RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 LAMB2P55268 1798 aa18.37■□□□□ 0.53
FAM3A-218ENST00000475657 NEFMP07197 916 aa18.36■□□□□ 0.53
FAM3A-218ENST00000475657 SCARF1Q14162 830 aa18.36■□□□□ 0.53
FAM3A-218ENST00000475657 ANGEL2Q5VTE6 544 aaKnown RBP18.36■□□□□ 0.53
FAM3A-218ENST00000475657 AGBL3Q8NEM8 1001 aa18.36■□□□□ 0.53
FAM3A-218ENST00000475657 PAPPA2Q9BXP8 1791 aa18.36■□□□□ 0.53
FAM3A-218ENST00000475657 PPP2R1AP30153 589 aa18.35■□□□□ 0.53
FAM3A-218ENST00000475657 GPSM2P81274 684 aa18.35■□□□□ 0.53
FAM3A-218ENST00000475657 DOK7Q18PE1 504 aa18.35■□□□□ 0.53
FAM3A-218ENST00000475657 INTS3Q68E01 1043 aaKnown RBP18.35■□□□□ 0.53
FAM3A-218ENST00000475657 TBC1D16Q8TBP0 767 aa18.35■□□□□ 0.53
FAM3A-218ENST00000475657 ZC3H12CQ9C0D7 883 aaKnown RBP18.35■□□□□ 0.53
FAM3A-218ENST00000475657 FKTNO75072 461 aa18.34■□□□□ 0.53
FAM3A-218ENST00000475657 PROSER3Q2NL68 480 aa18.34■□□□□ 0.53
FAM3A-218ENST00000475657 COPS6Q7L5N1 327 aa18.34■□□□□ 0.53
FAM3A-218ENST00000475657 CELF1Q92879 486 aaKnown RBP18.34■□□□□ 0.53
FAM3A-218ENST00000475657 MKI67P46013 3256 aaKnown RBP18.34■□□□□ 0.53
FAM3A-218ENST00000475657 EIF2S2P20042 333 aaKnown RBP18.33■□□□□ 0.52
FAM3A-218ENST00000475657 PODXL2Q9NZ53 605 aa18.33■□□□□ 0.52
FAM3A-218ENST00000475657 UBE2Q2LH0YL09 131 aa18.32■□□□□ 0.52
FAM3A-218ENST00000475657 SREBF2Q12772 1141 aa18.32■□□□□ 0.52
FAM3A-218ENST00000475657 NFE2L2Q16236 605 aa18.32■□□□□ 0.52
FAM3A-218ENST00000475657 RSBN1LQ6PCB5 846 aaPredicted RBP18.32■□□□□ 0.52
FAM3A-218ENST00000475657 TAF1P21675 1872 aa18.31■□□□□ 0.52
FAM3A-218ENST00000475657 ANXA1P04083 346 aa18.31■□□□□ 0.52
FAM3A-218ENST00000475657 FXR1P51114 621 aaKnown RBP eCLIP18.31■□□□□ 0.52
FAM3A-218ENST00000475657 XAGE3Q8WTP9 111 aa18.31■□□□□ 0.52
FAM3A-218ENST00000475657 GMLQ99445 158 aa18.31■□□□□ 0.52
FAM3A-218ENST00000475657 BABAM1Q9NWV8 329 aa18.31■□□□□ 0.52
FAM3A-218ENST00000475657 TSPYL4Q9UJ04 414 aa18.31■□□□□ 0.52
FAM3A-218ENST00000475657 DDX60Q8IY21 1712 aaKnown RBP18.31■□□□□ 0.52
FAM3A-218ENST00000475657 USP17L8P0C7I0 530 aa18.3■□□□□ 0.52
FAM3A-218ENST00000475657 RPS8P62241 208 aaKnown RBP18.3■□□□□ 0.52
FAM3A-218ENST00000475657 MOB2Q70IA6 237 aa18.3■□□□□ 0.52
FAM3A-218ENST00000475657 PLEKHF1Q96S99 279 aa18.3■□□□□ 0.52
FAM3A-218ENST00000475657 MYOZ2Q9NPC6 264 aa18.3■□□□□ 0.52
FAM3A-218ENST00000475657 KIAA0100Q14667 2235 aaKnown RBP18.3■□□□□ 0.52
FAM3A-218ENST00000475657 ALDH1A1P00352 501 aa18.29■□□□□ 0.52
FAM3A-218ENST00000475657 AIMP1Q12904 312 aaKnown RBP18.29■□□□□ 0.52
FAM3A-218ENST00000475657 SCN9AQ15858 1988 aa18.29■□□□□ 0.52
FAM3A-218ENST00000475657 G3V3G9 751 aa18.28■□□□□ 0.52
FAM3A-218ENST00000475657 DCAF8Q5TAQ9 597 aa18.28■□□□□ 0.52
FAM3A-218ENST00000475657 HTTP42858 3142 aa18.27■□□□□ 0.52
FAM3A-218ENST00000475657 DLG5Q8TDM6 1919 aa18.27■□□□□ 0.52
FAM3A-218ENST00000475657 FAM89AQ96GI7 184 aa18.27■□□□□ 0.52
FAM3A-218ENST00000475657 ISCA1Q9BUE6 129 aa18.27■□□□□ 0.52
FAM3A-218ENST00000475657 R3HDMLQ9H3Y0 253 aa18.27■□□□□ 0.52
FAM3A-218ENST00000475657 POTEFA5A3E0 1075 aa18.26■□□□□ 0.51
FAM3A-218ENST00000475657 NF2P35240 595 aa18.26■□□□□ 0.51
FAM3A-218ENST00000475657 PNNQ9H307 717 aaKnown RBP18.26■□□□□ 0.51
FAM3A-218ENST00000475657 UFL1O94874 794 aa18.25■□□□□ 0.51
FAM3A-218ENST00000475657 INHBEP58166 350 aa18.25■□□□□ 0.51
FAM3A-218ENST00000475657 TRIM28Q13263 835 aaKnown RBP18.25■□□□□ 0.51
FAM3A-218ENST00000475657 TTLL12Q14166 644 aaPredicted RBP18.25■□□□□ 0.51
FAM3A-218ENST00000475657 PODNQ7Z5L7 613 aa18.25■□□□□ 0.51
FAM3A-218ENST00000475657 PLBD2Q8NHP8 589 aa18.25■□□□□ 0.51
FAM3A-218ENST00000475657 GGA1Q9UJY5 639 aa18.25■□□□□ 0.51
FAM3A-218ENST00000475657 USP17L3A6NCW0 530 aa18.24■□□□□ 0.51
FAM3A-218ENST00000475657 USP17L4A6NCW7 530 aa18.24■□□□□ 0.51
FAM3A-218ENST00000475657 OTOP1Q7RTM1 612 aa18.24■□□□□ 0.51
FAM3A-218ENST00000475657 USP17L1Q7RTZ2 530 aa18.24■□□□□ 0.51
FAM3A-218ENST00000475657 ANKIB1Q9P2G1 1089 aa18.24■□□□□ 0.51
FAM3A-218ENST00000475657 TRIM17Q9Y577 477 aa18.24■□□□□ 0.51
FAM3A-218ENST00000475657 ZNF316A6NFI3 1004 aaPredicted RBP18.23■□□□□ 0.51
FAM3A-218ENST00000475657 MMP14P50281 582 aa18.23■□□□□ 0.51
FAM3A-218ENST00000475657 PTPN12Q05209 780 aaKnown RBP18.23■□□□□ 0.51
FAM3A-218ENST00000475657 LDLRAD1Q5T700 205 aa18.23■□□□□ 0.51
FAM3A-218ENST00000475657 PRAMEF18Q5VWM3 479 aa18.23■□□□□ 0.51
FAM3A-218ENST00000475657 SPRYD7Q5W111 196 aa18.23■□□□□ 0.51
FAM3A-218ENST00000475657 ANKRD13DQ6ZTN6 518 aa18.23■□□□□ 0.51
FAM3A-218ENST00000475657 ARMC9Q7Z3E5 817 aa18.23■□□□□ 0.51
FAM3A-218ENST00000475657 ARMC5Q96C12 935 aa18.23■□□□□ 0.51
FAM3A-218ENST00000475657 CEP290O15078 2479 aa18.22■□□□□ 0.51
FAM3A-218ENST00000475657 IRS4O14654 1257 aaPredicted RBP18.22■□□□□ 0.51
FAM3A-218ENST00000475657 HSP90B1P14625 803 aaKnown RBP18.22■□□□□ 0.51
FAM3A-218ENST00000475657 MKRN3Q13064 507 aaKnown RBP18.22■□□□□ 0.51
FAM3A-218ENST00000475657 NBPF9Q3BBW0 867 aa18.22■□□□□ 0.51
FAM3A-218ENST00000475657 COL4A1P02462 1669 aa18.22■□□□□ 0.51
FAM3A-218ENST00000475657 MANSC4A6NHS7 340 aaPredicted RBP18.21■□□□□ 0.51
FAM3A-218ENST00000475657 SCAF8Q9UPN6 1271 aaKnown RBP18.21■□□□□ 0.51
FAM3A-218ENST00000475657 PTPN22Q9Y2R2 807 aa18.21■□□□□ 0.51
FAM3A-218ENST00000475657 MAPK8IP3Q9UPT6 1336 aa18.21■□□□□ 0.51
FAM3A-218ENST00000475657 TRIOBPQ9H2D6 2365 aa18.2■□□□□ 0.5
FAM3A-218ENST00000475657 WNT10BO00744 389 aa18.2■□□□□ 0.5
FAM3A-218ENST00000475657 IFNL1Q8IU54 200 aa18.2■□□□□ 0.5
FAM3A-218ENST00000475657 OGFOD1Q8N543 542 aa18.2■□□□□ 0.5
FAM3A-218ENST00000475657 ERO1AQ96HE7 468 aa18.2■□□□□ 0.5
FAM3A-218ENST00000475657 PSME4Q14997 1843 aa18.2■□□□□ 0.5
FAM3A-218ENST00000475657 RBBP6Q7Z6E9 1792 aaKnown RBP18.19■□□□□ 0.5
FAM3A-218ENST00000475657 CENPFP49454 3210 aa18.19■□□□□ 0.5
FAM3A-218ENST00000475657 ATP5J2-PTCD1G3V325 749 aa18.19■□□□□ 0.5
FAM3A-218ENST00000475657 ZNF428Q96B54 188 aa18.19■□□□□ 0.5
FAM3A-218ENST00000475657 COLQQ9Y215 455 aaPredicted RBP18.19■□□□□ 0.5
FAM3A-218ENST00000475657 XDHP47989 1333 aa18.19■□□□□ 0.5
FAM3A-218ENST00000475657 ZBTB48P10074 688 aaPredicted RBP18.18■□□□□ 0.5
FAM3A-218ENST00000475657 EN2P19622 333 aaPredicted RBP18.18■□□□□ 0.5
FAM3A-218ENST00000475657 ATP2B4P23634 1241 aa18.18■□□□□ 0.5
FAM3A-218ENST00000475657 ZBTB38Q8NAP3 1195 aaPredicted RBP18.18■□□□□ 0.5
FAM3A-218ENST00000475657 SEC31BQ9NQW1 1179 aa18.18■□□□□ 0.5
FAM3A-218ENST00000475657 CHPF2Q9P2E5 772 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms