RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 ST5P78524 1137 aa25.32■■□□□ 1.64
SMIM11A-204ENST00000474455 TSHZ3Q63HK5 1081 aa25.31■■□□□ 1.64
SMIM11A-204ENST00000474455 LDHAL6AQ6ZMR3 332 aa25.31■■□□□ 1.64
SMIM11A-204ENST00000474455 PLEKHM2Q8IWE5 1019 aa25.31■■□□□ 1.64
SMIM11A-204ENST00000474455 PSDA5PKW4 1024 aaPredicted RBP25.3■■□□□ 1.64
SMIM11A-204ENST00000474455 CELF1Q92879 486 aaKnown RBP25.3■■□□□ 1.64
SMIM11A-204ENST00000474455 CIZ1Q9ULV3 898 aaPredicted RBP25.3■■□□□ 1.64
SMIM11A-204ENST00000474455 ZBTB7AO95365 584 aa25.3■■□□□ 1.64
SMIM11A-204ENST00000474455 PRKCSHP14314 528 aaPredicted RBP25.3■■□□□ 1.64
SMIM11A-204ENST00000474455 RIPOR2Q9Y4F9 1068 aa25.3■■□□□ 1.64
SMIM11A-204ENST00000474455 RTL9Q8NET4 1388 aa25.29■■□□□ 1.64
SMIM11A-204ENST00000474455 SLC51AQ86UW1 340 aa25.29■■□□□ 1.64
SMIM11A-204ENST00000474455 ERC1Q8IUD2 1116 aa25.29■■□□□ 1.64
SMIM11A-204ENST00000474455 EAF2Q96CJ1 260 aaPredicted RBP25.29■■□□□ 1.64
SMIM11A-204ENST00000474455 PTMSP20962 102 aa25.28■■□□□ 1.64
SMIM11A-204ENST00000474455 SALL3Q9BXA9 1300 aa25.28■■□□□ 1.64
SMIM11A-204ENST00000474455 TRAK2O60296 914 aa25.28■■□□□ 1.64
SMIM11A-204ENST00000474455 IL15P40933 162 aaPredicted RBP25.28■■□□□ 1.64
SMIM11A-204ENST00000474455 CCDC8Q9H0W5 538 aaPredicted RBP25.28■■□□□ 1.64
SMIM11A-204ENST00000474455 CNNM1Q9NRU3 951 aa25.28■■□□□ 1.64
SMIM11A-204ENST00000474455 CIAO1O76071 339 aa25.27■■□□□ 1.64
SMIM11A-204ENST00000474455 TLR7Q9NYK1 1049 aaKnown RBP25.27■■□□□ 1.64
SMIM11A-204ENST00000474455 LRP5O75197 1615 aa25.26■■□□□ 1.63
SMIM11A-204ENST00000474455 XRCC6P12956 609 aaKnown RBP eCLIP25.26■■□□□ 1.63
SMIM11A-204ENST00000474455 DDIT3P35638 169 aa25.26■■□□□ 1.63
SMIM11A-204ENST00000474455 HELBQ8NG08 1087 aaPredicted RBP25.26■■□□□ 1.63
SMIM11A-204ENST00000474455 ATF5Q9Y2D1 282 aaPredicted RBP25.26■■□□□ 1.63
SMIM11A-204ENST00000474455 EIF5BO60841 1220 aaKnown RBP25.26■■□□□ 1.63
SMIM11A-204ENST00000474455 MRE11P49959 708 aa25.26■■□□□ 1.63
SMIM11A-204ENST00000474455 AACSQ86V21 672 aa25.26■■□□□ 1.63
SMIM11A-204ENST00000474455 CLASRPQ8N2M8 674 aaKnown RBP25.26■■□□□ 1.63
SMIM11A-204ENST00000474455 CACNA1SQ13698 1873 aa25.25■■□□□ 1.63
SMIM11A-204ENST00000474455 RIC1Q4ADV7 1423 aa25.25■■□□□ 1.63
SMIM11A-204ENST00000474455 CRY2Q49AN0 593 aa25.25■■□□□ 1.63
SMIM11A-204ENST00000474455 MPHOSPH8Q99549 860 aa25.25■■□□□ 1.63
SMIM11A-204ENST00000474455 A0A1B0GUL6 1792 aa25.25■■□□□ 1.63
SMIM11A-204ENST00000474455 COL11A2P13942 1736 aaPredicted RBP25.25■■□□□ 1.63
SMIM11A-204ENST00000474455 TIMM10P62072 90 aa25.24■■□□□ 1.63
SMIM11A-204ENST00000474455 TNNI3KQ59H18 835 aa25.24■■□□□ 1.63
SMIM11A-204ENST00000474455 BMP2KLQ5H9B9 411 aa25.24■■□□□ 1.63
SMIM11A-204ENST00000474455 SLC16A10Q8TF71 515 aa25.24■■□□□ 1.63
SMIM11A-204ENST00000474455 FPGT-TNNI3KV9GXZ4 949 aa25.24■■□□□ 1.63
SMIM11A-204ENST00000474455 SNAP23O00161 211 aa25.23■■□□□ 1.63
SMIM11A-204ENST00000474455 IGHMBP2P38935 993 aaKnown RBP25.23■■□□□ 1.63
SMIM11A-204ENST00000474455 PDE1AP54750 535 aa25.23■■□□□ 1.63
SMIM11A-204ENST00000474455 ANKRD18AQ8IVF6 992 aa25.23■■□□□ 1.63
SMIM11A-204ENST00000474455 CDC5LQ99459 802 aaKnown RBP25.23■■□□□ 1.63
SMIM11A-204ENST00000474455 BRIP1Q9BX63 1249 aa25.23■■□□□ 1.63
SMIM11A-204ENST00000474455 METTL24Q5JXM2 366 aa25.23■■□□□ 1.63
SMIM11A-204ENST00000474455 DDX46Q7L014 1031 aaKnown RBP25.23■■□□□ 1.63
SMIM11A-204ENST00000474455 FBXO3Q9UK99 471 aa25.23■■□□□ 1.63
SMIM11A-204ENST00000474455 KLRG2A4D1S0 409 aaPredicted RBP25.22■■□□□ 1.63
SMIM11A-204ENST00000474455 TAF5LO75529 589 aa25.22■■□□□ 1.63
SMIM11A-204ENST00000474455 RPS8P62241 208 aaKnown RBP25.22■■□□□ 1.63
SMIM11A-204ENST00000474455 VGLL2Q8N8G2 317 aa25.22■■□□□ 1.63
SMIM11A-204ENST00000474455 CEP126Q9P2H0 1117 aa25.22■■□□□ 1.63
SMIM11A-204ENST00000474455 WTIPA6NIX2 430 aaPredicted RBP25.21■■□□□ 1.63
SMIM11A-204ENST00000474455 MX1P20591 662 aa25.21■■□□□ 1.63
SMIM11A-204ENST00000474455 RPGRQ92834 1020 aaKnown RBP25.21■■□□□ 1.63
SMIM11A-204ENST00000474455 RRAGDQ9NQL2 400 aaPredicted RBP25.21■■□□□ 1.63
SMIM11A-204ENST00000474455 IFIT2P09913 472 aaKnown RBP25.2■■□□□ 1.62
SMIM11A-204ENST00000474455 SPRYD3Q8NCJ5 442 aa25.2■■□□□ 1.62
SMIM11A-204ENST00000474455 SRCAPQ6ZRS2 3230 aa25.2■■□□□ 1.62
SMIM11A-204ENST00000474455 GSPT1P15170 499 aaKnown RBP25.19■■□□□ 1.62
SMIM11A-204ENST00000474455 NEUROD6Q96NK8 337 aa25.19■■□□□ 1.62
SMIM11A-204ENST00000474455 BSDC1Q9NW68 430 aaPredicted RBP25.19■■□□□ 1.62
SMIM11A-204ENST00000474455 DBNLQ9UJU6 430 aaKnown RBP25.19■■□□□ 1.62
SMIM11A-204ENST00000474455 CHRNDQ07001 517 aa25.19■■□□□ 1.62
SMIM11A-204ENST00000474455 DBNDD2Q9BQY9 259 aa25.19■■□□□ 1.62
SMIM11A-204ENST00000474455 A0A1B0GUL7 405 aa25.18■■□□□ 1.62
SMIM11A-204ENST00000474455 GRAPQ13588 217 aa25.18■■□□□ 1.62
SMIM11A-204ENST00000474455 SKOR2Q2VWA4 1001 aaPredicted RBP25.18■■□□□ 1.62
SMIM11A-204ENST00000474455 GRAPLQ8TC17 118 aaPredicted RBP25.18■■□□□ 1.62
SMIM11A-204ENST00000474455 GBP4Q96PP9 640 aa25.18■■□□□ 1.62
SMIM11A-204ENST00000474455 MINPP1Q9UNW1 487 aa25.18■■□□□ 1.62
SMIM11A-204ENST00000474455 ZNF609O15014 1411 aa25.18■■□□□ 1.62
SMIM11A-204ENST00000474455 PDE8BO95263 885 aa25.17■■□□□ 1.62
SMIM11A-204ENST00000474455 SRGNP10124 158 aa25.17■■□□□ 1.62
SMIM11A-204ENST00000474455 MTFR1LQ9H019 292 aa25.17■■□□□ 1.62
SMIM11A-204ENST00000474455 OSBPL3Q9H4L5 887 aa25.17■■□□□ 1.62
SMIM11A-204ENST00000474455 STAP2Q9UGK3 403 aa25.17■■□□□ 1.62
SMIM11A-204ENST00000474455 ADORA1P30542 326 aa25.17■■□□□ 1.62
SMIM11A-204ENST00000474455 PI4K2BQ8TCG2 481 aa25.17■■□□□ 1.62
SMIM11A-204ENST00000474455 RBM17Q96I25 401 aaKnown RBP25.17■■□□□ 1.62
SMIM11A-204ENST00000474455 MROH5Q6ZUA9 1318 aa25.17■■□□□ 1.62
SMIM11A-204ENST00000474455 CHRNA5P30532 468 aa25.16■■□□□ 1.62
SMIM11A-204ENST00000474455 PDE6BP35913 854 aa25.16■■□□□ 1.62
SMIM11A-204ENST00000474455 TTC22Q5TAA0 569 aa25.16■■□□□ 1.62
SMIM11A-204ENST00000474455 HOXA10P31260 410 aaPredicted RBP25.15■■□□□ 1.62
SMIM11A-204ENST00000474455 GPR108Q9NPR9 543 aa25.15■■□□□ 1.62
SMIM11A-204ENST00000474455 MAP4K4O95819 1239 aaPredicted RBP25.15■■□□□ 1.62
SMIM11A-204ENST00000474455 AK9Q5TCS8 1911 aa25.14■■□□□ 1.62
SMIM11A-204ENST00000474455 CLCN1P35523 988 aa25.14■■□□□ 1.61
SMIM11A-204ENST00000474455 C2CD5Q86YS7 1000 aa25.14■■□□□ 1.61
SMIM11A-204ENST00000474455 ATP2B3Q16720 1220 aa25.13■■□□□ 1.61
SMIM11A-204ENST00000474455 SLX4Q8IY92 1834 aa25.13■■□□□ 1.61
SMIM11A-204ENST00000474455 KIF13BQ9NQT8 1826 aa25.13■■□□□ 1.61
SMIM11A-204ENST00000474455 FGFR2P21802 821 aa25.13■■□□□ 1.61
SMIM11A-204ENST00000474455 RAB3GAP1Q15042 981 aa25.13■■□□□ 1.61
SMIM11A-204ENST00000474455 XAGE2Q96GT9 111 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms