00000475664 SNAP23O00161 211 aa27.45■■□□□ 1.98
MCF2L2-209ENST00000475664 PRELPP51888 382 aa27.45■■□□□ 1.98
MCF2L2-209ENST00000475664 OS9Q13438 667 aaPredicted RBP27.45■■□□□ 1.98
MCF2L2-209ENST00000475664 HSP90AB4PQ58FF6 505 aa27.45■■□□□ 1.98
MCF2L2-209ENST00000475664 CEP126Q9P2H0 1117 aa27.45■■□□□ 1.98
MCF2L2-209ENST00000475664 TFCP2Q12800 502 aa27.44■■□□□ 1.98
MCF2L2-209ENST00000475664 GPR101Q96P66 508 aaPredicted RBP27.44■■□□□ 1.98
MCF2L2-209ENST00000475664 DCTPP1Q9H773 170 aa27.44■■□□□ 1.98
MCF2L2-209ENST00000475664 ZNF277Q9NRM2 450 aaPredicted RBP27.44■■□□□ 1.98
MCF2L2-209ENST00000475664 ARAP2Q8WZ64 1704 aa27.44■■□□□ 1.98
MCF2L2-209ENST00000475664 UBE4AQ14139 1066 aa27.43■■□□□ 1.98
MCF2L2-209ENST00000475664 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.43■■□□□ 1.98
MCF2L2-209ENST00000475664 IRS2Q9Y4H2 1338 aa27.42■■□□□ 1.98
MCF2L2-209ENST00000475664 FGFR2P21802 821 aa27.42■■□□□ 1.98
MCF2L2-209ENST00000475664 KCNJ4P48050 445 aa27.42■■□□□ 1.98
MCF2L2-209ENST00000475664 PUM3Q15397 648 aaKnown RBP27.42■■□□□ 1.98
MCF2L2-209ENST00000475664 ERC1Q8IUD2 1116 aa27.42■■□□□ 1.98
MCF2L2-209ENST00000475664 EYA3Q99504 573 aa27.42■■□□□ 1.98
MCF2L2-209ENST00000475664 MED23Q9ULK4 1368 aa27.42■■□□□ 1.98
MCF2L2-209ENST00000475664 COL4A5P29400 1685 aa27.41■■□□□ 1.98
MCF2L2-209ENST00000475664 LMNB1P20700 586 aa27.41■■□□□ 1.98
MCF2L2-209ENST00000475664 IARSP41252 1262 aaKnown RBP27.41■■□□□ 1.98
MCF2L2-209ENST00000475664 VPS33BQ9H267 617 aa27.41■■□□□ 1.98
MCF2L2-209ENST00000475664 RAB11FIP3O75154 756 aa27.4■■□□□ 1.98
MCF2L2-209ENST00000475664 KLRK1P26718 216 aa27.4■■□□□ 1.98
MCF2L2-209ENST00000475664 KIAA2012Q0VF49 1180 aa27.4■■□□□ 1.98
MCF2L2-209ENST00000475664 WASHC4Q2M389 1173 aa27.4■■□□□ 1.98
MCF2L2-209ENST00000475664 C15orf52Q6ZUT6 534 aaKnown RBP27.4■■□□□ 1.98
MCF2L2-209ENST00000475664 RWDD1Q9H446 243 aaPredicted RBP27.4■■□□□ 1.98
MCF2L2-209ENST00000475664 ZNF609O15014 1411 aa27.4■■□□□ 1.98
MCF2L2-209ENST00000475664 TIAM2Q8IVF5 1701 aa27.39■■□□□ 1.98
MCF2L2-209ENST00000475664 PPIP5K2O43314 1243 aa27.39■■□□□ 1.98
MCF2L2-209ENST00000475664 IGHDP01880 384 aa27.39■■□□□ 1.98
MCF2L2-209ENST00000475664 ATP2B3Q16720 1220 aa27.39■■□□□ 1.98
MCF2L2-209ENST00000475664 AOC3Q16853 763 aa27.39■■□□□ 1.98
MCF2L2-209ENST00000475664 CHD4Q14839 1912 aa27.39■■□□□ 1.97
MCF2L2-209ENST00000475664 TXNRD3Q86VQ6 643 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms