RNA–Protein interactions for RNA: ENST00000474642.1

RTN4R-206, Transcript of reticulon 4 receptor, humanhuman

TSL 4

Gene RTN4R, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-206ENST00000474642 FBXO46Q6PJ61 603 aaPredicted RBP17.45■□□□□ 0.38
RTN4R-206ENST00000474642 COPS6Q7L5N1 327 aa17.45■□□□□ 0.38
RTN4R-206ENST00000474642 TSPYL4Q9UJ04 414 aa17.45■□□□□ 0.38
RTN4R-206ENST00000474642 SCARF1Q14162 830 aa17.44■□□□□ 0.38
RTN4R-206ENST00000474642 NFE2L2Q16236 605 aa17.44■□□□□ 0.38
RTN4R-206ENST00000474642 HABP4Q5JVS0 413 aaKnown RBP17.44■□□□□ 0.38
RTN4R-206ENST00000474642 XAGE3Q8WTP9 111 aa17.44■□□□□ 0.38
RTN4R-206ENST00000474642 CELF1Q92879 486 aaKnown RBP17.44■□□□□ 0.38
RTN4R-206ENST00000474642 ZNF428Q96B54 188 aa17.44■□□□□ 0.38
RTN4R-206ENST00000474642 LRRC37AA6NMS7 1700 aa17.44■□□□□ 0.38
RTN4R-206ENST00000474642 GPR25O00155 361 aa17.43■□□□□ 0.38
RTN4R-206ENST00000474642 NECTIN2Q92692 538 aa17.43■□□□□ 0.38
RTN4R-206ENST00000474642 ZC3H12CQ9C0D7 883 aaKnown RBP17.43■□□□□ 0.38
RTN4R-206ENST00000474642 MOB2Q70IA6 237 aa17.42■□□□□ 0.38
RTN4R-206ENST00000474642 CCER1Q8TC90 406 aaPredicted RBP17.42■□□□□ 0.38
RTN4R-206ENST00000474642 PAPPA2Q9BXP8 1791 aa17.42■□□□□ 0.38
RTN4R-206ENST00000474642 DDX60Q8IY21 1712 aaKnown RBP17.41■□□□□ 0.38
RTN4R-206ENST00000474642 UBE2Q2LH0YL09 131 aa17.41■□□□□ 0.38
RTN4R-206ENST00000474642 TTLL12Q14166 644 aaPredicted RBP17.41■□□□□ 0.38
RTN4R-206ENST00000474642 TBC1D16Q8TBP0 767 aa17.41■□□□□ 0.38
RTN4R-206ENST00000474642 SCN9AQ15858 1988 aa17.4■□□□□ 0.38
RTN4R-206ENST00000474642 FKTNO75072 461 aa17.4■□□□□ 0.38
RTN4R-206ENST00000474642 TM4SF4P48230 202 aa17.4■□□□□ 0.38
RTN4R-206ENST00000474642 ZNF280AP59817 542 aaPredicted RBP17.4■□□□□ 0.38
RTN4R-206ENST00000474642 SF3B3Q15393 1217 aaKnown RBP17.4■□□□□ 0.38
RTN4R-206ENST00000474642 NOM1Q5C9Z4 860 aaKnown RBP17.4■□□□□ 0.38
RTN4R-206ENST00000474642 AGBL3Q8NEM8 1001 aa17.4■□□□□ 0.38
RTN4R-206ENST00000474642 FAM89AQ96GI7 184 aa17.4■□□□□ 0.38
RTN4R-206ENST00000474642 RPS8P62241 208 aaKnown RBP17.39■□□□□ 0.37
RTN4R-206ENST00000474642 RSBN1LQ6PCB5 846 aaPredicted RBP17.39■□□□□ 0.37
RTN4R-206ENST00000474642 PLEKHF1Q96S99 279 aa17.39■□□□□ 0.37
RTN4R-206ENST00000474642 PITPNM2Q9BZ72 1349 aa17.39■□□□□ 0.37
RTN4R-206ENST00000474642 UFL1O94874 794 aa17.38■□□□□ 0.37
RTN4R-206ENST00000474642 SREBF2Q12772 1141 aa17.38■□□□□ 0.37
RTN4R-206ENST00000474642 MKRN3Q13064 507 aaKnown RBP17.38■□□□□ 0.37
RTN4R-206ENST00000474642 MYOZ2Q9NPC6 264 aa17.38■□□□□ 0.37
RTN4R-206ENST00000474642 ANKIB1Q9P2G1 1089 aa17.38■□□□□ 0.37
RTN4R-206ENST00000474642 SCAF8Q9UPN6 1271 aaKnown RBP17.38■□□□□ 0.37
RTN4R-206ENST00000474642 MAPK8IP3Q9UPT6 1336 aa17.38■□□□□ 0.37
RTN4R-206ENST00000474642 KIAA0100Q14667 2235 aaKnown RBP17.37■□□□□ 0.37
RTN4R-206ENST00000474642 USP17L8P0C7I0 530 aa17.37■□□□□ 0.37
RTN4R-206ENST00000474642 RTL5Q5HYW3 569 aaPredicted RBP17.37■□□□□ 0.37
RTN4R-206ENST00000474642 PRAMEF18Q5VWM3 479 aa17.37■□□□□ 0.37
RTN4R-206ENST00000474642 PNNQ9H307 717 aaKnown RBP17.37■□□□□ 0.37
RTN4R-206ENST00000474642 GGA1Q9UJY5 639 aa17.37■□□□□ 0.37
RTN4R-206ENST00000474642 NF2P35240 595 aa17.36■□□□□ 0.37
RTN4R-206ENST00000474642 PODXL2Q9NZ53 605 aa17.36■□□□□ 0.37
RTN4R-206ENST00000474642 ATP5J2-PTCD1G3V325 749 aa17.35■□□□□ 0.37
RTN4R-206ENST00000474642 PLBD2Q8NHP8 589 aa17.35■□□□□ 0.37
RTN4R-206ENST00000474642 IRS4O14654 1257 aaPredicted RBP17.34■□□□□ 0.37
RTN4R-206ENST00000474642 ZNF609O15014 1411 aa17.34■□□□□ 0.37
RTN4R-206ENST00000474642 INTS3Q68E01 1043 aaKnown RBP17.34■□□□□ 0.37
RTN4R-206ENST00000474642 ANKRD13DQ6ZTN6 518 aa17.34■□□□□ 0.37
RTN4R-206ENST00000474642 ISCA1Q9BUE6 129 aa17.34■□□□□ 0.37
RTN4R-206ENST00000474642 R3HDMLQ9H3Y0 253 aa17.34■□□□□ 0.37
RTN4R-206ENST00000474642 BABAM1Q9NWV8 329 aa17.34■□□□□ 0.37
RTN4R-206ENST00000474642 COL4A1P02462 1669 aa17.33■□□□□ 0.37
RTN4R-206ENST00000474642 POTEFA5A3E0 1075 aa17.33■□□□□ 0.36
RTN4R-206ENST00000474642 USP17L3A6NCW0 530 aa17.33■□□□□ 0.36
RTN4R-206ENST00000474642 USP17L4A6NCW7 530 aa17.33■□□□□ 0.36
RTN4R-206ENST00000474642 USP17L1Q7RTZ2 530 aa17.33■□□□□ 0.36
RTN4R-206ENST00000474642 GMLQ99445 158 aa17.33■□□□□ 0.36
RTN4R-206ENST00000474642 CFHR5Q9BXR6 569 aa17.33■□□□□ 0.36
RTN4R-206ENST00000474642 TRIM17Q9Y577 477 aa17.33■□□□□ 0.36
RTN4R-206ENST00000474642 RIPK4P57078 832 aa17.32■□□□□ 0.36
RTN4R-206ENST00000474642 NBPF9Q3BBW0 867 aa17.32■□□□□ 0.36
RTN4R-206ENST00000474642 ARMC9Q7Z3E5 817 aa17.32■□□□□ 0.36
RTN4R-206ENST00000474642 SEC31BQ9NQW1 1179 aa17.32■□□□□ 0.36
RTN4R-206ENST00000474642 CHPF2Q9P2E5 772 aa17.32■□□□□ 0.36
RTN4R-206ENST00000474642 ALDH1A1P00352 501 aa17.31■□□□□ 0.36
RTN4R-206ENST00000474642 PTPN12Q05209 780 aaKnown RBP17.31■□□□□ 0.36
RTN4R-206ENST00000474642 FXR1P51114 621 aaKnown RBP eCLIP17.3■□□□□ 0.36
RTN4R-206ENST00000474642 PRKG1Q13976 671 aa17.3■□□□□ 0.36
RTN4R-206ENST00000474642 PODNQ7Z5L7 613 aa17.3■□□□□ 0.36
RTN4R-206ENST00000474642 OGFOD1Q8N543 542 aa17.3■□□□□ 0.36
RTN4R-206ENST00000474642 PSME4Q14997 1843 aa17.3■□□□□ 0.36
RTN4R-206ENST00000474642 MKI67P46013 3256 aaKnown RBP17.29■□□□□ 0.36
RTN4R-206ENST00000474642 HSP90B1P14625 803 aaKnown RBP17.29■□□□□ 0.36
RTN4R-206ENST00000474642 KRT24Q2M2I5 525 aa17.29■□□□□ 0.36
RTN4R-206ENST00000474642 SPRYD7Q5W111 196 aa17.29■□□□□ 0.36
RTN4R-206ENST00000474642 OTOP1Q7RTM1 612 aa17.29■□□□□ 0.36
RTN4R-206ENST00000474642 XDHP47989 1333 aa17.28■□□□□ 0.36
RTN4R-206ENST00000474642 WNT10BO00744 389 aa17.28■□□□□ 0.36
RTN4R-206ENST00000474642 LMOD3Q0VAK6 560 aa17.28■□□□□ 0.36
RTN4R-206ENST00000474642 CCDC152Q4G0S7 254 aa17.28■□□□□ 0.36
RTN4R-206ENST00000474642 HDGFL1Q5TGJ6 251 aa17.28■□□□□ 0.36
RTN4R-206ENST00000474642 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.28■□□□□ 0.36
RTN4R-206ENST00000474642 ATP2B4P23634 1241 aa17.27■□□□□ 0.36
RTN4R-206ENST00000474642 INHBEP58166 350 aa17.27■□□□□ 0.36
RTN4R-206ENST00000474642 TRIM28Q13263 835 aaKnown RBP17.27■□□□□ 0.36
RTN4R-206ENST00000474642 ZBTB38Q8NAP3 1195 aaPredicted RBP17.27■□□□□ 0.36
RTN4R-206ENST00000474642 FBXW7Q969H0 707 aa17.27■□□□□ 0.36
RTN4R-206ENST00000474642 ANGEL1Q9UNK9 670 aaKnown RBP17.27■□□□□ 0.36
RTN4R-206ENST00000474642 MANSC4A6NHS7 340 aaPredicted RBP17.26■□□□□ 0.35
RTN4R-206ENST00000474642 EN2P19622 333 aaPredicted RBP17.26■□□□□ 0.35
RTN4R-206ENST00000474642 IFNL1Q8IU54 200 aa17.26■□□□□ 0.35
RTN4R-206ENST00000474642 ANKRD18AQ8IVF6 992 aa17.26■□□□□ 0.35
RTN4R-206ENST00000474642 SLC10A4Q96EP9 437 aa17.26■□□□□ 0.35
RTN4R-206ENST00000474642 ERO1AQ96HE7 468 aa17.26■□□□□ 0.35
RTN4R-206ENST00000474642 DBF4Q9UBU7 674 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms