RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 FOXN1O15353 648 aa15.34■□□□□ 0.05
SMPD4-217ENST00000473720 ECE2O60344 883 aa15.34■□□□□ 0.05
SMPD4-217ENST00000473720 UFL1O94874 794 aa15.34■□□□□ 0.05
SMPD4-217ENST00000473720 NEXNQ0ZGT2 675 aa15.34■□□□□ 0.05
SMPD4-217ENST00000473720 CCDC27Q2M243 656 aa15.34■□□□□ 0.05
SMPD4-217ENST00000473720 CWF19L2Q2TBE0 894 aaKnown RBP15.34■□□□□ 0.05
SMPD4-217ENST00000473720 G2E3Q7L622 706 aa15.34■□□□□ 0.05
SMPD4-217ENST00000473720 MICALL2Q8IY33 904 aa15.34■□□□□ 0.05
SMPD4-217ENST00000473720 TRPM4Q8TD43 1214 aa15.34■□□□□ 0.05
SMPD4-217ENST00000473720 AIDAQ96BJ3 306 aa15.34■□□□□ 0.05
SMPD4-217ENST00000473720 KCNQ5Q9NR82 932 aa15.34■□□□□ 0.05
SMPD4-217ENST00000473720 SLC4A2P04920 1241 aa15.33■□□□□ 0.04
SMPD4-217ENST00000473720 RBM26Q5T8P6 1007 aaKnown RBP15.33■□□□□ 0.04
SMPD4-217ENST00000473720 ANKRD18AQ8IVF6 992 aa15.33■□□□□ 0.04
SMPD4-217ENST00000473720 TBC1D16Q8TBP0 767 aa15.33■□□□□ 0.04
SMPD4-217ENST00000473720 GLIS2Q9BZE0 524 aaPredicted RBP15.33■□□□□ 0.04
SMPD4-217ENST00000473720 ZC3H12CQ9C0D7 883 aaKnown RBP15.33■□□□□ 0.04
SMPD4-217ENST00000473720 WDR33Q9C0J8 1336 aaKnown RBP15.33■□□□□ 0.04
SMPD4-217ENST00000473720 RASSF10A6NK89 507 aa15.32■□□□□ 0.04
SMPD4-217ENST00000473720 IGKV5-2P06315 115 aa15.32■□□□□ 0.04
SMPD4-217ENST00000473720 HIRAP54198 1017 aaPredicted RBP15.32■□□□□ 0.04
SMPD4-217ENST00000473720 CST9Q5W186 159 aa15.32■□□□□ 0.04
SMPD4-217ENST00000473720 SAMD7Q7Z3H4 446 aa15.32■□□□□ 0.04
SMPD4-217ENST00000473720 FAM9BQ8IZU0 186 aa15.32■□□□□ 0.04
SMPD4-217ENST00000473720 GGA1Q9UJY5 639 aa15.32■□□□□ 0.04
SMPD4-217ENST00000473720 CELF2O95319 508 aaKnown RBP15.31■□□□□ 0.04
SMPD4-217ENST00000473720 CTSWP56202 376 aa15.31■□□□□ 0.04
SMPD4-217ENST00000473720 TBC1D10BQ4KMP7 808 aaPredicted RBP15.31■□□□□ 0.04
SMPD4-217ENST00000473720 CYP4F22Q6NT55 531 aa15.31■□□□□ 0.04
SMPD4-217ENST00000473720 CDHR2Q9BYE9 1310 aa15.31■□□□□ 0.04
SMPD4-217ENST00000473720 FANCIQ9NVI1 1328 aa15.31■□□□□ 0.04
SMPD4-217ENST00000473720 A0A1B0GUL6 1792 aa15.31■□□□□ 0.04
SMPD4-217ENST00000473720 FKBP5Q13451 457 aaPredicted RBP15.3■□□□□ 0.04
SMPD4-217ENST00000473720 IL16Q14005 1332 aa15.3■□□□□ 0.04
SMPD4-217ENST00000473720 UBE3BQ7Z3V4 1068 aa15.3■□□□□ 0.04
SMPD4-217ENST00000473720 RTL9Q8NET4 1388 aa15.3■□□□□ 0.04
SMPD4-217ENST00000473720 CASP8AP2Q9UKL3 1982 aa15.29■□□□□ 0.04
SMPD4-217ENST00000473720 AKAP11Q9UKA4 1901 aa15.29■□□□□ 0.04
SMPD4-217ENST00000473720 ZNF646O15015 1829 aaPredicted RBP15.29■□□□□ 0.04
SMPD4-217ENST00000473720 NEURL1BA8MQ27 555 aa15.29■□□□□ 0.04
SMPD4-217ENST00000473720 EXOSC9Q06265 439 aaKnown RBP15.29■□□□□ 0.04
SMPD4-217ENST00000473720 FLIIQ13045 1269 aa15.29■□□□□ 0.04
SMPD4-217ENST00000473720 CAPNS2Q96L46 248 aa15.29■□□□□ 0.04
SMPD4-217ENST00000473720 CDC5LQ99459 802 aaKnown RBP15.29■□□□□ 0.04
SMPD4-217ENST00000473720 GREM2Q9H772 168 aa15.29■□□□□ 0.04
SMPD4-217ENST00000473720 PODXL2Q9NZ53 605 aa15.29■□□□□ 0.04
SMPD4-217ENST00000473720 THSD7BQ9C0I4 1608 aa15.28■□□□□ 0.04
SMPD4-217ENST00000473720 EGFRP00533 1210 aa15.28■□□□□ 0.04
SMPD4-217ENST00000473720 DLK2Q6UY11 383 aa15.28■□□□□ 0.04
SMPD4-217ENST00000473720 USP48Q86UV5 1035 aa15.28■□□□□ 0.04
SMPD4-217ENST00000473720 TTLL11Q8NHH1 800 aa15.28■□□□□ 0.04
SMPD4-217ENST00000473720 TLL2Q9Y6L7 1015 aa15.28■□□□□ 0.04
SMPD4-217ENST00000473720 XDHP47989 1333 aa15.27■□□□□ 0.04
SMPD4-217ENST00000473720 WTIPA6NIX2 430 aaPredicted RBP15.27■□□□□ 0.04
SMPD4-217ENST00000473720 ECE1P42892 770 aa15.27■□□□□ 0.04
SMPD4-217ENST00000473720 CTCFP49711 727 aaPredicted RBP15.27■□□□□ 0.04
SMPD4-217ENST00000473720 LBX1P52954 281 aa15.27■□□□□ 0.04
SMPD4-217ENST00000473720 CDC37L1Q7L3B6 337 aa15.27■□□□□ 0.04
SMPD4-217ENST00000473720 DPF2Q92785 391 aa15.27■□□□□ 0.04
SMPD4-217ENST00000473720 FBXW7Q969H0 707 aa15.27■□□□□ 0.04
SMPD4-217ENST00000473720 WBP1LQ9NX94 342 aa15.27■□□□□ 0.04
SMPD4-217ENST00000473720 AOC2O75106 756 aa15.26■□□□□ 0.03
SMPD4-217ENST00000473720 VAMP4O75379 141 aa15.26■□□□□ 0.03
SMPD4-217ENST00000473720 ATP2B4P23634 1241 aa15.26■□□□□ 0.03
SMPD4-217ENST00000473720 RPS12P25398 132 aaKnown RBP15.26■□□□□ 0.03
SMPD4-217ENST00000473720 MAP2K1Q02750 393 aaPredicted RBP15.26■□□□□ 0.03
SMPD4-217ENST00000473720 KIF4BQ2VIQ3 1234 aa15.26■□□□□ 0.03
SMPD4-217ENST00000473720 WDR63Q8IWG1 891 aa15.26■□□□□ 0.03
SMPD4-217ENST00000473720 ZC3H15Q8WU90 426 aaKnown RBP15.26■□□□□ 0.03
SMPD4-217ENST00000473720 DNAAF4Q8WXU2 420 aa15.26■□□□□ 0.03
SMPD4-217ENST00000473720 PGAP2Q9UHJ9 254 aa15.26■□□□□ 0.03
SMPD4-217ENST00000473720 H7C1W4 665 aa15.25■□□□□ 0.03
SMPD4-217ENST00000473720 VIL1P09327 827 aaKnown RBP15.25■□□□□ 0.03
SMPD4-217ENST00000473720 IGHMBP2P38935 993 aaKnown RBP15.25■□□□□ 0.03
SMPD4-217ENST00000473720 GCKRQ14397 625 aa15.25■□□□□ 0.03
SMPD4-217ENST00000473720 KRT26Q7Z3Y9 468 aa15.25■□□□□ 0.03
SMPD4-217ENST00000473720 DCPSQ96C86 337 aaKnown RBP15.25■□□□□ 0.03
SMPD4-217ENST00000473720 BEGAINQ9BUH8 593 aa15.25■□□□□ 0.03
SMPD4-217ENST00000473720 MYH16Q9H6N6 1097 aa15.25■□□□□ 0.03
SMPD4-217ENST00000473720 SPINK5Q9NQ38 1064 aaPredicted RBP15.25■□□□□ 0.03
SMPD4-217ENST00000473720 MINPP1Q9UNW1 487 aa15.25■□□□□ 0.03
SMPD4-217ENST00000473720 ADM5C9JUS6 153 aa15.24■□□□□ 0.03
SMPD4-217ENST00000473720 F6X3S4 739 aa15.24■□□□□ 0.03
SMPD4-217ENST00000473720 ITGA6P23229 1130 aa15.24■□□□□ 0.03
SMPD4-217ENST00000473720 FAM161AQ3B820 660 aa15.24■□□□□ 0.03
SMPD4-217ENST00000473720 SAPCD2Q86UD0 394 aa15.24■□□□□ 0.03
SMPD4-217ENST00000473720 BSDC1Q9NW68 430 aaPredicted RBP15.24■□□□□ 0.03
SMPD4-217ENST00000473720 CHMP3Q9Y3E7 222 aa15.24■□□□□ 0.03
SMPD4-217ENST00000473720 ASTN2O75129 1339 aaPredicted RBP15.23■□□□□ 0.03
SMPD4-217ENST00000473720 ECM29Q5VYK3 1845 aa15.23■□□□□ 0.03
SMPD4-217ENST00000473720 CCT4P50991 539 aaKnown RBP15.23■□□□□ 0.03
SMPD4-217ENST00000473720 RSBN1LQ6PCB5 846 aaPredicted RBP15.23■□□□□ 0.03
SMPD4-217ENST00000473720 MPHOSPH8Q99549 860 aa15.23■□□□□ 0.03
SMPD4-217ENST00000473720 GGA3Q9NZ52 723 aa15.23■□□□□ 0.03
SMPD4-217ENST00000473720 TSKSQ9UJT2 592 aa15.23■□□□□ 0.03
SMPD4-217ENST00000473720 HSPA8P11142 646 aaKnown RBP15.22■□□□□ 0.03
SMPD4-217ENST00000473720 NCBP3Q53F19 620 aaKnown RBP15.22■□□□□ 0.03
SMPD4-217ENST00000473720 LINS1Q8NG48 757 aa15.22■□□□□ 0.03
SMPD4-217ENST00000473720 PRDM10Q9NQV6 1147 aa15.22■□□□□ 0.03
SMPD4-217ENST00000473720 USP17L3A6NCW0 530 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms