RNA–Protein interactions for RNA: ENST00000475663.2

NIPAL3-206, Transcript of NIPA like domain containing 3, humanhuman

TSL 3

Gene NIPAL3, Length 694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-206ENST00000475663 ZNF594Q96JF6 807 aaPredicted RBP16.66■□□□□ 0.26
NIPAL3-206ENST00000475663 GGA1Q9UJY5 639 aa16.66■□□□□ 0.26
NIPAL3-206ENST00000475663 MINPP1Q9UNW1 487 aa16.66■□□□□ 0.26
NIPAL3-206ENST00000475663 PTPRCP08575 1304 aa16.66■□□□□ 0.26
NIPAL3-206ENST00000475663 LRRC37AA6NMS7 1700 aa16.65■□□□□ 0.26
NIPAL3-206ENST00000475663 IGHMBP2P38935 993 aaKnown RBP16.65■□□□□ 0.26
NIPAL3-206ENST00000475663 EPS15P42566 896 aa16.65■□□□□ 0.26
NIPAL3-206ENST00000475663 BSDC1Q9NW68 430 aaPredicted RBP16.65■□□□□ 0.26
NIPAL3-206ENST00000475663 HACL1Q9UJ83 578 aa16.65■□□□□ 0.26
NIPAL3-206ENST00000475663 RTL9Q8NET4 1388 aa16.64■□□□□ 0.26
NIPAL3-206ENST00000475663 EPHX2P34913 555 aa16.64■□□□□ 0.25
NIPAL3-206ENST00000475663 SCNN1DP51172 638 aa16.64■□□□□ 0.25
NIPAL3-206ENST00000475663 SMC1BQ8NDV3 1235 aa16.64■□□□□ 0.25
NIPAL3-206ENST00000475663 KAZALD1Q96I82 304 aa16.64■□□□□ 0.25
NIPAL3-206ENST00000475663 VPS33BQ9H267 617 aa16.64■□□□□ 0.25
NIPAL3-206ENST00000475663 PODXL2Q9NZ53 605 aa16.64■□□□□ 0.25
NIPAL3-206ENST00000475663 TNNQ9UQP3 1299 aa16.64■□□□□ 0.25
NIPAL3-206ENST00000475663 CACNA1FO60840 1977 aa16.64■□□□□ 0.25
NIPAL3-206ENST00000475663 SHTN1A0MZ66 631 aa16.63■□□□□ 0.25
NIPAL3-206ENST00000475663 ANKRD18BA2A2Z9 1011 aa16.63■□□□□ 0.25
NIPAL3-206ENST00000475663 IQCA1LA6NCM1 817 aa16.63■□□□□ 0.25
NIPAL3-206ENST00000475663 SNAP23O00161 211 aa16.63■□□□□ 0.25
NIPAL3-206ENST00000475663 ECE2O60344 883 aa16.63■□□□□ 0.25
NIPAL3-206ENST00000475663 BCAR3O75815 825 aa16.63■□□□□ 0.25
NIPAL3-206ENST00000475663 CT47B1P0C2W7 299 aaPredicted RBP16.63■□□□□ 0.25
NIPAL3-206ENST00000475663 GMPSP49915 693 aaPredicted RBP16.63■□□□□ 0.25
NIPAL3-206ENST00000475663 CIAPIN1Q6FI81 312 aa16.63■□□□□ 0.25
NIPAL3-206ENST00000475663 HELBQ8NG08 1087 aaPredicted RBP16.63■□□□□ 0.25
NIPAL3-206ENST00000475663 EYA3Q99504 573 aa16.63■□□□□ 0.25
NIPAL3-206ENST00000475663 MPHOSPH8Q99549 860 aa16.63■□□□□ 0.25
NIPAL3-206ENST00000475663 ZC3H12CQ9C0D7 883 aaKnown RBP16.63■□□□□ 0.25
NIPAL3-206ENST00000475663 ZBTB12Q9Y330 459 aaPredicted RBP16.63■□□□□ 0.25
NIPAL3-206ENST00000475663 XDHP47989 1333 aa16.63■□□□□ 0.25
NIPAL3-206ENST00000475663 FSTL1Q12841 308 aa16.62■□□□□ 0.25
NIPAL3-206ENST00000475663 IFIT5Q13325 482 aaKnown RBP16.62■□□□□ 0.25
NIPAL3-206ENST00000475663 CLEC11AQ9Y240 323 aa16.62■□□□□ 0.25
NIPAL3-206ENST00000475663 G3V3G9 751 aa16.61■□□□□ 0.25
NIPAL3-206ENST00000475663 PSMD14O00487 310 aa16.61■□□□□ 0.25
NIPAL3-206ENST00000475663 TAF5LO75529 589 aa16.61■□□□□ 0.25
NIPAL3-206ENST00000475663 KLRK1P26718 216 aa16.61■□□□□ 0.25
NIPAL3-206ENST00000475663 LMOD1P29536 600 aaPredicted RBP16.61■□□□□ 0.25
NIPAL3-206ENST00000475663 CCT4P50991 539 aaKnown RBP16.61■□□□□ 0.25
NIPAL3-206ENST00000475663 DCAF8Q5TAQ9 597 aa16.61■□□□□ 0.25
NIPAL3-206ENST00000475663 USP44Q9H0E7 712 aa16.61■□□□□ 0.25
NIPAL3-206ENST00000475663 BICC1Q9H694 974 aaKnown RBP16.61■□□□□ 0.25
NIPAL3-206ENST00000475663 LTBP1Q14766 1721 aa16.6■□□□□ 0.25
NIPAL3-206ENST00000475663 PLIN1O60240 522 aa16.6■□□□□ 0.25
NIPAL3-206ENST00000475663 ATP2B4P23634 1241 aa16.6■□□□□ 0.25
NIPAL3-206ENST00000475663 CHRNDQ07001 517 aa16.6■□□□□ 0.25
NIPAL3-206ENST00000475663 CHADLQ6NUI6 762 aa16.6■□□□□ 0.25
NIPAL3-206ENST00000475663 TXNRD3Q86VQ6 643 aa16.6■□□□□ 0.25
NIPAL3-206ENST00000475663 ANKRD44Q8N8A2 993 aa16.6■□□□□ 0.25
NIPAL3-206ENST00000475663 FRAT1Q92837 279 aaPredicted RBP16.6■□□□□ 0.25
NIPAL3-206ENST00000475663 SPEF2Q9C093 1822 aa16.59■□□□□ 0.25
NIPAL3-206ENST00000475663 TNIP1Q15025 636 aa16.59■□□□□ 0.25
NIPAL3-206ENST00000475663 CCDC57Q2TAC2 916 aa16.59■□□□□ 0.25
NIPAL3-206ENST00000475663 TAF7LQ5H9L4 462 aa16.59■□□□□ 0.25
NIPAL3-206ENST00000475663 MAP1SQ66K74 1059 aaPredicted RBP16.59■□□□□ 0.25
NIPAL3-206ENST00000475663 PUS3Q9BZE2 481 aaKnown RBP16.59■□□□□ 0.25
NIPAL3-206ENST00000475663 GPRC5DQ9NZD1 345 aa16.59■□□□□ 0.25
NIPAL3-206ENST00000475663 UTYO14607 1347 aa16.59■□□□□ 0.25
NIPAL3-206ENST00000475663 BRPF1P55201 1214 aaPredicted RBP16.58■□□□□ 0.24
NIPAL3-206ENST00000475663 LDHDQ86WU2 507 aa16.58■□□□□ 0.24
NIPAL3-206ENST00000475663 KLHDC4Q8TBB5 520 aa16.58■□□□□ 0.24
NIPAL3-206ENST00000475663 CLUAP1Q96AJ1 413 aa16.58■□□□□ 0.24
NIPAL3-206ENST00000475663 API5Q9BZZ5 524 aaKnown RBP16.58■□□□□ 0.24
NIPAL3-206ENST00000475663 ZBED9Q6R2W3 1325 aa16.58■□□□□ 0.24
NIPAL3-206ENST00000475663 MYH3P11055 1940 aa16.58■□□□□ 0.24
NIPAL3-206ENST00000475663 ZNF804BA4D1E1 1349 aa16.57■□□□□ 0.24
NIPAL3-206ENST00000475663 APLP1P51693 650 aa16.57■□□□□ 0.24
NIPAL3-206ENST00000475663 FMR1Q06787 632 aaKnown RBP eCLIP16.57■□□□□ 0.24
NIPAL3-206ENST00000475663 LDHAL6AQ6ZMR3 332 aa16.57■□□□□ 0.24
NIPAL3-206ENST00000475663 CNNM1Q9NRU3 951 aa16.57■□□□□ 0.24
NIPAL3-206ENST00000475663 KCNJ4P48050 445 aa16.56■□□□□ 0.24
NIPAL3-206ENST00000475663 MICALL2Q8IY33 904 aa16.56■□□□□ 0.24
NIPAL3-206ENST00000475663 TRPM4Q8TD43 1214 aa16.56■□□□□ 0.24
NIPAL3-206ENST00000475663 FBXW7Q969H0 707 aa16.56■□□□□ 0.24
NIPAL3-206ENST00000475663 MXD3Q9BW11 206 aa16.56■□□□□ 0.24
NIPAL3-206ENST00000475663 ANKRD2Q9GZV1 360 aa16.56■□□□□ 0.24
NIPAL3-206ENST00000475663 CNOT7Q9UIV1 285 aaKnown RBP16.56■□□□□ 0.24
NIPAL3-206ENST00000475663 KIF16BQ96L93 1317 aa16.55■□□□□ 0.24
NIPAL3-206ENST00000475663 TRIM27P14373 513 aa16.55■□□□□ 0.24
NIPAL3-206ENST00000475663 RABL6Q3YEC7 729 aaPredicted RBP16.55■□□□□ 0.24
NIPAL3-206ENST00000475663 RBM26Q5T8P6 1007 aaKnown RBP16.55■□□□□ 0.24
NIPAL3-206ENST00000475663 SAMD7Q7Z3H4 446 aa16.55■□□□□ 0.24
NIPAL3-206ENST00000475663 PNMA8AQ86V59 439 aaPredicted RBP16.55■□□□□ 0.24
NIPAL3-206ENST00000475663 MEIS3Q99687 375 aa16.55■□□□□ 0.24
NIPAL3-206ENST00000475663 LEMD3Q9Y2U8 911 aa16.55■□□□□ 0.24
NIPAL3-206ENST00000475663 MED23Q9ULK4 1368 aa16.54■□□□□ 0.24
NIPAL3-206ENST00000475663 EGFRP00533 1210 aa16.54■□□□□ 0.24
NIPAL3-206ENST00000475663 UBTFL1P0CB47 393 aaPredicted RBP16.54■□□□□ 0.24
NIPAL3-206ENST00000475663 HIRAP54198 1017 aaPredicted RBP16.54■□□□□ 0.24
NIPAL3-206ENST00000475663 TBC1D10BQ4KMP7 808 aaPredicted RBP16.54■□□□□ 0.24
NIPAL3-206ENST00000475663 LRRC24Q50LG9 513 aa16.54■□□□□ 0.24
NIPAL3-206ENST00000475663 CNTROBQ8N137 903 aa16.54■□□□□ 0.24
NIPAL3-206ENST00000475663 ADARB2Q9NS39 739 aaKnown RBP16.54■□□□□ 0.24
NIPAL3-206ENST00000475663 SCN4AP35499 1836 aa16.54■□□□□ 0.24
NIPAL3-206ENST00000475663 ITGBL1O95965 494 aaPredicted RBP16.53■□□□□ 0.24
NIPAL3-206ENST00000475663 LRRFIP2Q9Y608 721 aaKnown RBP16.53■□□□□ 0.24
NIPAL3-206ENST00000475663 CEP350Q5VT06 3117 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms