RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 RTL9Q8NET4 1388 aa18.17■□□□□ 0.5
CCDC78-209ENST00000474647 ADM5C9JUS6 153 aa18.17■□□□□ 0.5
CCDC78-209ENST00000474647 DDX10Q13206 875 aaKnown RBP18.17■□□□□ 0.5
CCDC78-209ENST00000474647 NOGQ13253 232 aa18.17■□□□□ 0.5
CCDC78-209ENST00000474647 DCPSQ96C86 337 aaKnown RBP18.17■□□□□ 0.5
CCDC78-209ENST00000474647 ZIC5Q96T25 663 aa18.17■□□□□ 0.5
CCDC78-209ENST00000474647 MCOLN1Q9GZU1 580 aa18.17■□□□□ 0.5
CCDC78-209ENST00000474647 KCNQ5Q9NR82 932 aa18.17■□□□□ 0.5
CCDC78-209ENST00000474647 G3V3G9 751 aa18.16■□□□□ 0.5
CCDC78-209ENST00000474647 RPS12P25398 132 aaKnown RBP18.16■□□□□ 0.5
CCDC78-209ENST00000474647 MLLT1Q03111 559 aaPredicted RBP18.16■□□□□ 0.5
CCDC78-209ENST00000474647 GOLGA2Q08379 1002 aa18.16■□□□□ 0.5
CCDC78-209ENST00000474647 DCAF8Q5TAQ9 597 aa18.16■□□□□ 0.5
CCDC78-209ENST00000474647 RIC3Q7Z5B4 369 aa18.16■□□□□ 0.5
CCDC78-209ENST00000474647 TBC1D16Q8TBP0 767 aa18.16■□□□□ 0.5
CCDC78-209ENST00000474647 MBIPQ9NS73 344 aa18.16■□□□□ 0.5
CCDC78-209ENST00000474647 UFL1O94874 794 aa18.15■□□□□ 0.5
CCDC78-209ENST00000474647 RPS8P62241 208 aaKnown RBP18.15■□□□□ 0.5
CCDC78-209ENST00000474647 DGKZQ13574 1117 aa18.15■□□□□ 0.5
CCDC78-209ENST00000474647 KIF4BQ2VIQ3 1234 aa18.15■□□□□ 0.5
CCDC78-209ENST00000474647 C2orf69Q8N8R5 385 aa18.15■□□□□ 0.5
CCDC78-209ENST00000474647 GBA2Q9HCG7 927 aaPredicted RBP18.15■□□□□ 0.5
CCDC78-209ENST00000474647 ANKIB1Q9P2G1 1089 aa18.15■□□□□ 0.5
CCDC78-209ENST00000474647 ADAMTS8Q9UP79 889 aa18.15■□□□□ 0.5
CCDC78-209ENST00000474647 RGMBQ6NW40 437 aa18.14■□□□□ 0.49
CCDC78-209ENST00000474647 MYD88Q99836 296 aa18.14■□□□□ 0.49
CCDC78-209ENST00000474647 ZC3H12CQ9C0D7 883 aaKnown RBP18.14■□□□□ 0.49
CCDC78-209ENST00000474647 SEC31BQ9NQW1 1179 aa18.14■□□□□ 0.49
CCDC78-209ENST00000474647 GGA3Q9NZ52 723 aa18.14■□□□□ 0.49
CCDC78-209ENST00000474647 PAPPA2Q9BXP8 1791 aa18.14■□□□□ 0.49
CCDC78-209ENST00000474647 ZEB1P37275 1124 aaPredicted RBP18.13■□□□□ 0.49
CCDC78-209ENST00000474647 ZBTB38Q8NAP3 1195 aaPredicted RBP18.13■□□□□ 0.49
CCDC78-209ENST00000474647 CCDC85AQ96PX6 553 aaPredicted RBP18.13■□□□□ 0.49
CCDC78-209ENST00000474647 PHAXQ9H814 394 aaKnown RBP18.13■□□□□ 0.49
CCDC78-209ENST00000474647 ELL2O00472 640 aaPredicted RBP18.12■□□□□ 0.49
CCDC78-209ENST00000474647 ZNF157P51786 506 aaPredicted RBP18.12■□□□□ 0.49
CCDC78-209ENST00000474647 SULF1Q8IWU6 871 aa18.12■□□□□ 0.49
CCDC78-209ENST00000474647 GGA1Q9UJY5 639 aa18.12■□□□□ 0.49
CCDC78-209ENST00000474647 CACNA1FO60840 1977 aa18.11■□□□□ 0.49
CCDC78-209ENST00000474647 FAM155AB1AL88 458 aaPredicted RBP18.11■□□□□ 0.49
CCDC78-209ENST00000474647 TRIM28Q13263 835 aaKnown RBP18.11■□□□□ 0.49
CCDC78-209ENST00000474647 CCDC152Q4G0S7 254 aa18.11■□□□□ 0.49
CCDC78-209ENST00000474647 JARID2Q92833 1246 aaPredicted RBP18.11■□□□□ 0.49
CCDC78-209ENST00000474647 ASTN2O75129 1339 aaPredicted RBP18.11■□□□□ 0.49
CCDC78-209ENST00000474647 ECM29Q5VYK3 1845 aa18.11■□□□□ 0.49
CCDC78-209ENST00000474647 A0A1B0GUL6 1792 aa18.1■□□□□ 0.49
CCDC78-209ENST00000474647 HSP90B1P14625 803 aaKnown RBP18.1■□□□□ 0.49
CCDC78-209ENST00000474647 CCDC102AQ96A19 550 aa18.1■□□□□ 0.49
CCDC78-209ENST00000474647 PODXL2Q9NZ53 605 aa18.1■□□□□ 0.49
CCDC78-209ENST00000474647 VIL1P09327 827 aaKnown RBP18.09■□□□□ 0.49
CCDC78-209ENST00000474647 KIF23Q02241 960 aaPredicted RBP18.09■□□□□ 0.49
CCDC78-209ENST00000474647 CDCA5Q96FF9 252 aa18.09■□□□□ 0.49
CCDC78-209ENST00000474647 PDE8AO60658 829 aa18.08■□□□□ 0.48
CCDC78-209ENST00000474647 PCCAP05165 728 aaPredicted RBP18.08■□□□□ 0.48
CCDC78-209ENST00000474647 RGS19P49795 217 aa18.08■□□□□ 0.48
CCDC78-209ENST00000474647 GNAI1P63096 354 aa18.08■□□□□ 0.48
CCDC78-209ENST00000474647 ANGEL2Q5VTE6 544 aaKnown RBP18.08■□□□□ 0.48
CCDC78-209ENST00000474647 CCDC191Q8NCU4 936 aa18.08■□□□□ 0.48
CCDC78-209ENST00000474647 IFT57Q9NWB7 429 aa18.08■□□□□ 0.48
CCDC78-209ENST00000474647 CWC25Q9NXE8 425 aaPredicted RBP18.08■□□□□ 0.48
CCDC78-209ENST00000474647 PDE4DIPQ5VU43 2346 aa18.07■□□□□ 0.48
CCDC78-209ENST00000474647 ZNF609O15014 1411 aa18.07■□□□□ 0.48
CCDC78-209ENST00000474647 XDHP47989 1333 aa18.07■□□□□ 0.48
CCDC78-209ENST00000474647 APAF1O14727 1248 aa18.07■□□□□ 0.48
CCDC78-209ENST00000474647 TRPA1O75762 1119 aa18.07■□□□□ 0.48
CCDC78-209ENST00000474647 ZNF853P0CG23 659 aa18.07■□□□□ 0.48
CCDC78-209ENST00000474647 RSBN1LQ6PCB5 846 aaPredicted RBP18.07■□□□□ 0.48
CCDC78-209ENST00000474647 ANKRD18AQ8IVF6 992 aa18.07■□□□□ 0.48
CCDC78-209ENST00000474647 SAGE1Q9NXZ1 904 aa18.07■□□□□ 0.48
CCDC78-209ENST00000474647 DDX58O95786 925 aaKnown RBP18.06■□□□□ 0.48
CCDC78-209ENST00000474647 SLC10A3P09131 477 aa18.06■□□□□ 0.48
CCDC78-209ENST00000474647 CALD1Q05682 793 aaKnown RBP18.06■□□□□ 0.48
CCDC78-209ENST00000474647 SCARF1Q14162 830 aa18.06■□□□□ 0.48
CCDC78-209ENST00000474647 AGBL3Q8NEM8 1001 aa18.06■□□□□ 0.48
CCDC78-209ENST00000474647 ZNF280AP59817 542 aaPredicted RBP18.05■□□□□ 0.48
CCDC78-209ENST00000474647 RNF186Q9NXI6 227 aa18.05■□□□□ 0.48
CCDC78-209ENST00000474647 SCAF8Q9UPN6 1271 aaKnown RBP18.05■□□□□ 0.48
CCDC78-209ENST00000474647 USP17L8P0C7I0 530 aa18.04■□□□□ 0.48
CCDC78-209ENST00000474647 C8orf58Q8NAV2 365 aa18.04■□□□□ 0.48
CCDC78-209ENST00000474647 FBXW7Q969H0 707 aa18.04■□□□□ 0.48
CCDC78-209ENST00000474647 METTL22Q9BUU2 404 aaPredicted RBP18.04■□□□□ 0.48
CCDC78-209ENST00000474647 MYOZ2Q9NPC6 264 aa18.04■□□□□ 0.48
CCDC78-209ENST00000474647 MAP3K2Q9Y2U5 619 aa18.04■□□□□ 0.48
CCDC78-209ENST00000474647 SLC34A2O95436 690 aa18.03■□□□□ 0.48
CCDC78-209ENST00000474647 ATP2B4P23634 1241 aa18.03■□□□□ 0.48
CCDC78-209ENST00000474647 CTSWP56202 376 aa18.03■□□□□ 0.48
CCDC78-209ENST00000474647 CCDC30Q5VVM6 783 aa18.03■□□□□ 0.48
CCDC78-209ENST00000474647 RASAL3Q86YV0 1011 aa18.03■□□□□ 0.48
CCDC78-209ENST00000474647 CDC5LQ99459 802 aaKnown RBP18.03■□□□□ 0.48
CCDC78-209ENST00000474647 USP17L3A6NCW0 530 aa18.02■□□□□ 0.48
CCDC78-209ENST00000474647 USP17L4A6NCW7 530 aa18.02■□□□□ 0.48
CCDC78-209ENST00000474647 USP17L1Q7RTZ2 530 aa18.02■□□□□ 0.48
CCDC78-209ENST00000474647 CSRNP1Q96S65 589 aa18.02■□□□□ 0.48
CCDC78-209ENST00000474647 MED23Q9ULK4 1368 aa18.02■□□□□ 0.47
CCDC78-209ENST00000474647 PITPNM2Q9BZ72 1349 aa18.01■□□□□ 0.47
CCDC78-209ENST00000474647 SOX10P56693 466 aa18.01■□□□□ 0.47
CCDC78-209ENST00000474647 PODNQ7Z5L7 613 aa18.01■□□□□ 0.47
CCDC78-209ENST00000474647 PRKRIP1Q9H875 184 aaPredicted RBP18.01■□□□□ 0.47
CCDC78-209ENST00000474647 WTIPA6NIX2 430 aaPredicted RBP18■□□□□ 0.47
CCDC78-209ENST00000474647 TTLL12Q14166 644 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms