RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 MPNDQ8N594 471 aa19.67■□□□□ 0.74
COL1A1-204ENST00000474644 ZBTB40Q9NUA8 1239 aa19.67■□□□□ 0.74
COL1A1-204ENST00000474644 KLHDC4Q8TBB5 520 aa19.66■□□□□ 0.74
COL1A1-204ENST00000474644 CHMP4BQ9H444 224 aaKnown RBP19.66■□□□□ 0.74
COL1A1-204ENST00000474644 MINPP1Q9UNW1 487 aa19.66■□□□□ 0.74
COL1A1-204ENST00000474644 SRGAP3O43295 1099 aa19.65■□□□□ 0.74
COL1A1-204ENST00000474644 LDHAL6AQ6ZMR3 332 aa19.65■□□□□ 0.74
COL1A1-204ENST00000474644 RTFDC1Q9BY42 306 aaPredicted RBP19.65■□□□□ 0.74
COL1A1-204ENST00000474644 PODXL2Q9NZ53 605 aa19.65■□□□□ 0.74
COL1A1-204ENST00000474644 NSFL1CQ9UNZ2 370 aaKnown RBP19.65■□□□□ 0.74
COL1A1-204ENST00000474644 PNMA6EA0A0J9YXQ4 647 aa19.64■□□□□ 0.73
COL1A1-204ENST00000474644 LMNB1P20700 586 aa19.64■□□□□ 0.73
COL1A1-204ENST00000474644 PTPN12Q05209 780 aaKnown RBP19.64■□□□□ 0.73
COL1A1-204ENST00000474644 CEP85Q6P2H3 762 aa19.64■□□□□ 0.73
COL1A1-204ENST00000474644 CRBNQ96SW2 442 aa19.64■□□□□ 0.73
COL1A1-204ENST00000474644 PUS3Q9BZE2 481 aaKnown RBP19.64■□□□□ 0.73
COL1A1-204ENST00000474644 ZNF277Q9NRM2 450 aaPredicted RBP19.64■□□□□ 0.73
COL1A1-204ENST00000474644 CNNM1Q9NRU3 951 aa19.64■□□□□ 0.73
COL1A1-204ENST00000474644 ANKIB1Q9P2G1 1089 aa19.64■□□□□ 0.73
COL1A1-204ENST00000474644 XDHP47989 1333 aa19.64■□□□□ 0.73
COL1A1-204ENST00000474644 A0A1B0GUL6 1792 aa19.63■□□□□ 0.73
COL1A1-204ENST00000474644 CHRNDQ07001 517 aa19.63■□□□□ 0.73
COL1A1-204ENST00000474644 ATP8B2P98198 1209 aa19.62■□□□□ 0.73
COL1A1-204ENST00000474644 LRRC24Q50LG9 513 aa19.62■□□□□ 0.73
COL1A1-204ENST00000474644 C9orf131Q5VYM1 1079 aa19.62■□□□□ 0.73
COL1A1-204ENST00000474644 SUPT20HQ8NEM7 779 aa19.62■□□□□ 0.73
COL1A1-204ENST00000474644 TBC1D16Q8TBP0 767 aa19.62■□□□□ 0.73
COL1A1-204ENST00000474644 ANKRD2Q9GZV1 360 aa19.62■□□□□ 0.73
COL1A1-204ENST00000474644 RNF181Q9P0P0 153 aa19.62■□□□□ 0.73
COL1A1-204ENST00000474644 POLLQ9UGP5 575 aa19.62■□□□□ 0.73
COL1A1-204ENST00000474644 PA2G4Q9UQ80 394 aaKnown RBP19.62■□□□□ 0.73
COL1A1-204ENST00000474644 UFL1O94874 794 aa19.61■□□□□ 0.73
COL1A1-204ENST00000474644 IARSP41252 1262 aaKnown RBP19.61■□□□□ 0.73
COL1A1-204ENST00000474644 POLA2Q14181 598 aa19.61■□□□□ 0.73
COL1A1-204ENST00000474644 SSH3Q8TE77 659 aa19.61■□□□□ 0.73
COL1A1-204ENST00000474644 SIL1Q9H173 461 aa19.61■□□□□ 0.73
COL1A1-204ENST00000474644 COPRSQ9NQ92 184 aa19.61■□□□□ 0.73
COL1A1-204ENST00000474644 GGA1Q9UJY5 639 aa19.61■□□□□ 0.73
COL1A1-204ENST00000474644 RIPOR2Q9Y4F9 1068 aa19.61■□□□□ 0.73
COL1A1-204ENST00000474644 TIAM2Q8IVF5 1701 aa19.61■□□□□ 0.73
COL1A1-204ENST00000474644 COL4A5P29400 1685 aa19.61■□□□□ 0.73
COL1A1-204ENST00000474644 SBF1O95248 1867 aa19.6■□□□□ 0.73
COL1A1-204ENST00000474644 MROH5Q6ZUA9 1318 aa19.6■□□□□ 0.73
COL1A1-204ENST00000474644 EYA2O00167 538 aa19.6■□□□□ 0.73
COL1A1-204ENST00000474644 GPR101Q96P66 508 aaPredicted RBP19.6■□□□□ 0.73
COL1A1-204ENST00000474644 WTIPA6NIX2 430 aaPredicted RBP19.59■□□□□ 0.73
COL1A1-204ENST00000474644 C6orf229H3BNL8 230 aa19.59■□□□□ 0.73
COL1A1-204ENST00000474644 PPIP5K2O43314 1243 aa19.59■□□□□ 0.73
COL1A1-204ENST00000474644 CIAO1O76071 339 aa19.59■□□□□ 0.73
COL1A1-204ENST00000474644 ATP2B4P23634 1241 aa19.59■□□□□ 0.73
COL1A1-204ENST00000474644 AOC3Q16853 763 aa19.59■□□□□ 0.73
COL1A1-204ENST00000474644 ATG9AQ7Z3C6 839 aa19.59■□□□□ 0.73
COL1A1-204ENST00000474644 HELBQ8NG08 1087 aaPredicted RBP19.59■□□□□ 0.73
COL1A1-204ENST00000474644 FBXO3Q9UK99 471 aa19.59■□□□□ 0.73
COL1A1-204ENST00000474644 TAF5LO75529 589 aa19.58■□□□□ 0.72
COL1A1-204ENST00000474644 KIAA2012Q0VF49 1180 aa19.58■□□□□ 0.72
COL1A1-204ENST00000474644 RPAP2Q8IXW5 612 aaPredicted RBP19.58■□□□□ 0.72
COL1A1-204ENST00000474644 VPS33BQ9H267 617 aa19.58■□□□□ 0.72
COL1A1-204ENST00000474644 MED23Q9ULK4 1368 aa19.57■□□□□ 0.72
COL1A1-204ENST00000474644 ZNF804BA4D1E1 1349 aa19.57■□□□□ 0.72
COL1A1-204ENST00000474644 METTL24Q5JXM2 366 aa19.57■□□□□ 0.72
COL1A1-204ENST00000474644 LARGE2Q8N3Y3 721 aa19.57■□□□□ 0.72
COL1A1-204ENST00000474644 VGLL2Q8N8G2 317 aa19.57■□□□□ 0.72
COL1A1-204ENST00000474644 EYA3Q99504 573 aa19.57■□□□□ 0.72
COL1A1-204ENST00000474644 LEMD3Q9Y2U8 911 aa19.57■□□□□ 0.72
COL1A1-204ENST00000474644 IL15P40933 162 aaPredicted RBP19.56■□□□□ 0.72
COL1A1-204ENST00000474644 KCNJ4P48050 445 aa19.56■□□□□ 0.72
COL1A1-204ENST00000474644 WASHC4Q2M389 1173 aa19.56■□□□□ 0.72
COL1A1-204ENST00000474644 SIRT2Q8IXJ6 389 aa19.56■□□□□ 0.72
COL1A1-204ENST00000474644 ZC3H4Q9UPT8 1303 aaKnown RBP19.55■□□□□ 0.72
COL1A1-204ENST00000474644 DICER1Q9UPY3 1922 aaKnown RBP19.55■□□□□ 0.72
COL1A1-204ENST00000474644 SNAP23O00161 211 aa19.55■□□□□ 0.72
COL1A1-204ENST00000474644 RIMBP2O15034 1052 aa19.55■□□□□ 0.72
COL1A1-204ENST00000474644 CENPBP07199 599 aaPredicted RBP19.55■□□□□ 0.72
COL1A1-204ENST00000474644 KLRK1P26718 216 aa19.55■□□□□ 0.72
COL1A1-204ENST00000474644 IRS2Q9Y4H2 1338 aa19.54■□□□□ 0.72
COL1A1-204ENST00000474644 CCDC88AQ3V6T2 1871 aa19.54■□□□□ 0.72
COL1A1-204ENST00000474644 PDE8BO95263 885 aa19.54■□□□□ 0.72
COL1A1-204ENST00000474644 IRX6P78412 446 aaPredicted RBP19.54■□□□□ 0.72
COL1A1-204ENST00000474644 EXOC6Q8TAG9 804 aa19.54■□□□□ 0.72
COL1A1-204ENST00000474644 JDP2Q8WYK2 163 aa19.54■□□□□ 0.72
COL1A1-204ENST00000474644 ZC3H12CQ9C0D7 883 aaKnown RBP19.54■□□□□ 0.72
COL1A1-204ENST00000474644 HMMRO75330 724 aa19.53■□□□□ 0.72
COL1A1-204ENST00000474644 NIM1KQ8IY84 436 aa19.53■□□□□ 0.72
COL1A1-204ENST00000474644 NOP58Q9Y2X3 529 aaKnown RBP19.53■□□□□ 0.72
COL1A1-204ENST00000474644 SURF6O75683 361 aaKnown RBP19.52■□□□□ 0.72
COL1A1-204ENST00000474644 G3BP1Q13283 466 aaKnown RBP eCLIP19.52■□□□□ 0.72
COL1A1-204ENST00000474644 UBE4AQ14139 1066 aa19.52■□□□□ 0.72
COL1A1-204ENST00000474644 PUM3Q15397 648 aaKnown RBP19.52■□□□□ 0.72
COL1A1-204ENST00000474644 TXNRD3Q86VQ6 643 aa19.52■□□□□ 0.72
COL1A1-204ENST00000474644 CEP126Q9P2H0 1117 aa19.52■□□□□ 0.72
COL1A1-204ENST00000474644 PCDHB15Q9Y5E8 787 aa19.52■□□□□ 0.72
COL1A1-204ENST00000474644 FZD9O00144 591 aa19.51■□□□□ 0.71
COL1A1-204ENST00000474644 C1QTNF8P60827 252 aa19.51■□□□□ 0.71
COL1A1-204ENST00000474644 DOK7Q18PE1 504 aa19.51■□□□□ 0.71
COL1A1-204ENST00000474644 C15orf52Q6ZUT6 534 aaKnown RBP19.51■□□□□ 0.71
COL1A1-204ENST00000474644 DBNDD1Q9H9R9 158 aa19.51■□□□□ 0.71
COL1A1-204ENST00000474644 ZNF541Q9H0D2 1346 aa19.51■□□□□ 0.71
COL1A1-204ENST00000474644 ECE2O60344 883 aa19.5■□□□□ 0.71
COL1A1-204ENST00000474644 FGFR2P21802 821 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms