RNA–Protein interactions for RNA: ENST00000475163.5

TSPAN1-206, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-206ENST00000475163 CC2D2BQ6DHV5 1058 aa12.69□□□□□ -0.38
TSPAN1-206ENST00000475163 KLHDC4Q8TBB5 520 aa12.69□□□□□ -0.38
TSPAN1-206ENST00000475163 SSH3Q8TE77 659 aa12.69□□□□□ -0.38
TSPAN1-206ENST00000475163 COPRSQ9NQ92 184 aa12.69□□□□□ -0.38
TSPAN1-206ENST00000475163 BSDC1Q9NW68 430 aaPredicted RBP12.69□□□□□ -0.38
TSPAN1-206ENST00000475163 COL4A1P02462 1669 aa12.68□□□□□ -0.38
TSPAN1-206ENST00000475163 C7orf43Q8WVR3 580 aa12.68□□□□□ -0.38
TSPAN1-206ENST00000475163 FBXO3Q9UK99 471 aa12.68□□□□□ -0.38
TSPAN1-206ENST00000475163 PA2G4Q9UQ80 394 aaKnown RBP12.68□□□□□ -0.38
TSPAN1-206ENST00000475163 PCDHB15Q9Y5E8 787 aa12.68□□□□□ -0.38
TSPAN1-206ENST00000475163 EYA2O00167 538 aa12.67□□□□□ -0.38
TSPAN1-206ENST00000475163 G3BP1Q13283 466 aaKnown RBP eCLIP12.67□□□□□ -0.38
TSPAN1-206ENST00000475163 GRIPAP1Q4V328 841 aa12.67□□□□□ -0.38
TSPAN1-206ENST00000475163 CCDC93Q567U6 631 aa12.67□□□□□ -0.38
TSPAN1-206ENST00000475163 SIRT2Q8IXJ6 389 aa12.67□□□□□ -0.38
TSPAN1-206ENST00000475163 PUS3Q9BZE2 481 aaKnown RBP12.67□□□□□ -0.38
TSPAN1-206ENST00000475163 SIL1Q9H173 461 aa12.67□□□□□ -0.38
TSPAN1-206ENST00000475163 MINPP1Q9UNW1 487 aa12.67□□□□□ -0.38
TSPAN1-206ENST00000475163 SPEF2Q9C093 1822 aa12.67□□□□□ -0.38
TSPAN1-206ENST00000475163 SURF6O75683 361 aaKnown RBP12.66□□□□□ -0.38
TSPAN1-206ENST00000475163 CIAO1O76071 339 aa12.66□□□□□ -0.38
TSPAN1-206ENST00000475163 LRRC24Q50LG9 513 aa12.66□□□□□ -0.38
TSPAN1-206ENST00000475163 OLFM4Q6UX06 510 aa12.66□□□□□ -0.38
TSPAN1-206ENST00000475163 RTKN2Q8IZC4 609 aa12.66□□□□□ -0.38
TSPAN1-206ENST00000475163 MPNDQ8N594 471 aa12.66□□□□□ -0.38
TSPAN1-206ENST00000475163 ANKRD2Q9GZV1 360 aa12.66□□□□□ -0.38
TSPAN1-206ENST00000475163 NSFL1CQ9UNZ2 370 aaKnown RBP12.66□□□□□ -0.38
TSPAN1-206ENST00000475163 ARFGEF1Q9Y6D6 1849 aa12.66□□□□□ -0.38
TSPAN1-206ENST00000475163 MROH5Q6ZUA9 1318 aa12.65□□□□□ -0.38
TSPAN1-206ENST00000475163 GRIN3BO60391 1043 aa12.65□□□□□ -0.38
TSPAN1-206ENST00000475163 YBX3P16989 372 aaKnown RBP eCLIP12.65□□□□□ -0.38
TSPAN1-206ENST00000475163 IL15P40933 162 aaPredicted RBP12.65□□□□□ -0.38
TSPAN1-206ENST00000475163 GPSM2P81274 684 aa12.65□□□□□ -0.38
TSPAN1-206ENST00000475163 CHRNDQ07001 517 aa12.65□□□□□ -0.38
TSPAN1-206ENST00000475163 OS9Q13438 667 aaPredicted RBP12.65□□□□□ -0.38
TSPAN1-206ENST00000475163 METTL24Q5JXM2 366 aa12.65□□□□□ -0.38
TSPAN1-206ENST00000475163 DPP8Q6V1X1 898 aaPredicted RBP12.65□□□□□ -0.38
TSPAN1-206ENST00000475163 ANKIB1Q9P2G1 1089 aa12.65□□□□□ -0.38
TSPAN1-206ENST00000475163 NOP58Q9Y2X3 529 aaKnown RBP12.65□□□□□ -0.38
TSPAN1-206ENST00000475163 RIPOR2Q9Y4F9 1068 aa12.65□□□□□ -0.38
TSPAN1-206ENST00000475163 XDHP47989 1333 aa12.64□□□□□ -0.39
TSPAN1-206ENST00000475163 HSP90AB4PQ58FF6 505 aa12.64□□□□□ -0.39
TSPAN1-206ENST00000475163 ARHGAP27Q6ZUM4 889 aa12.64□□□□□ -0.39
TSPAN1-206ENST00000475163 ATG9AQ7Z3C6 839 aa12.64□□□□□ -0.39
TSPAN1-206ENST00000475163 SLC51AQ86UW1 340 aa12.64□□□□□ -0.39
TSPAN1-206ENST00000475163 RWDD1Q9H446 243 aaPredicted RBP12.64□□□□□ -0.39
TSPAN1-206ENST00000475163 PODXL2Q9NZ53 605 aa12.64□□□□□ -0.39
TSPAN1-206ENST00000475163 LRRC37AA6NMS7 1700 aa12.64□□□□□ -0.39
TSPAN1-206ENST00000475163 TAF5LO75529 589 aa12.63□□□□□ -0.39
TSPAN1-206ENST00000475163 ATP2B4P23634 1241 aa12.63□□□□□ -0.39
TSPAN1-206ENST00000475163 KCNJ4P48050 445 aa12.63□□□□□ -0.39
TSPAN1-206ENST00000475163 HDAC1Q13547 482 aaPredicted RBP12.63□□□□□ -0.39
TSPAN1-206ENST00000475163 ZNF784Q8NCA9 323 aaPredicted RBP12.63□□□□□ -0.39
TSPAN1-206ENST00000475163 SUPT20HQ8NEM7 779 aa12.63□□□□□ -0.39
TSPAN1-206ENST00000475163 HELBQ8NG08 1087 aaPredicted RBP12.63□□□□□ -0.39
TSPAN1-206ENST00000475163 CEP126Q9P2H0 1117 aa12.63□□□□□ -0.39
TSPAN1-206ENST00000475163 GGA1Q9UJY5 639 aa12.63□□□□□ -0.39
TSPAN1-206ENST00000475163 EXOC6BQ9Y2D4 811 aa12.63□□□□□ -0.39
TSPAN1-206ENST00000475163 LEMD3Q9Y2U8 911 aa12.63□□□□□ -0.39
TSPAN1-206ENST00000475163 C6orf229H3BNL8 230 aa12.62□□□□□ -0.39
TSPAN1-206ENST00000475163 RAB11FIP3O75154 756 aa12.62□□□□□ -0.39
TSPAN1-206ENST00000475163 PDE8BO95263 885 aa12.62□□□□□ -0.39
TSPAN1-206ENST00000475163 FKBP4Q02790 459 aaKnown RBP eCLIP12.62□□□□□ -0.39
TSPAN1-206ENST00000475163 ERC1Q8IUD2 1116 aa12.62□□□□□ -0.39
TSPAN1-206ENST00000475163 TBC1D16Q8TBP0 767 aa12.62□□□□□ -0.39
TSPAN1-206ENST00000475163 PSMD1Q99460 953 aa12.62□□□□□ -0.39
TSPAN1-206ENST00000475163 TAOK3Q9H2K8 898 aa12.62□□□□□ -0.39
TSPAN1-206ENST00000475163 DCTPP1Q9H773 170 aa12.62□□□□□ -0.39
TSPAN1-206ENST00000475163 SNED1Q8TER0 1413 aa12.62□□□□□ -0.39
TSPAN1-206ENST00000475163 UFL1O94874 794 aa12.61□□□□□ -0.39
TSPAN1-206ENST00000475163 SASH1O94885 1247 aa12.61□□□□□ -0.39
TSPAN1-206ENST00000475163 TFCP2Q12800 502 aa12.61□□□□□ -0.39
TSPAN1-206ENST00000475163 ERICH6BQ5W0A0 696 aa12.61□□□□□ -0.39
TSPAN1-206ENST00000475163 EYA3Q99504 573 aa12.61□□□□□ -0.39
TSPAN1-206ENST00000475163 RTFDC1Q9BY42 306 aaPredicted RBP12.61□□□□□ -0.39
TSPAN1-206ENST00000475163 POLLQ9UGP5 575 aa12.61□□□□□ -0.39
TSPAN1-206ENST00000475163 ZNF804BA4D1E1 1349 aa12.61□□□□□ -0.39
TSPAN1-206ENST00000475163 LTBP3Q9NS15 1303 aa12.61□□□□□ -0.39
TSPAN1-206ENST00000475163 FER1L6Q2WGJ9 1857 aa12.6□□□□□ -0.39
TSPAN1-206ENST00000475163 APBB1O00213 710 aa12.6□□□□□ -0.39
TSPAN1-206ENST00000475163 NFKBIEO00221 500 aa12.6□□□□□ -0.39
TSPAN1-206ENST00000475163 UBE4AQ14139 1066 aa12.6□□□□□ -0.39
TSPAN1-206ENST00000475163 VGLL2Q8N8G2 317 aa12.6□□□□□ -0.39
TSPAN1-206ENST00000475163 GCC1Q96CN9 775 aa12.6□□□□□ -0.39
TSPAN1-206ENST00000475163 KIF1BPQ96EK5 621 aa12.6□□□□□ -0.39
TSPAN1-206ENST00000475163 ZC3H12CQ9C0D7 883 aaKnown RBP12.6□□□□□ -0.39
TSPAN1-206ENST00000475163 AKAP2Q9Y2D5 859 aa12.6□□□□□ -0.39
TSPAN1-206ENST00000475163 A0A1B0GUL6 1792 aa12.59□□□□□ -0.39
TSPAN1-206ENST00000475163 RIMBP2O15034 1052 aa12.59□□□□□ -0.39
TSPAN1-206ENST00000475163 IGHDP01880 384 aa12.59□□□□□ -0.39
TSPAN1-206ENST00000475163 RASSF7Q02833 373 aa12.59□□□□□ -0.39
TSPAN1-206ENST00000475163 PUM3Q15397 648 aaKnown RBP12.59□□□□□ -0.39
TSPAN1-206ENST00000475163 ATP2B3Q16720 1220 aa12.59□□□□□ -0.39
TSPAN1-206ENST00000475163 WASHC4Q2M389 1173 aa12.59□□□□□ -0.39
TSPAN1-206ENST00000475163 RHPN1Q8TCX5 695 aa12.59□□□□□ -0.39
TSPAN1-206ENST00000475163 LPIN2Q92539 896 aa12.59□□□□□ -0.39
TSPAN1-206ENST00000475163 VPS33BQ9H267 617 aa12.59□□□□□ -0.39
TSPAN1-206ENST00000475163 ZNF277Q9NRM2 450 aaPredicted RBP12.59□□□□□ -0.39
TSPAN1-206ENST00000475163 LTBP1Q14766 1721 aa12.59□□□□□ -0.39
TSPAN1-206ENST00000475163 WTIPA6NIX2 430 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms