RNA–Protein interactions for RNA: ENST00000474911.5

RTN1-205, Transcript of reticulon 1, humanhuman

TSL 2

Gene RTN1, Length 1,412 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-205ENST00000474911 VPS33BQ9H267 617 aa16.76■□□□□ 0.27
RTN1-205ENST00000474911 PDE8AO60658 829 aa16.75■□□□□ 0.27
RTN1-205ENST00000474911 HMMRO75330 724 aa16.75■□□□□ 0.27
RTN1-205ENST00000474911 VEGFAP15692 232 aaPredicted RBP16.75■□□□□ 0.27
RTN1-205ENST00000474911 C16orf71Q8IYS4 520 aaPredicted RBP16.75■□□□□ 0.27
RTN1-205ENST00000474911 RTFDC1Q9BY42 306 aaPredicted RBP16.75■□□□□ 0.27
RTN1-205ENST00000474911 SCN4AP35499 1836 aa16.75■□□□□ 0.27
RTN1-205ENST00000474911 FZD9O00144 591 aa16.74■□□□□ 0.27
RTN1-205ENST00000474911 SIRT2Q8IXJ6 389 aa16.74■□□□□ 0.27
RTN1-205ENST00000474911 RBM46Q8TBY0 533 aaKnown RBP16.74■□□□□ 0.27
RTN1-205ENST00000474911 POTECB2RU33 542 aa16.73■□□□□ 0.27
RTN1-205ENST00000474911 H7C1W4 665 aa16.73■□□□□ 0.27
RTN1-205ENST00000474911 ATP8B2P98198 1209 aa16.73■□□□□ 0.27
RTN1-205ENST00000474911 UBE3BQ7Z3V4 1068 aa16.73■□□□□ 0.27
RTN1-205ENST00000474911 SLC51AQ86UW1 340 aa16.73■□□□□ 0.27
RTN1-205ENST00000474911 SUPT20HQ8NEM7 779 aa16.73■□□□□ 0.27
RTN1-205ENST00000474911 CNKSR2Q8WXI2 1034 aa16.73■□□□□ 0.27
RTN1-205ENST00000474911 JDP2Q8WYK2 163 aa16.73■□□□□ 0.27
RTN1-205ENST00000474911 DDNO94850 711 aaPredicted RBP16.72■□□□□ 0.27
RTN1-205ENST00000474911 CCDC152Q4G0S7 254 aa16.72■□□□□ 0.27
RTN1-205ENST00000474911 MPNDQ8N594 471 aa16.72■□□□□ 0.27
RTN1-205ENST00000474911 CELF1Q92879 486 aaKnown RBP16.72■□□□□ 0.27
RTN1-205ENST00000474911 SUCLG2Q96I99 432 aa16.72■□□□□ 0.27
RTN1-205ENST00000474911 COL4A1P02462 1669 aa16.72■□□□□ 0.27
RTN1-205ENST00000474911 COL4A5P29400 1685 aa16.72■□□□□ 0.27
RTN1-205ENST00000474911 CASP7P55210 303 aa16.71■□□□□ 0.27
RTN1-205ENST00000474911 DPP8Q6V1X1 898 aaPredicted RBP16.71■□□□□ 0.27
RTN1-205ENST00000474911 SMC5Q8IY18 1101 aa16.71■□□□□ 0.27
RTN1-205ENST00000474911 GCC1Q96CN9 775 aa16.71■□□□□ 0.27
RTN1-205ENST00000474911 L3MBTL3Q96JM7 780 aaPredicted RBP16.71■□□□□ 0.27
RTN1-205ENST00000474911 LTBP1Q14766 1721 aa16.71■□□□□ 0.27
RTN1-205ENST00000474911 DUOX1Q9NRD9 1551 aa16.71■□□□□ 0.27
RTN1-205ENST00000474911 RPS8P62241 208 aaKnown RBP16.7■□□□□ 0.26
RTN1-205ENST00000474911 FSTL1Q12841 308 aa16.7■□□□□ 0.26
RTN1-205ENST00000474911 MTX1Q13505 466 aa16.7■□□□□ 0.26
RTN1-205ENST00000474911 LARGE2Q8N3Y3 721 aa16.7■□□□□ 0.26
RTN1-205ENST00000474911 ZNF541Q9H0D2 1346 aa16.7■□□□□ 0.26
RTN1-205ENST00000474911 HSPA6P17066 643 aa16.7■□□□□ 0.26
RTN1-205ENST00000474911 HOXD11P31277 338 aaPredicted RBP16.7■□□□□ 0.26
RTN1-205ENST00000474911 CTSWP56202 376 aa16.7■□□□□ 0.26
RTN1-205ENST00000474911 JARID2Q92833 1246 aaPredicted RBP16.7■□□□□ 0.26
RTN1-205ENST00000474911 PLA2G12BQ9BX93 195 aa16.7■□□□□ 0.26
RTN1-205ENST00000474911 PNMA6EA0A0J9YXQ4 647 aa16.69■□□□□ 0.26
RTN1-205ENST00000474911 IQCA1LA6NCM1 817 aa16.69■□□□□ 0.26
RTN1-205ENST00000474911 PPIP5K2O43314 1243 aa16.69■□□□□ 0.26
RTN1-205ENST00000474911 GPC2Q8N158 579 aa16.69■□□□□ 0.26
RTN1-205ENST00000474911 TTLL11Q8NHH1 800 aa16.69■□□□□ 0.26
RTN1-205ENST00000474911 SSH3Q8TE77 659 aa16.69■□□□□ 0.26
RTN1-205ENST00000474911 KAZALD1Q96I82 304 aa16.69■□□□□ 0.26
RTN1-205ENST00000474911 BICC1Q9H694 974 aaKnown RBP16.69■□□□□ 0.26
RTN1-205ENST00000474911 DCTPP1Q9H773 170 aa16.69■□□□□ 0.26
RTN1-205ENST00000474911 SEC31BQ9NQW1 1179 aa16.69■□□□□ 0.26
RTN1-205ENST00000474911 RTL9Q8NET4 1388 aa16.68■□□□□ 0.26
RTN1-205ENST00000474911 SRGAP3O43295 1099 aa16.68■□□□□ 0.26
RTN1-205ENST00000474911 EIF6P56537 245 aaKnown RBP16.68■□□□□ 0.26
RTN1-205ENST00000474911 KIAA2012Q0VF49 1180 aa16.68■□□□□ 0.26
RTN1-205ENST00000474911 POLA2Q14181 598 aa16.68■□□□□ 0.26
RTN1-205ENST00000474911 AOC3Q16853 763 aa16.68■□□□□ 0.26
RTN1-205ENST00000474911 NIM1KQ8IY84 436 aa16.68■□□□□ 0.26
RTN1-205ENST00000474911 SMC1BQ8NDV3 1235 aa16.68■□□□□ 0.26
RTN1-205ENST00000474911 RABL6Q3YEC7 729 aaPredicted RBP16.67■□□□□ 0.26
RTN1-205ENST00000474911 CDC5LQ99459 802 aaKnown RBP16.66■□□□□ 0.26
RTN1-205ENST00000474911 PODXL2Q9NZ53 605 aa16.66■□□□□ 0.26
RTN1-205ENST00000474911 NSFL1CQ9UNZ2 370 aaKnown RBP16.66■□□□□ 0.26
RTN1-205ENST00000474911 SPEF2Q9C093 1822 aa16.66■□□□□ 0.26
RTN1-205ENST00000474911 GPSM2P81274 684 aa16.65■□□□□ 0.26
RTN1-205ENST00000474911 EPHA10Q5JZY3 1008 aa16.65■□□□□ 0.26
RTN1-205ENST00000474911 ANKRD18AQ8IVF6 992 aa16.65■□□□□ 0.26
RTN1-205ENST00000474911 ZNRF3Q9ULT6 936 aa16.65■□□□□ 0.26
RTN1-205ENST00000474911 CSF1RP07333 972 aa16.64■□□□□ 0.25
RTN1-205ENST00000474911 FOXO4P98177 505 aa16.64■□□□□ 0.25
RTN1-205ENST00000474911 NUCB1Q02818 461 aa16.64■□□□□ 0.25
RTN1-205ENST00000474911 CCDC85AQ96PX6 553 aaPredicted RBP16.64■□□□□ 0.25
RTN1-205ENST00000474911 TAF1DQ9H5J8 278 aaPredicted RBP16.64■□□□□ 0.25
RTN1-205ENST00000474911 GREM2Q9H772 168 aa16.64■□□□□ 0.25
RTN1-205ENST00000474911 HACL1Q9UJ83 578 aa16.64■□□□□ 0.25
RTN1-205ENST00000474911 APLP1P51693 650 aa16.63■□□□□ 0.25
RTN1-205ENST00000474911 WASHC4Q2M389 1173 aa16.63■□□□□ 0.25
RTN1-205ENST00000474911 HSP90AB4PQ58FF6 505 aa16.63■□□□□ 0.25
RTN1-205ENST00000474911 TBC1D16Q8TBP0 767 aa16.63■□□□□ 0.25
RTN1-205ENST00000474911 EYA3Q99504 573 aa16.63■□□□□ 0.25
RTN1-205ENST00000474911 BSDC1Q9NW68 430 aaPredicted RBP16.63■□□□□ 0.25
RTN1-205ENST00000474911 POLLQ9UGP5 575 aa16.63■□□□□ 0.25
RTN1-205ENST00000474911 ADAMTSL1Q8N6G6 1762 aa16.63■□□□□ 0.25
RTN1-205ENST00000474911 ANKRD45Q5TZF3 282 aa16.62■□□□□ 0.25
RTN1-205ENST00000474911 LMBR1LQ6UX01 489 aa16.62■□□□□ 0.25
RTN1-205ENST00000474911 ZBTB47Q9UFB7 747 aaPredicted RBP16.62■□□□□ 0.25
RTN1-205ENST00000474911 C6orf229H3BNL8 230 aa16.62■□□□□ 0.25
RTN1-205ENST00000474911 CXCL9Q07325 125 aa16.62■□□□□ 0.25
RTN1-205ENST00000474911 PNMA8AQ86V59 439 aaPredicted RBP16.62■□□□□ 0.25
RTN1-205ENST00000474911 CHD1LQ86WJ1 897 aa16.62■□□□□ 0.25
RTN1-205ENST00000474911 ANKIB1Q9P2G1 1089 aa16.62■□□□□ 0.25
RTN1-205ENST00000474911 EXOC6BQ9Y2D4 811 aa16.62■□□□□ 0.25
RTN1-205ENST00000474911 NOP58Q9Y2X3 529 aaKnown RBP16.62■□□□□ 0.25
RTN1-205ENST00000474911 GJA3Q9Y6H8 435 aa16.62■□□□□ 0.25
RTN1-205ENST00000474911 XDHP47989 1333 aa16.61■□□□□ 0.25
RTN1-205ENST00000474911 RAB11FIP3O75154 756 aa16.61■□□□□ 0.25
RTN1-205ENST00000474911 SURF6O75683 361 aaKnown RBP16.61■□□□□ 0.25
RTN1-205ENST00000474911 EPHX2P34913 555 aa16.61■□□□□ 0.25
RTN1-205ENST00000474911 SCNN1DP51172 638 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms