RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 XPO4Q9C0E2 1151 aaKnown RBP21.72■■□□□ 1.07
ECHDC1-214ENST00000474289 NAT10Q9H0A0 1025 aaKnown RBP21.72■■□□□ 1.07
ECHDC1-214ENST00000474289 MYH15Q9Y2K3 1946 aa21.72■■□□□ 1.07
ECHDC1-214ENST00000474289 AGLP35573 1532 aa21.72■■□□□ 1.07
ECHDC1-214ENST00000474289 ETF1P62495 437 aaKnown RBP21.71■■□□□ 1.07
ECHDC1-214ENST00000474289 FAM160A1Q05DH4 1040 aa21.71■■□□□ 1.07
ECHDC1-214ENST00000474289 AACSQ86V21 672 aa21.71■■□□□ 1.07
ECHDC1-214ENST00000474289 HOMER1Q86YM7 354 aa21.71■■□□□ 1.07
ECHDC1-214ENST00000474289 PA2G4Q9UQ80 394 aaKnown RBP21.71■■□□□ 1.07
ECHDC1-214ENST00000474289 TUBB4AP04350 444 aa21.71■■□□□ 1.07
ECHDC1-214ENST00000474289 KRBA2Q6ZNG9 492 aa21.71■■□□□ 1.07
ECHDC1-214ENST00000474289 DNAI1Q9UI46 699 aa21.71■■□□□ 1.07
ECHDC1-214ENST00000474289 MED23Q9ULK4 1368 aa21.71■■□□□ 1.07
ECHDC1-214ENST00000474289 SMC2O95347 1197 aa21.7■■□□□ 1.06
ECHDC1-214ENST00000474289 PHLPP2Q6ZVD8 1323 aa21.7■■□□□ 1.06
ECHDC1-214ENST00000474289 PI4KAP2A4QPH2 592 aa21.7■■□□□ 1.06
ECHDC1-214ENST00000474289 TADA3O75528 432 aa21.7■■□□□ 1.06
ECHDC1-214ENST00000474289 MTX1Q13505 466 aa21.7■■□□□ 1.06
ECHDC1-214ENST00000474289 PI4KAP1Q8N8J0 262 aa21.7■■□□□ 1.06
ECHDC1-214ENST00000474289 DNAAF4Q8WXU2 420 aa21.7■■□□□ 1.06
ECHDC1-214ENST00000474289 IFNKQ9P0W0 207 aa21.7■■□□□ 1.06
ECHDC1-214ENST00000474289 HMG20BQ9P0W2 317 aa21.7■■□□□ 1.06
ECHDC1-214ENST00000474289 TSGA10IPQ3SY00 556 aa21.69■■□□□ 1.06
ECHDC1-214ENST00000474289 ZNF589Q86UQ0 364 aaPredicted RBP21.69■■□□□ 1.06
ECHDC1-214ENST00000474289 USP28Q96RU2 1077 aa21.69■■□□□ 1.06
ECHDC1-214ENST00000474289 CHMP4AQ9BY43 222 aa21.69■■□□□ 1.06
ECHDC1-214ENST00000474289 ZCCHC17Q9NP64 241 aaKnown RBP21.69■■□□□ 1.06
ECHDC1-214ENST00000474289 FANCGO15287 622 aa21.69■■□□□ 1.06
ECHDC1-214ENST00000474289 SASH3O75995 380 aa21.69■■□□□ 1.06
ECHDC1-214ENST00000474289 FSIP1Q8NA03 581 aa21.69■■□□□ 1.06
ECHDC1-214ENST00000474289 MNS1Q8NEH6 495 aa21.68■■□□□ 1.06
ECHDC1-214ENST00000474289 TBC1D8O95759 1140 aa21.68■■□□□ 1.06
ECHDC1-214ENST00000474289 EIF2S2P20042 333 aaKnown RBP21.68■■□□□ 1.06
ECHDC1-214ENST00000474289 OAS2P29728 719 aaKnown RBP21.68■■□□□ 1.06
ECHDC1-214ENST00000474289 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.68■■□□□ 1.06
ECHDC1-214ENST00000474289 JCADQ9P266 1359 aa21.68■■□□□ 1.06
ECHDC1-214ENST00000474289 FOSBP53539 338 aa21.67■■□□□ 1.06
ECHDC1-214ENST00000474289 DPCR1Q3MIW9 517 aa21.67■■□□□ 1.06
ECHDC1-214ENST00000474289 FSD1Q9BTV5 496 aa21.67■■□□□ 1.06
ECHDC1-214ENST00000474289 ATP8B1O43520 1251 aa21.67■■□□□ 1.06
ECHDC1-214ENST00000474289 HSP90B1P14625 803 aaKnown RBP21.67■■□□□ 1.06
ECHDC1-214ENST00000474289 FAM69CQ0P6D2 419 aa21.67■■□□□ 1.06
ECHDC1-214ENST00000474289 TRIM65Q6PJ69 517 aa21.67■■□□□ 1.06
ECHDC1-214ENST00000474289 ERC1Q8IUD2 1116 aa21.67■■□□□ 1.06
ECHDC1-214ENST00000474289 ADAMTS13Q76LX8 1427 aa21.66■■□□□ 1.06
ECHDC1-214ENST00000474289 EFCAB8A8MWE9 144 aa21.66■■□□□ 1.06
ECHDC1-214ENST00000474289 NRDCO43847 1150 aa21.66■■□□□ 1.06
ECHDC1-214ENST00000474289 Q6ZUG5 572 aa21.66■■□□□ 1.06
ECHDC1-214ENST00000474289 CARD6Q9BX69 1037 aa21.66■■□□□ 1.06
ECHDC1-214ENST00000474289 SRRTQ9BXP5 876 aaKnown RBP21.66■■□□□ 1.06
ECHDC1-214ENST00000474289 ME1P48163 572 aa21.66■■□□□ 1.06
ECHDC1-214ENST00000474289 HDGFP51858 240 aaKnown RBP21.66■■□□□ 1.06
ECHDC1-214ENST00000474289 SCRN1Q12765 414 aa21.66■■□□□ 1.06
ECHDC1-214ENST00000474289 ZSCAN26Q16670 478 aa21.66■■□□□ 1.06
ECHDC1-214ENST00000474289 CCDC158Q5M9N0 1113 aa21.66■■□□□ 1.06
ECHDC1-214ENST00000474289 SMARCC2Q8TAQ2 1214 aa21.66■■□□□ 1.06
ECHDC1-214ENST00000474289 CHPF2Q9P2E5 772 aa21.66■■□□□ 1.06
ECHDC1-214ENST00000474289 URI1O94763 535 aaPredicted RBP21.65■■□□□ 1.06
ECHDC1-214ENST00000474289 GPS2Q13227 327 aa21.65■■□□□ 1.06
ECHDC1-214ENST00000474289 NAA16Q6N069 864 aaPredicted RBP21.65■■□□□ 1.06
ECHDC1-214ENST00000474289 EAF2Q96CJ1 260 aaPredicted RBP21.65■■□□□ 1.06
ECHDC1-214ENST00000474289 EPC1Q9H2F5 836 aa21.65■■□□□ 1.06
ECHDC1-214ENST00000474289 RASSF4Q9H2L5 321 aa21.65■■□□□ 1.06
ECHDC1-214ENST00000474289 BABAM1Q9NWV8 329 aa21.65■■□□□ 1.06
ECHDC1-214ENST00000474289 TSPOAP1O95153 1857 aa21.65■■□□□ 1.06
ECHDC1-214ENST00000474289 SMC1AQ14683 1233 aaKnown RBP21.65■■□□□ 1.06
ECHDC1-214ENST00000474289 NUTM2GQ5VZR2 741 aa21.65■■□□□ 1.06
ECHDC1-214ENST00000474289 FMR1NBQ8N0W7 255 aaPredicted RBP21.65■■□□□ 1.06
ECHDC1-214ENST00000474289 NEK1Q96PY6 1258 aa21.65■■□□□ 1.06
ECHDC1-214ENST00000474289 CCDC8Q9H0W5 538 aaPredicted RBP21.65■■□□□ 1.06
ECHDC1-214ENST00000474289 BOLA2Q9H3K6 86 aa21.65■■□□□ 1.06
ECHDC1-214ENST00000474289 TAF5LO75529 589 aa21.64■■□□□ 1.05
ECHDC1-214ENST00000474289 CC2D1AQ6P1N0 951 aaPredicted RBP21.64■■□□□ 1.05
ECHDC1-214ENST00000474289 LTV1Q96GA3 475 aaPredicted RBP21.64■■□□□ 1.05
ECHDC1-214ENST00000474289 SDF4Q9BRK5 362 aa21.64■■□□□ 1.05
ECHDC1-214ENST00000474289 TLR7Q9NYK1 1049 aaKnown RBP21.64■■□□□ 1.05
ECHDC1-214ENST00000474289 RSPH14Q9UHP6 348 aa21.64■■□□□ 1.05
ECHDC1-214ENST00000474289 PARP3Q9Y6F1 533 aa21.64■■□□□ 1.05
ECHDC1-214ENST00000474289 EVCP57679 992 aa21.64■■□□□ 1.05
ECHDC1-214ENST00000474289 KRT32Q14532 448 aa21.64■■□□□ 1.05
ECHDC1-214ENST00000474289 LRRFIP1Q32MZ4 808 aaKnown RBP21.64■■□□□ 1.05
ECHDC1-214ENST00000474289 CCDC34Q96HJ3 373 aa21.64■■□□□ 1.05
ECHDC1-214ENST00000474289 BPIFA3Q9BQP9 254 aa21.64■■□□□ 1.05
ECHDC1-214ENST00000474289 LCMT1Q9UIC8 334 aa21.64■■□□□ 1.05
ECHDC1-214ENST00000474289 TMEM2Q9UHN6 1383 aa21.63■■□□□ 1.05
ECHDC1-214ENST00000474289 USPL1Q5W0Q7 1092 aa21.63■■□□□ 1.05
ECHDC1-214ENST00000474289 CCDC191Q8NCU4 936 aa21.63■■□□□ 1.05
ECHDC1-214ENST00000474289 MYO1CO00159 1063 aa21.63■■□□□ 1.05
ECHDC1-214ENST00000474289 CCP110O43303 1012 aa21.63■■□□□ 1.05
ECHDC1-214ENST00000474289 SASH1O94885 1247 aa21.63■■□□□ 1.05
ECHDC1-214ENST00000474289 TPM1P09493 284 aa21.63■■□□□ 1.05
ECHDC1-214ENST00000474289 TNNT3P45378 269 aaPredicted RBP21.63■■□□□ 1.05
ECHDC1-214ENST00000474289 DHX8Q14562 1220 aaKnown RBP21.63■■□□□ 1.05
ECHDC1-214ENST00000474289 NSUN7Q8NE18 718 aaKnown RBP21.63■■□□□ 1.05
ECHDC1-214ENST00000474289 FMNL2Q96PY5 1086 aa21.63■■□□□ 1.05
ECHDC1-214ENST00000474289 TRIM66O15016 1216 aa21.62■■□□□ 1.05
ECHDC1-214ENST00000474289 ANXA1P04083 346 aa21.62■■□□□ 1.05
ECHDC1-214ENST00000474289 NGDNQ8NEJ9 315 aaKnown RBP21.62■■□□□ 1.05
ECHDC1-214ENST00000474289 MRPS27Q92552 414 aaKnown RBP21.62■■□□□ 1.05
ECHDC1-214ENST00000474289 ZNF396Q96N95 335 aaPredicted RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms