RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 KRTAP9-6A0A140TA67 174 aa7.65□□□□□ -1.18
TMEM50B-208ENST00000474272 CDC25BP30305 580 aa7.65□□□□□ -1.18
TMEM50B-208ENST00000474272 SETDB1Q15047 1291 aa7.65□□□□□ -1.18
TMEM50B-208ENST00000474272 C16orf46Q6P387 395 aa7.65□□□□□ -1.18
TMEM50B-208ENST00000474272 AGGF1Q8N302 714 aaeCLIP7.65□□□□□ -1.18
TMEM50B-208ENST00000474272 AKTIPQ9H8T0 292 aa7.65□□□□□ -1.18
TMEM50B-208ENST00000474272 UBAP1LF5GYI3 381 aa7.64□□□□□ -1.19
TMEM50B-208ENST00000474272 TNFRSF10BO14763 440 aa7.64□□□□□ -1.19
TMEM50B-208ENST00000474272 BRD2P25440 801 aaKnown RBP7.64□□□□□ -1.19
TMEM50B-208ENST00000474272 SWI5Q1ZZU3 235 aa7.64□□□□□ -1.19
TMEM50B-208ENST00000474272 PRR23CQ6ZRP0 262 aa7.64□□□□□ -1.19
TMEM50B-208ENST00000474272 NLRP13Q86W25 1043 aa7.64□□□□□ -1.19
TMEM50B-208ENST00000474272 F8W735 103 aaPredicted RBP7.63□□□□□ -1.19
TMEM50B-208ENST00000474272 ZBTB39O15060 712 aa7.63□□□□□ -1.19
TMEM50B-208ENST00000474272 ATP11AP98196 1134 aa7.63□□□□□ -1.19
TMEM50B-208ENST00000474272 TXNDC11Q6PKC3 985 aa7.63□□□□□ -1.19
TMEM50B-208ENST00000474272 LACRTQ9GZZ8 138 aa7.63□□□□□ -1.19
TMEM50B-208ENST00000474272 LINC01387J3KSC0 135 aa7.62□□□□□ -1.19
TMEM50B-208ENST00000474272 ADAMTSL4Q6UY14 1074 aa7.62□□□□□ -1.19
TMEM50B-208ENST00000474272 DZIP1LQ8IYY4 767 aaKnown RBP7.62□□□□□ -1.19
TMEM50B-208ENST00000474272 GALNT11Q8NCW6 608 aa7.62□□□□□ -1.19
TMEM50B-208ENST00000474272 GPR152Q8TDT2 470 aa7.62□□□□□ -1.19
TMEM50B-208ENST00000474272 MRPL18Q9H0U6 180 aaKnown RBP7.62□□□□□ -1.19
TMEM50B-208ENST00000474272 RBSNQ9H1K0 784 aa7.62□□□□□ -1.19
TMEM50B-208ENST00000474272 SOX18P35713 384 aa7.61□□□□□ -1.19
TMEM50B-208ENST00000474272 SRPK2P78362 688 aaKnown RBP7.61□□□□□ -1.19
TMEM50B-208ENST00000474272 TMEM164Q5U3C3 297 aa7.61□□□□□ -1.19
TMEM50B-208ENST00000474272 PIK3R5Q8WYR1 880 aa7.61□□□□□ -1.19
TMEM50B-208ENST00000474272 CXXC1Q9P0U4 656 aaPredicted RBP7.61□□□□□ -1.19
TMEM50B-208ENST00000474272 CYP2E1P05181 493 aaPredicted RBP7.6□□□□□ -1.19
TMEM50B-208ENST00000474272 HOXD8P13378 290 aaPredicted RBP7.6□□□□□ -1.19
TMEM50B-208ENST00000474272 GLB1P16278 677 aa7.6□□□□□ -1.19
TMEM50B-208ENST00000474272 ZAP70P43403 619 aa7.6□□□□□ -1.19
TMEM50B-208ENST00000474272 CEP135Q66GS9 1140 aa7.6□□□□□ -1.19
TMEM50B-208ENST00000474272 TMEM130Q8N3G9 435 aa7.6□□□□□ -1.19
TMEM50B-208ENST00000474272 OR13H1Q8NG92 308 aa7.6□□□□□ -1.19
TMEM50B-208ENST00000474272 RNF112Q9ULX5 631 aa7.6□□□□□ -1.19
TMEM50B-208ENST00000474272 PPME1Q9Y570 386 aa7.6□□□□□ -1.19
TMEM50B-208ENST00000474272 WISP1O95388 367 aa7.59□□□□□ -1.19
TMEM50B-208ENST00000474272 FSTP19883 344 aa7.59□□□□□ -1.19
TMEM50B-208ENST00000474272 ELOAQ14241 798 aaKnown RBP7.59□□□□□ -1.19
TMEM50B-208ENST00000474272 UBL7Q96S82 380 aaPredicted RBP7.59□□□□□ -1.19
TMEM50B-208ENST00000474272 CARD10Q9BWT7 1032 aa7.59□□□□□ -1.19
TMEM50B-208ENST00000474272 RASSF4Q9H2L5 321 aa7.59□□□□□ -1.19
TMEM50B-208ENST00000474272 KCNK4Q9NYG8 393 aa7.59□□□□□ -1.19
TMEM50B-208ENST00000474272 SLAIN2Q9P270 581 aa7.59□□□□□ -1.19
TMEM50B-208ENST00000474272 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.59□□□□□ -1.19
TMEM50B-208ENST00000474272 SSTR4P31391 388 aa7.58□□□□□ -1.2
TMEM50B-208ENST00000474272 SCNN1AP37088 669 aa7.58□□□□□ -1.2
TMEM50B-208ENST00000474272 HYAL2Q12891 473 aa7.58□□□□□ -1.2
TMEM50B-208ENST00000474272 TTC39BQ5VTQ0 682 aaPredicted RBP7.58□□□□□ -1.2
TMEM50B-208ENST00000474272 ATCAYQ86WG3 371 aa7.57□□□□□ -1.2
TMEM50B-208ENST00000474272 SPACA7Q96KW9 195 aa7.57□□□□□ -1.2
TMEM50B-208ENST00000474272 SH2B1Q9NRF2 756 aaPredicted RBP7.57□□□□□ -1.2
TMEM50B-208ENST00000474272 STIM2Q9P246 746 aa7.57□□□□□ -1.2
TMEM50B-208ENST00000474272 SEPT3Q9UH03 358 aa7.57□□□□□ -1.2
TMEM50B-208ENST00000474272 DDX3YO15523 660 aaKnown RBP7.56□□□□□ -1.2
TMEM50B-208ENST00000474272 COL26A1Q96A83 441 aa7.56□□□□□ -1.2
TMEM50B-208ENST00000474272 ATG7O95352 703 aa7.55□□□□□ -1.2
TMEM50B-208ENST00000474272 CDC27P30260 824 aa7.55□□□□□ -1.2
TMEM50B-208ENST00000474272 ACAD11Q709F0 780 aa7.55□□□□□ -1.2
TMEM50B-208ENST00000474272 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.55□□□□□ -1.2
TMEM50B-208ENST00000474272 MAP4K3Q8IVH8 894 aa7.55□□□□□ -1.2
TMEM50B-208ENST00000474272 PCMTD2Q9NV79 361 aa7.55□□□□□ -1.2
TMEM50B-208ENST00000474272 KANSL3Q9P2N6 904 aa7.55□□□□□ -1.2
TMEM50B-208ENST00000474272 TM4SF5O14894 197 aa7.54□□□□□ -1.2
TMEM50B-208ENST00000474272 PTCD1O75127 700 aaKnown RBP7.54□□□□□ -1.2
TMEM50B-208ENST00000474272 SMNDC1O75940 238 aaKnown RBP eCLIP7.54□□□□□ -1.2
TMEM50B-208ENST00000474272 ACPPP15309 386 aa7.54□□□□□ -1.2
TMEM50B-208ENST00000474272 CD68P34810 354 aaPredicted RBP7.54□□□□□ -1.2
TMEM50B-208ENST00000474272 Q6ZS46 218 aa7.54□□□□□ -1.2
TMEM50B-208ENST00000474272 POP1Q99575 1024 aaKnown RBP7.54□□□□□ -1.2
TMEM50B-208ENST00000474272 MUC3BQ9H195 1237 aa7.54□□□□□ -1.2
TMEM50B-208ENST00000474272 SRA1Q9HD15 236 aaKnown RBP7.54□□□□□ -1.2
TMEM50B-208ENST00000474272 ABI2Q9NYB9 513 aaPredicted RBP7.54□□□□□ -1.2
TMEM50B-208ENST00000474272 FAM13BQ9NYF5 915 aa7.54□□□□□ -1.2
TMEM50B-208ENST00000474272 TMEM63CQ9P1W3 806 aa7.54□□□□□ -1.2
TMEM50B-208ENST00000474272 CNTN3Q9P232 1028 aa7.54□□□□□ -1.2
TMEM50B-208ENST00000474272 FNDC3AQ9Y2H6 1198 aaKnown RBP7.54□□□□□ -1.2
TMEM50B-208ENST00000474272 TRPA1O75762 1119 aa7.53□□□□□ -1.2
TMEM50B-208ENST00000474272 MED26O95402 600 aa7.53□□□□□ -1.2
TMEM50B-208ENST00000474272 EPHA1P21709 976 aa7.53□□□□□ -1.2
TMEM50B-208ENST00000474272 NCAPG2Q86XI2 1143 aa7.53□□□□□ -1.2
TMEM50B-208ENST00000474272 ARMC10Q8N2F6 343 aa7.53□□□□□ -1.2
TMEM50B-208ENST00000474272 CEP120Q8N960 986 aa7.53□□□□□ -1.2
TMEM50B-208ENST00000474272 CLP1Q92989 425 aaKnown RBP7.53□□□□□ -1.2
TMEM50B-208ENST00000474272 NUDT16Q96DE0 195 aaKnown RBP7.53□□□□□ -1.2
TMEM50B-208ENST00000474272 PBX4Q9BYU1 374 aa7.53□□□□□ -1.2
TMEM50B-208ENST00000474272 ELP3Q9H9T3 547 aa7.53□□□□□ -1.2
TMEM50B-208ENST00000474272 RAXQ9Y2V3 346 aa7.53□□□□□ -1.2
TMEM50B-208ENST00000474272 A6NHS1 94 aa7.52□□□□□ -1.21
TMEM50B-208ENST00000474272 FSCN2O14926 492 aa7.52□□□□□ -1.21
TMEM50B-208ENST00000474272 KIF4AO95239 1232 aa7.52□□□□□ -1.21
TMEM50B-208ENST00000474272 KIAA1211Q6ZU35 1233 aa7.52□□□□□ -1.21
TMEM50B-208ENST00000474272 UBASH3BQ8TF42 649 aa7.52□□□□□ -1.21
TMEM50B-208ENST00000474272 KLHDC7BQ96G42 594 aa7.52□□□□□ -1.21
TMEM50B-208ENST00000474272 STOML1Q9UBI4 398 aa7.52□□□□□ -1.21
TMEM50B-208ENST00000474272 ADAM11O75078 769 aa7.51□□□□□ -1.21
TMEM50B-208ENST00000474272 TGFB1P01137 390 aa7.51□□□□□ -1.21
TMEM50B-208ENST00000474272 ATP2B4P23634 1241 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms