RNA–Protein interactions for RNA: ENST00000475464.1

PTP4A2-204, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-204ENST00000475464 TBC1D16Q8TBP0 767 aa13.25□□□□□ -0.29
PTP4A2-204ENST00000475464 ANKIB1Q9P2G1 1089 aa13.25□□□□□ -0.29
PTP4A2-204ENST00000475464 THSD7BQ9C0I4 1608 aa13.24□□□□□ -0.29
PTP4A2-204ENST00000475464 HOXB7P09629 217 aa13.24□□□□□ -0.29
PTP4A2-204ENST00000475464 HSP90B1P14625 803 aaKnown RBP13.24□□□□□ -0.29
PTP4A2-204ENST00000475464 KIF4BQ2VIQ3 1234 aa13.24□□□□□ -0.29
PTP4A2-204ENST00000475464 RIC3Q7Z5B4 369 aa13.24□□□□□ -0.29
PTP4A2-204ENST00000475464 RUNDC1Q96C34 613 aa13.24□□□□□ -0.29
PTP4A2-204ENST00000475464 TRIM35Q9UPQ4 493 aa13.24□□□□□ -0.29
PTP4A2-204ENST00000475464 FAM155AB1AL88 458 aaPredicted RBP13.23□□□□□ -0.29
PTP4A2-204ENST00000475464 TRPA1O75762 1119 aa13.23□□□□□ -0.29
PTP4A2-204ENST00000475464 UFL1O94874 794 aa13.23□□□□□ -0.29
PTP4A2-204ENST00000475464 VIL1P09327 827 aaKnown RBP13.23□□□□□ -0.29
PTP4A2-204ENST00000475464 GOLGA2Q08379 1002 aa13.23□□□□□ -0.29
PTP4A2-204ENST00000475464 TRIM28Q13263 835 aaKnown RBP13.23□□□□□ -0.29
PTP4A2-204ENST00000475464 DUSP27Q5VZP5 1158 aa13.23□□□□□ -0.29
PTP4A2-204ENST00000475464 GGA3Q9NZ52 723 aa13.23□□□□□ -0.29
PTP4A2-204ENST00000475464 GGA1Q9UJY5 639 aa13.23□□□□□ -0.29
PTP4A2-204ENST00000475464 RTL9Q8NET4 1388 aa13.22□□□□□ -0.29
PTP4A2-204ENST00000475464 ZBTB38Q8NAP3 1195 aaPredicted RBP13.22□□□□□ -0.29
PTP4A2-204ENST00000475464 SEC31BQ9NQW1 1179 aa13.22□□□□□ -0.29
PTP4A2-204ENST00000475464 RNF186Q9NXI6 227 aa13.22□□□□□ -0.29
PTP4A2-204ENST00000475464 SAGE1Q9NXZ1 904 aa13.22□□□□□ -0.29
PTP4A2-204ENST00000475464 SCARF1Q14162 830 aa13.21□□□□□ -0.29
PTP4A2-204ENST00000475464 CCDC152Q4G0S7 254 aa13.21□□□□□ -0.29
PTP4A2-204ENST00000475464 CDCA5Q96FF9 252 aa13.21□□□□□ -0.29
PTP4A2-204ENST00000475464 CCDC85AQ96PX6 553 aaPredicted RBP13.21□□□□□ -0.29
PTP4A2-204ENST00000475464 PODXL2Q9NZ53 605 aa13.21□□□□□ -0.29
PTP4A2-204ENST00000475464 DUOX1Q9NRD9 1551 aa13.2□□□□□ -0.3
PTP4A2-204ENST00000475464 ASTN2O75129 1339 aaPredicted RBP13.2□□□□□ -0.3
PTP4A2-204ENST00000475464 MYBBP1AQ9BQG0 1328 aaKnown RBP13.2□□□□□ -0.3
PTP4A2-204ENST00000475464 CASP8AP2Q9UKL3 1982 aa13.2□□□□□ -0.3
PTP4A2-204ENST00000475464 ELL2O00472 640 aaPredicted RBP13.2□□□□□ -0.3
PTP4A2-204ENST00000475464 SLC10A3P09131 477 aa13.2□□□□□ -0.3
PTP4A2-204ENST00000475464 ANGEL2Q5VTE6 544 aaKnown RBP13.2□□□□□ -0.3
PTP4A2-204ENST00000475464 RSBN1LQ6PCB5 846 aaPredicted RBP13.2□□□□□ -0.3
PTP4A2-204ENST00000475464 CSRNP1Q96S65 589 aa13.2□□□□□ -0.3
PTP4A2-204ENST00000475464 MYD88Q99836 296 aa13.2□□□□□ -0.3
PTP4A2-204ENST00000475464 ADAMTS8Q9UP79 889 aa13.2□□□□□ -0.3
PTP4A2-204ENST00000475464 AGBL3Q8NEM8 1001 aa13.19□□□□□ -0.3
PTP4A2-204ENST00000475464 JARID2Q92833 1246 aaPredicted RBP13.19□□□□□ -0.3
PTP4A2-204ENST00000475464 PHAXQ9H814 394 aaKnown RBP13.19□□□□□ -0.3
PTP4A2-204ENST00000475464 MBIPQ9NS73 344 aa13.19□□□□□ -0.3
PTP4A2-204ENST00000475464 ANKRD36CQ5JPF3 1778 aa13.19□□□□□ -0.3
PTP4A2-204ENST00000475464 PDE8AO60658 829 aa13.18□□□□□ -0.3
PTP4A2-204ENST00000475464 USP17L8P0C7I0 530 aa13.18□□□□□ -0.3
PTP4A2-204ENST00000475464 SOX10P56693 466 aa13.18□□□□□ -0.3
PTP4A2-204ENST00000475464 ZNF280AP59817 542 aaPredicted RBP13.18□□□□□ -0.3
PTP4A2-204ENST00000475464 DDX10Q13206 875 aaKnown RBP13.18□□□□□ -0.3
PTP4A2-204ENST00000475464 ANKRD18AQ8IVF6 992 aa13.18□□□□□ -0.3
PTP4A2-204ENST00000475464 REM2Q8IYK8 340 aaPredicted RBP13.18□□□□□ -0.3
PTP4A2-204ENST00000475464 CCDC191Q8NCU4 936 aa13.18□□□□□ -0.3
PTP4A2-204ENST00000475464 MYOZ2Q9NPC6 264 aa13.18□□□□□ -0.3
PTP4A2-204ENST00000475464 CWC25Q9NXE8 425 aaPredicted RBP13.18□□□□□ -0.3
PTP4A2-204ENST00000475464 LAMB2P55268 1798 aa13.17□□□□□ -0.3
PTP4A2-204ENST00000475464 TAF1P21675 1872 aa13.17□□□□□ -0.3
PTP4A2-204ENST00000475464 USP17L3A6NCW0 530 aa13.17□□□□□ -0.3
PTP4A2-204ENST00000475464 USP17L4A6NCW7 530 aa13.17□□□□□ -0.3
PTP4A2-204ENST00000475464 PCCAP05165 728 aaPredicted RBP13.17□□□□□ -0.3
PTP4A2-204ENST00000475464 USP17L1Q7RTZ2 530 aa13.17□□□□□ -0.3
PTP4A2-204ENST00000475464 XDHP47989 1333 aa13.16□□□□□ -0.3
PTP4A2-204ENST00000475464 DDX58O95786 925 aaKnown RBP13.16□□□□□ -0.3
PTP4A2-204ENST00000475464 ATP2B4P23634 1241 aa13.16□□□□□ -0.3
PTP4A2-204ENST00000475464 FKBP1BP68106 108 aa13.16□□□□□ -0.3
PTP4A2-204ENST00000475464 TTLL12Q14166 644 aaPredicted RBP13.16□□□□□ -0.3
PTP4A2-204ENST00000475464 PODNQ7Z5L7 613 aa13.16□□□□□ -0.3
PTP4A2-204ENST00000475464 CTU1Q7Z7A3 348 aaKnown RBP13.16□□□□□ -0.3
PTP4A2-204ENST00000475464 RASAL3Q86YV0 1011 aa13.16□□□□□ -0.3
PTP4A2-204ENST00000475464 FBXW7Q969H0 707 aa13.16□□□□□ -0.3
PTP4A2-204ENST00000475464 SCAF8Q9UPN6 1271 aaKnown RBP13.16□□□□□ -0.3
PTP4A2-204ENST00000475464 UBE2Q2LH0YL09 131 aa13.15□□□□□ -0.3
PTP4A2-204ENST00000475464 GNAI1P63096 354 aa13.15□□□□□ -0.3
PTP4A2-204ENST00000475464 CALD1Q05682 793 aaKnown RBP13.15□□□□□ -0.3
PTP4A2-204ENST00000475464 MOB2Q70IA6 237 aa13.15□□□□□ -0.3
PTP4A2-204ENST00000475464 OGFOD1Q8N543 542 aa13.15□□□□□ -0.3
PTP4A2-204ENST00000475464 CDC5LQ99459 802 aaKnown RBP13.15□□□□□ -0.3
PTP4A2-204ENST00000475464 METTL22Q9BUU2 404 aaPredicted RBP13.15□□□□□ -0.3
PTP4A2-204ENST00000475464 IFT57Q9NWB7 429 aa13.15□□□□□ -0.3
PTP4A2-204ENST00000475464 HDAC9Q9UKV0 1011 aa13.15□□□□□ -0.3
PTP4A2-204ENST00000475464 LRRC37AA6NMS7 1700 aa13.14□□□□□ -0.31
PTP4A2-204ENST00000475464 ZNF853P0CG23 659 aa13.14□□□□□ -0.31
PTP4A2-204ENST00000475464 PRAMEF18Q5VWM3 479 aa13.14□□□□□ -0.31
PTP4A2-204ENST00000475464 GMLQ99445 158 aa13.14□□□□□ -0.31
PTP4A2-204ENST00000475464 CHMP4AQ9BY43 222 aa13.14□□□□□ -0.31
PTP4A2-204ENST00000475464 PITPNM2Q9BZ72 1349 aa13.13□□□□□ -0.31
PTP4A2-204ENST00000475464 COL4A1P02462 1669 aa13.13□□□□□ -0.31
PTP4A2-204ENST00000475464 APAF1O14727 1248 aa13.13□□□□□ -0.31
PTP4A2-204ENST00000475464 TBC1D8O95759 1140 aa13.13□□□□□ -0.31
PTP4A2-204ENST00000475464 NF2P35240 595 aa13.13□□□□□ -0.31
PTP4A2-204ENST00000475464 NBPF9Q3BBW0 867 aa13.13□□□□□ -0.31
PTP4A2-204ENST00000475464 CCDC30Q5VVM6 783 aa13.13□□□□□ -0.31
PTP4A2-204ENST00000475464 MAP3K2Q9Y2U5 619 aa13.13□□□□□ -0.31
PTP4A2-204ENST00000475464 DDX60Q8IY21 1712 aaKnown RBP13.13□□□□□ -0.31
PTP4A2-204ENST00000475464 WTIPA6NIX2 430 aaPredicted RBP13.12□□□□□ -0.31
PTP4A2-204ENST00000475464 CTSWP56202 376 aa13.12□□□□□ -0.31
PTP4A2-204ENST00000475464 MKRN3Q13064 507 aaKnown RBP13.12□□□□□ -0.31
PTP4A2-204ENST00000475464 C8orf58Q8NAV2 365 aa13.12□□□□□ -0.31
PTP4A2-204ENST00000475464 MXD3Q9BW11 206 aa13.12□□□□□ -0.31
PTP4A2-204ENST00000475464 BSDC1Q9NW68 430 aaPredicted RBP13.12□□□□□ -0.31
PTP4A2-204ENST00000475464 MINPP1Q9UNW1 487 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms