RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 GRNP28799 593 aaKnown RBP5.35□□□□□ -1.55
CCDC39-203ENST00000473854 CD68P34810 354 aaPredicted RBP5.35□□□□□ -1.55
CCDC39-203ENST00000473854 FAM117BQ6P1L5 589 aa5.35□□□□□ -1.55
CCDC39-203ENST00000473854 FBXL18Q96ME1 805 aa5.35□□□□□ -1.55
CCDC39-203ENST00000473854 MKRN1Q9UHC7 482 aaKnown RBP5.35□□□□□ -1.55
CCDC39-203ENST00000473854 HMX2A2RU54 273 aa5.34□□□□□ -1.55
CCDC39-203ENST00000473854 SART1O43290 800 aaKnown RBP5.34□□□□□ -1.55
CCDC39-203ENST00000473854 ATP9BO43861 1147 aa5.34□□□□□ -1.55
CCDC39-203ENST00000473854 MICAL2O94851 1124 aa5.34□□□□□ -1.55
CCDC39-203ENST00000473854 IGFBP4P22692 258 aa5.34□□□□□ -1.55
CCDC39-203ENST00000473854 FAM20CQ8IXL6 584 aa5.34□□□□□ -1.55
CCDC39-203ENST00000473854 ABI1Q8IZP0 508 aa5.34□□□□□ -1.55
CCDC39-203ENST00000473854 KLHL23Q8NBE8 558 aa5.34□□□□□ -1.55
CCDC39-203ENST00000473854 SHKBP1Q8TBC3 707 aa5.34□□□□□ -1.55
CCDC39-203ENST00000473854 ZNF594Q96JF6 807 aaPredicted RBP5.34□□□□□ -1.55
CCDC39-203ENST00000473854 PIM2Q9P1W9 311 aa5.34□□□□□ -1.55
CCDC39-203ENST00000473854 FAM177BA6PVY3 158 aa5.33□□□□□ -1.56
CCDC39-203ENST00000473854 XYLBO75191 536 aa5.33□□□□□ -1.56
CCDC39-203ENST00000473854 DUOXA2Q1HG44 320 aa5.33□□□□□ -1.56
CCDC39-203ENST00000473854 ANKRD34AQ69YU3 496 aa5.33□□□□□ -1.56
CCDC39-203ENST00000473854 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.33□□□□□ -1.56
CCDC39-203ENST00000473854 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.33□□□□□ -1.56
CCDC39-203ENST00000473854 J3QW42 95 aa5.32□□□□□ -1.56
CCDC39-203ENST00000473854 RASA1P20936 1047 aa5.32□□□□□ -1.56
CCDC39-203ENST00000473854 DGKZQ13574 1117 aa5.32□□□□□ -1.56
CCDC39-203ENST00000473854 MCM6Q14566 821 aa5.32□□□□□ -1.56
CCDC39-203ENST00000473854 C11orf91Q3C1V1 193 aa5.32□□□□□ -1.56
CCDC39-203ENST00000473854 BEND4Q6ZU67 534 aa5.32□□□□□ -1.56
CCDC39-203ENST00000473854 VSIG10LQ86VR7 867 aa5.32□□□□□ -1.56
CCDC39-203ENST00000473854 BCANQ96GW7 911 aa5.32□□□□□ -1.56
CCDC39-203ENST00000473854 NSUN5Q96P11 429 aaKnown RBP5.32□□□□□ -1.56
CCDC39-203ENST00000473854 KCNF1Q9H3M0 494 aa5.32□□□□□ -1.56
CCDC39-203ENST00000473854 ATG3Q9NT62 314 aa5.32□□□□□ -1.56
CCDC39-203ENST00000473854 KLK14Q9P0G3 267 aa5.32□□□□□ -1.56
CCDC39-203ENST00000473854 COG6Q9Y2V7 657 aa5.32□□□□□ -1.56
CCDC39-203ENST00000473854 RTCBQ9Y3I0 505 aaKnown RBP5.32□□□□□ -1.56
CCDC39-203ENST00000473854 WDR64B1ANS9 1081 aa5.31□□□□□ -1.56
CCDC39-203ENST00000473854 SMNDC1O75940 238 aaKnown RBP eCLIP5.31□□□□□ -1.56
CCDC39-203ENST00000473854 CBLL1Q75N03 491 aa5.31□□□□□ -1.56
CCDC39-203ENST00000473854 GALNT11Q8NCW6 608 aa5.31□□□□□ -1.56
CCDC39-203ENST00000473854 VTI1AQ96AJ9 217 aa5.31□□□□□ -1.56
CCDC39-203ENST00000473854 SPACA7Q96KW9 195 aa5.31□□□□□ -1.56
CCDC39-203ENST00000473854 HINFPQ9BQA5 517 aa5.31□□□□□ -1.56
CCDC39-203ENST00000473854 TRIM33Q9UPN9 1127 aa5.31□□□□□ -1.56
CCDC39-203ENST00000473854 LEMD3Q9Y2U8 911 aa5.31□□□□□ -1.56
CCDC39-203ENST00000473854 LINC01387J3KSC0 135 aa5.3□□□□□ -1.56
CCDC39-203ENST00000473854 FOXO3O43524 673 aa5.3□□□□□ -1.56
CCDC39-203ENST00000473854 MMP20O60882 483 aa5.3□□□□□ -1.56
CCDC39-203ENST00000473854 DKK1O94907 266 aa5.3□□□□□ -1.56
CCDC39-203ENST00000473854 WISP1O95388 367 aa5.3□□□□□ -1.56
CCDC39-203ENST00000473854 PRNPP04156 253 aa5.3□□□□□ -1.56
CCDC39-203ENST00000473854 BMP3P12645 472 aa5.3□□□□□ -1.56
CCDC39-203ENST00000473854 ITGB5P18084 799 aa5.3□□□□□ -1.56
CCDC39-203ENST00000473854 CDC27P30260 824 aa5.3□□□□□ -1.56
CCDC39-203ENST00000473854 KIAA1211Q6ZU35 1233 aa5.3□□□□□ -1.56
CCDC39-203ENST00000473854 AGBL5Q8NDL9 886 aa5.3□□□□□ -1.56
CCDC39-203ENST00000473854 MYO19Q96H55 970 aa5.3□□□□□ -1.56
CCDC39-203ENST00000473854 METTL22Q9BUU2 404 aaPredicted RBP5.3□□□□□ -1.56
CCDC39-203ENST00000473854 FOSL1P15407 271 aa5.29□□□□□ -1.56
CCDC39-203ENST00000473854 LARP1Q6PKG0 1096 aaKnown RBP5.29□□□□□ -1.56
CCDC39-203ENST00000473854 CMTR1Q8N1G2 835 aaKnown RBP5.29□□□□□ -1.56
CCDC39-203ENST00000473854 RNF208Q9H0X6 261 aa5.29□□□□□ -1.56
CCDC39-203ENST00000473854 CCDC39Q9UFE4 941 aa5.29□□□□□ -1.56
CCDC39-203ENST00000473854 FSCN2O14926 492 aa5.28□□□□□ -1.56
CCDC39-203ENST00000473854 GAS2O43903 313 aaKnown RBP5.28□□□□□ -1.56
CCDC39-203ENST00000473854 RAD21O60216 631 aa5.28□□□□□ -1.56
CCDC39-203ENST00000473854 HYAL2Q12891 473 aa5.28□□□□□ -1.56
CCDC39-203ENST00000473854 MSMPQ1L6U9 139 aa5.28□□□□□ -1.56
CCDC39-203ENST00000473854 FDX2Q6P4F2 183 aa5.28□□□□□ -1.56
CCDC39-203ENST00000473854 NLRP13Q86W25 1043 aa5.28□□□□□ -1.56
CCDC39-203ENST00000473854 TP53INP2Q8IXH6 220 aa5.28□□□□□ -1.56
CCDC39-203ENST00000473854 WNT8BQ93098 351 aa5.28□□□□□ -1.56
CCDC39-203ENST00000473854 OSBPL1AQ9BXW6 950 aa5.28□□□□□ -1.56
CCDC39-203ENST00000473854 FBLN7Q53RD9 439 aa5.27□□□□□ -1.57
CCDC39-203ENST00000473854 RGL4Q8IZJ4 473 aa5.27□□□□□ -1.57
CCDC39-203ENST00000473854 MFSD14AQ96MC6 490 aa5.27□□□□□ -1.57
CCDC39-203ENST00000473854 QTRT2Q9H974 415 aaKnown RBP5.27□□□□□ -1.57
CCDC39-203ENST00000473854 SEC31BQ9NQW1 1179 aa5.27□□□□□ -1.57
CCDC39-203ENST00000473854 BSDC1Q9NW68 430 aaPredicted RBP5.27□□□□□ -1.57
CCDC39-203ENST00000473854 DBX1A6NMT0 343 aa5.26□□□□□ -1.57
CCDC39-203ENST00000473854 BIN1O00499 593 aa5.26□□□□□ -1.57
CCDC39-203ENST00000473854 OPLAHO14841 1288 aa5.26□□□□□ -1.57
CCDC39-203ENST00000473854 HOXA10P31260 410 aaPredicted RBP5.26□□□□□ -1.57
CCDC39-203ENST00000473854 CABP4P57796 275 aa5.26□□□□□ -1.57
CCDC39-203ENST00000473854 PKN1Q16512 942 aa5.26□□□□□ -1.57
CCDC39-203ENST00000473854 CEP135Q66GS9 1140 aa5.26□□□□□ -1.57
CCDC39-203ENST00000473854 FAM13BQ9NYF5 915 aa5.26□□□□□ -1.57
CCDC39-203ENST00000473854 KCNK4Q9NYG8 393 aa5.26□□□□□ -1.57
CCDC39-203ENST00000473854 PTPRAP18433 802 aa5.25□□□□□ -1.57
CCDC39-203ENST00000473854 PREPP48147 710 aa5.25□□□□□ -1.57
CCDC39-203ENST00000473854 TREML1Q86YW5 311 aa5.25□□□□□ -1.57
CCDC39-203ENST00000473854 OR13H1Q8NG92 308 aa5.25□□□□□ -1.57
CCDC39-203ENST00000473854 UCN2Q96RP3 112 aa5.25□□□□□ -1.57
CCDC39-203ENST00000473854 LACRTQ9GZZ8 138 aa5.25□□□□□ -1.57
CCDC39-203ENST00000473854 OSGEPQ9NPF4 335 aa5.25□□□□□ -1.57
CCDC39-203ENST00000473854 KCNMB2Q9Y691 235 aa5.25□□□□□ -1.57
CCDC39-203ENST00000473854 MAP4P27816 1152 aaKnown RBP5.24□□□□□ -1.57
CCDC39-203ENST00000473854 PIP4K2BP78356 416 aa5.24□□□□□ -1.57
CCDC39-203ENST00000473854 HDGFL1Q5TGJ6 251 aa5.24□□□□□ -1.57
CCDC39-203ENST00000473854 TXNDC11Q6PKC3 985 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms