RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 ADARB2Q9NS39 739 aaKnown RBP15.14■□□□□ 0.01
CLIP2-204ENST00000474962 ZBTB12Q9Y330 459 aaPredicted RBP15.14■□□□□ 0.01
CLIP2-204ENST00000474962 ZNF521Q96K83 1311 aa15.14■□□□□ 0.01
CLIP2-204ENST00000474962 VAMP4O75379 141 aa15.13■□□□□ 0.01
CLIP2-204ENST00000474962 HSP90B1P14625 803 aaKnown RBP15.13■□□□□ 0.01
CLIP2-204ENST00000474962 CCDC152Q4G0S7 254 aa15.13■□□□□ 0.01
CLIP2-204ENST00000474962 CST9Q5W186 159 aa15.13■□□□□ 0.01
CLIP2-204ENST00000474962 SPINK5Q9NQ38 1064 aaPredicted RBP15.13■□□□□ 0.01
CLIP2-204ENST00000474962 CNOT7Q9UIV1 285 aaKnown RBP15.13■□□□□ 0.01
CLIP2-204ENST00000474962 CNTNAP1P78357 1384 aa15.12■□□□□ 0.01
CLIP2-204ENST00000474962 ADAMTSL1Q8N6G6 1762 aa15.12■□□□□ 0.01
CLIP2-204ENST00000474962 WTIPA6NIX2 430 aaPredicted RBP15.12■□□□□ 0.01
CLIP2-204ENST00000474962 PSMD14O00487 310 aa15.12■□□□□ 0.01
CLIP2-204ENST00000474962 DEFB115Q30KQ5 88 aa15.12■□□□□ 0.01
CLIP2-204ENST00000474962 ANKIB1Q9P2G1 1089 aa15.12■□□□□ 0.01
CLIP2-204ENST00000474962 ZBED9Q6R2W3 1325 aa15.12■□□□□ 0.01
CLIP2-204ENST00000474962 FANCIQ9NVI1 1328 aa15.12■□□□□ 0.01
CLIP2-204ENST00000474962 NEURL1BA8MQ27 555 aa15.11■□□□□ 0.01
CLIP2-204ENST00000474962 EXOSC9Q06265 439 aaKnown RBP15.11■□□□□ 0.01
CLIP2-204ENST00000474962 SLFN5Q08AF3 891 aa15.11■□□□□ 0.01
CLIP2-204ENST00000474962 NEXNQ0ZGT2 675 aa15.11■□□□□ 0.01
CLIP2-204ENST00000474962 TTLL11Q8NHH1 800 aa15.11■□□□□ 0.01
CLIP2-204ENST00000474962 ZC3H12CQ9C0D7 883 aaKnown RBP15.11■□□□□ 0.01
CLIP2-204ENST00000474962 ABT1Q9ULW3 272 aaKnown RBP15.11■□□□□ 0.01
CLIP2-204ENST00000474962 DUOX1Q9NRD9 1551 aa15.11■□□□□ 0.01
CLIP2-204ENST00000474962 H7C1W4 665 aa15.1■□□□□ 0.01
CLIP2-204ENST00000474962 ECE2O60344 883 aa15.1■□□□□ 0.01
CLIP2-204ENST00000474962 FLIIQ13045 1269 aa15.1■□□□□ 0.01
CLIP2-204ENST00000474962 TRPM4Q8TD43 1214 aa15.1■□□□□ 0.01
CLIP2-204ENST00000474962 CDCA7LQ96GN5 454 aa15.1■□□□□ 0.01
CLIP2-204ENST00000474962 EYA3Q99504 573 aa15.1■□□□□ 0.01
CLIP2-204ENST00000474962 PODXL2Q9NZ53 605 aa15.1■□□□□ 0.01
CLIP2-204ENST00000474962 PGAP2Q9UHJ9 254 aa15.1■□□□□ 0.01
CLIP2-204ENST00000474962 RASSF10A6NK89 507 aa15.09■□□□□ 0.01
CLIP2-204ENST00000474962 H7C1D1 291 aa15.09■□□□□ 0.01
CLIP2-204ENST00000474962 UFL1O94874 794 aa15.09■□□□□ 0.01
CLIP2-204ENST00000474962 CTSWP56202 376 aa15.09■□□□□ 0.01
CLIP2-204ENST00000474962 DLK2Q6UY11 383 aa15.09■□□□□ 0.01
CLIP2-204ENST00000474962 SAMD7Q7Z3H4 446 aa15.09■□□□□ 0.01
CLIP2-204ENST00000474962 UBE3BQ7Z3V4 1068 aa15.09■□□□□ 0.01
CLIP2-204ENST00000474962 ANKRD18AQ8IVF6 992 aa15.09■□□□□ 0.01
CLIP2-204ENST00000474962 MICALL2Q8IY33 904 aa15.09■□□□□ 0.01
CLIP2-204ENST00000474962 GLIS2Q9BZE0 524 aaPredicted RBP15.09■□□□□ 0.01
CLIP2-204ENST00000474962 GREM2Q9H772 168 aa15.09■□□□□ 0.01
CLIP2-204ENST00000474962 GGA1Q9UJY5 639 aa15.09■□□□□ 0.01
CLIP2-204ENST00000474962 CDHR2Q9BYE9 1310 aa15.09■□□□□ 0.01
CLIP2-204ENST00000474962 EGFRP00533 1210 aa15.08■□□□□ 0
CLIP2-204ENST00000474962 FKBP5Q13451 457 aaPredicted RBP15.08■□□□□ 0
CLIP2-204ENST00000474962 GCKRQ14397 625 aa15.08■□□□□ 0
CLIP2-204ENST00000474962 RBM26Q5T8P6 1007 aaKnown RBP15.08■□□□□ 0
CLIP2-204ENST00000474962 DPF2Q92785 391 aa15.08■□□□□ 0
CLIP2-204ENST00000474962 RTL9Q8NET4 1388 aa15.08■□□□□ 0
CLIP2-204ENST00000474962 G3V3G9 751 aa15.07■□□□□ 0
CLIP2-204ENST00000474962 FOXN1O15353 648 aa15.07■□□□□ 0
CLIP2-204ENST00000474962 TBC1D10BQ4KMP7 808 aaPredicted RBP15.07■□□□□ 0
CLIP2-204ENST00000474962 DCAF8Q5TAQ9 597 aa15.07■□□□□ 0
CLIP2-204ENST00000474962 ZC3H15Q8WU90 426 aaKnown RBP15.07■□□□□ 0
CLIP2-204ENST00000474962 MINPP1Q9UNW1 487 aa15.07■□□□□ 0
CLIP2-204ENST00000474962 WDR33Q9C0J8 1336 aaKnown RBP15.07■□□□□ 0
CLIP2-204ENST00000474962 CELF2O95319 508 aaKnown RBP15.06■□□□□ 0
CLIP2-204ENST00000474962 VIL1P09327 827 aaKnown RBP15.06■□□□□ 0
CLIP2-204ENST00000474962 CASP7P55210 303 aa15.06■□□□□ 0
CLIP2-204ENST00000474962 USP48Q86UV5 1035 aa15.06■□□□□ 0
CLIP2-204ENST00000474962 DNAAF4Q8WXU2 420 aa15.06■□□□□ 0
CLIP2-204ENST00000474962 CDC5LQ99459 802 aaKnown RBP15.06■□□□□ 0
CLIP2-204ENST00000474962 BSDC1Q9NW68 430 aaPredicted RBP15.06■□□□□ 0
CLIP2-204ENST00000474962 LRRC37AA6NMS7 1700 aa15.06■□□□□ 0
CLIP2-204ENST00000474962 F6X3S4 739 aa15.05■□□□□ -0
CLIP2-204ENST00000474962 GRM1Q13255 1194 aa15.05■□□□□ -0
CLIP2-204ENST00000474962 CYP4F22Q6NT55 531 aa15.05■□□□□ -0
CLIP2-204ENST00000474962 CDC37L1Q7L3B6 337 aa15.05■□□□□ -0
CLIP2-204ENST00000474962 TNS4Q8IZW8 715 aa15.05■□□□□ -0
CLIP2-204ENST00000474962 WBP1LQ9NX94 342 aa15.05■□□□□ -0
CLIP2-204ENST00000474962 XDHP47989 1333 aa15.04■□□□□ -0
CLIP2-204ENST00000474962 ATP2B4P23634 1241 aa15.04■□□□□ -0
CLIP2-204ENST00000474962 RPS12P25398 132 aaKnown RBP15.04■□□□□ -0
CLIP2-204ENST00000474962 PAXIP1Q6ZW49 1069 aaPredicted RBP15.04■□□□□ -0
CLIP2-204ENST00000474962 TRMT2AQ8IZ69 625 aaKnown RBP15.04■□□□□ -0
CLIP2-204ENST00000474962 LINS1Q8NG48 757 aa15.04■□□□□ -0
CLIP2-204ENST00000474962 ZNF408Q9H9D4 720 aa15.04■□□□□ -0
CLIP2-204ENST00000474962 TLL2Q9Y6L7 1015 aa15.04■□□□□ -0
CLIP2-204ENST00000474962 CSF1RP07333 972 aa15.03■□□□□ -0
CLIP2-204ENST00000474962 SAPCD2Q86UD0 394 aa15.03■□□□□ -0
CLIP2-204ENST00000474962 CAPNS2Q96L46 248 aa15.03■□□□□ -0
CLIP2-204ENST00000474962 PLA2G12BQ9BX93 195 aa15.03■□□□□ -0
CLIP2-204ENST00000474962 CAPN15O75808 1086 aa15.02■□□□□ -0
CLIP2-204ENST00000474962 CT47B1P0C2W7 299 aaPredicted RBP15.02■□□□□ -0
CLIP2-204ENST00000474962 ITGA6P23229 1130 aa15.02■□□□□ -0
CLIP2-204ENST00000474962 FAM161AQ3B820 660 aa15.02■□□□□ -0
CLIP2-204ENST00000474962 BEND3Q5T5X7 828 aa15.02■□□□□ -0
CLIP2-204ENST00000474962 AIDAQ96BJ3 306 aa15.02■□□□□ -0
CLIP2-204ENST00000474962 ASTN2O75129 1339 aaPredicted RBP15.01□□□□□ -0.01
CLIP2-204ENST00000474962 AOC2O75106 756 aa15.01□□□□□ -0.01
CLIP2-204ENST00000474962 IGHMBP2P38935 993 aaKnown RBP15.01□□□□□ -0.01
CLIP2-204ENST00000474962 CCT4P50991 539 aaKnown RBP15.01□□□□□ -0.01
CLIP2-204ENST00000474962 RSBN1LQ6PCB5 846 aaPredicted RBP15.01□□□□□ -0.01
CLIP2-204ENST00000474962 KRT26Q7Z3Y9 468 aa15.01□□□□□ -0.01
CLIP2-204ENST00000474962 PODNQ7Z5L7 613 aa15.01□□□□□ -0.01
CLIP2-204ENST00000474962 TXNRD3Q86VQ6 643 aa15.01□□□□□ -0.01
CLIP2-204ENST00000474962 GMLQ99445 158 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms