RNA–Protein interactions for RNA: ENST00000474691.1

EPCAM-205, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 714 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-205ENST00000474691 CHMP4AQ9BY43 222 aa17.88■□□□□ 0.45
EPCAM-205ENST00000474691 GBA2Q9HCG7 927 aaPredicted RBP17.88■□□□□ 0.45
EPCAM-205ENST00000474691 ANKRD36CQ5JPF3 1778 aa17.87■□□□□ 0.45
EPCAM-205ENST00000474691 SHTN1A0MZ66 631 aa17.87■□□□□ 0.45
EPCAM-205ENST00000474691 CALD1Q05682 793 aaKnown RBP17.87■□□□□ 0.45
EPCAM-205ENST00000474691 RGMBQ6NW40 437 aa17.87■□□□□ 0.45
EPCAM-205ENST00000474691 CCDC102AQ96A19 550 aa17.87■□□□□ 0.45
EPCAM-205ENST00000474691 POLLQ9UGP5 575 aa17.87■□□□□ 0.45
EPCAM-205ENST00000474691 ZNF157P51786 506 aaPredicted RBP17.86■□□□□ 0.45
EPCAM-205ENST00000474691 KIF4BQ2VIQ3 1234 aa17.86■□□□□ 0.45
EPCAM-205ENST00000474691 MCOLN1Q9GZU1 580 aa17.86■□□□□ 0.45
EPCAM-205ENST00000474691 GGA1Q9UJY5 639 aa17.86■□□□□ 0.45
EPCAM-205ENST00000474691 TRIM35Q9UPQ4 493 aa17.86■□□□□ 0.45
EPCAM-205ENST00000474691 UFL1O94874 794 aa17.85■□□□□ 0.45
EPCAM-205ENST00000474691 DDX58O95786 925 aaKnown RBP17.85■□□□□ 0.45
EPCAM-205ENST00000474691 CCDC152Q4G0S7 254 aa17.85■□□□□ 0.45
EPCAM-205ENST00000474691 ZBTB38Q8NAP3 1195 aaPredicted RBP17.85■□□□□ 0.45
EPCAM-205ENST00000474691 TBC1D16Q8TBP0 767 aa17.85■□□□□ 0.45
EPCAM-205ENST00000474691 MYD88Q99836 296 aa17.85■□□□□ 0.45
EPCAM-205ENST00000474691 THSD7BQ9C0I4 1608 aa17.84■□□□□ 0.45
EPCAM-205ENST00000474691 TRIM28Q13263 835 aaKnown RBP17.84■□□□□ 0.45
EPCAM-205ENST00000474691 ADAMTS8Q9UP79 889 aa17.84■□□□□ 0.45
EPCAM-205ENST00000474691 LAMB2P55268 1798 aa17.84■□□□□ 0.45
EPCAM-205ENST00000474691 ADM5C9JUS6 153 aa17.83■□□□□ 0.44
EPCAM-205ENST00000474691 ELL2O00472 640 aaPredicted RBP17.83■□□□□ 0.44
EPCAM-205ENST00000474691 GNAI1P63096 354 aa17.83■□□□□ 0.44
EPCAM-205ENST00000474691 MBIPQ9NS73 344 aa17.83■□□□□ 0.44
EPCAM-205ENST00000474691 PDE8AO60658 829 aa17.82■□□□□ 0.44
EPCAM-205ENST00000474691 ANKRD18AQ8IVF6 992 aa17.82■□□□□ 0.44
EPCAM-205ENST00000474691 GGA3Q9NZ52 723 aa17.82■□□□□ 0.44
EPCAM-205ENST00000474691 KIF23Q02241 960 aaPredicted RBP17.81■□□□□ 0.44
EPCAM-205ENST00000474691 DLK2Q6UY11 383 aa17.81■□□□□ 0.44
EPCAM-205ENST00000474691 CCDC191Q8NCU4 936 aa17.81■□□□□ 0.44
EPCAM-205ENST00000474691 AGBL3Q8NEM8 1001 aa17.81■□□□□ 0.44
EPCAM-205ENST00000474691 CCDC85AQ96PX6 553 aaPredicted RBP17.81■□□□□ 0.44
EPCAM-205ENST00000474691 SEC31BQ9NQW1 1179 aa17.81■□□□□ 0.44
EPCAM-205ENST00000474691 KCNQ5Q9NR82 932 aa17.81■□□□□ 0.44
EPCAM-205ENST00000474691 CWC25Q9NXE8 425 aaPredicted RBP17.81■□□□□ 0.44
EPCAM-205ENST00000474691 PODXL2Q9NZ53 605 aa17.81■□□□□ 0.44
EPCAM-205ENST00000474691 VIL1P09327 827 aaKnown RBP17.8■□□□□ 0.44
EPCAM-205ENST00000474691 CDC5LQ99459 802 aaKnown RBP17.8■□□□□ 0.44
EPCAM-205ENST00000474691 PHAXQ9H814 394 aaKnown RBP17.8■□□□□ 0.44
EPCAM-205ENST00000474691 IFT57Q9NWB7 429 aa17.8■□□□□ 0.44
EPCAM-205ENST00000474691 SAGE1Q9NXZ1 904 aa17.8■□□□□ 0.44
EPCAM-205ENST00000474691 RTL9Q8NET4 1388 aa17.79■□□□□ 0.44
EPCAM-205ENST00000474691 TRPA1O75762 1119 aa17.79■□□□□ 0.44
EPCAM-205ENST00000474691 EGFRP00533 1210 aa17.79■□□□□ 0.44
EPCAM-205ENST00000474691 PCCAP05165 728 aaPredicted RBP17.79■□□□□ 0.44
EPCAM-205ENST00000474691 ATP2B4P23634 1241 aa17.79■□□□□ 0.44
EPCAM-205ENST00000474691 SCARF1Q14162 830 aa17.79■□□□□ 0.44
EPCAM-205ENST00000474691 CCDC30Q5VVM6 783 aa17.79■□□□□ 0.44
EPCAM-205ENST00000474691 RSBN1LQ6PCB5 846 aaPredicted RBP17.79■□□□□ 0.44
EPCAM-205ENST00000474691 FBXW7Q969H0 707 aa17.79■□□□□ 0.44
EPCAM-205ENST00000474691 ZIC5Q96T25 663 aa17.79■□□□□ 0.44
EPCAM-205ENST00000474691 TAF1P21675 1872 aa17.79■□□□□ 0.44
EPCAM-205ENST00000474691 DUOX1Q9NRD9 1551 aa17.79■□□□□ 0.44
EPCAM-205ENST00000474691 XDHP47989 1333 aa17.78■□□□□ 0.44
EPCAM-205ENST00000474691 NEXNQ0ZGT2 675 aa17.78■□□□□ 0.44
EPCAM-205ENST00000474691 ANGEL2Q5VTE6 544 aaKnown RBP17.78■□□□□ 0.44
EPCAM-205ENST00000474691 REM2Q8IYK8 340 aaPredicted RBP17.78■□□□□ 0.44
EPCAM-205ENST00000474691 CDCA5Q96FF9 252 aa17.78■□□□□ 0.44
EPCAM-205ENST00000474691 USP17L3A6NCW0 530 aa17.77■□□□□ 0.44
EPCAM-205ENST00000474691 USP17L4A6NCW7 530 aa17.77■□□□□ 0.44
EPCAM-205ENST00000474691 APAF1O14727 1248 aa17.77■□□□□ 0.44
EPCAM-205ENST00000474691 USP17L8P0C7I0 530 aa17.77■□□□□ 0.44
EPCAM-205ENST00000474691 RGS19P49795 217 aa17.77■□□□□ 0.44
EPCAM-205ENST00000474691 TTLL12Q14166 644 aaPredicted RBP17.77■□□□□ 0.44
EPCAM-205ENST00000474691 USP17L1Q7RTZ2 530 aa17.77■□□□□ 0.44
EPCAM-205ENST00000474691 PODNQ7Z5L7 613 aa17.77■□□□□ 0.44
EPCAM-205ENST00000474691 OGFOD1Q8N543 542 aa17.77■□□□□ 0.44
EPCAM-205ENST00000474691 JARID2Q92833 1246 aaPredicted RBP17.77■□□□□ 0.44
EPCAM-205ENST00000474691 RNF216Q9NWF9 866 aaPredicted RBP17.77■□□□□ 0.44
EPCAM-205ENST00000474691 LRRC37AA6NMS7 1700 aa17.76■□□□□ 0.43
EPCAM-205ENST00000474691 DDX60Q8IY21 1712 aaKnown RBP17.76■□□□□ 0.43
EPCAM-205ENST00000474691 NF2P35240 595 aa17.76■□□□□ 0.43
EPCAM-205ENST00000474691 METTL22Q9BUU2 404 aaPredicted RBP17.76■□□□□ 0.43
EPCAM-205ENST00000474691 STK31Q9BXU1 1019 aa17.76■□□□□ 0.43
EPCAM-205ENST00000474691 MYOZ2Q9NPC6 264 aa17.76■□□□□ 0.43
EPCAM-205ENST00000474691 RNF186Q9NXI6 227 aa17.76■□□□□ 0.43
EPCAM-205ENST00000474691 CASP8AP2Q9UKL3 1982 aa17.75■□□□□ 0.43
EPCAM-205ENST00000474691 FAM155AB1AL88 458 aaPredicted RBP17.75■□□□□ 0.43
EPCAM-205ENST00000474691 SLC10A3P09131 477 aa17.75■□□□□ 0.43
EPCAM-205ENST00000474691 FKBP1BP68106 108 aa17.75■□□□□ 0.43
EPCAM-205ENST00000474691 MAP3K2Q9Y2U5 619 aa17.75■□□□□ 0.43
EPCAM-205ENST00000474691 HDAC9Q9UKV0 1011 aa17.74■□□□□ 0.43
EPCAM-205ENST00000474691 ZNF853P0CG23 659 aa17.73■□□□□ 0.43
EPCAM-205ENST00000474691 ZNF280AP59817 542 aaPredicted RBP17.73■□□□□ 0.43
EPCAM-205ENST00000474691 ASTN2O75129 1339 aaPredicted RBP17.72■□□□□ 0.43
EPCAM-205ENST00000474691 IGHMBP2P38935 993 aaKnown RBP17.72■□□□□ 0.43
EPCAM-205ENST00000474691 CTSWP56202 376 aa17.72■□□□□ 0.43
EPCAM-205ENST00000474691 KSR2Q6VAB6 950 aa17.72■□□□□ 0.43
EPCAM-205ENST00000474691 CSRNP1Q96S65 589 aa17.72■□□□□ 0.43
EPCAM-205ENST00000474691 PITPNM2Q9BZ72 1349 aa17.72■□□□□ 0.43
EPCAM-205ENST00000474691 KCNJ4P48050 445 aa17.71■□□□□ 0.43
EPCAM-205ENST00000474691 CTU1Q7Z7A3 348 aaKnown RBP17.71■□□□□ 0.43
EPCAM-205ENST00000474691 C8orf58Q8NAV2 365 aa17.71■□□□□ 0.43
EPCAM-205ENST00000474691 BSDC1Q9NW68 430 aaPredicted RBP17.71■□□□□ 0.43
EPCAM-205ENST00000474691 MYO3BQ8WXR4 1341 aa17.71■□□□□ 0.42
EPCAM-205ENST00000474691 PI4KAP2A4QPH2 592 aa17.7■□□□□ 0.42
EPCAM-205ENST00000474691 RASAL3Q86YV0 1011 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms