RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 RNF186Q9NXI6 227 aa16.53■□□□□ 0.24
TRAF4-209ENST00000473421 TRPA1O75762 1119 aa16.52■□□□□ 0.24
TRAF4-209ENST00000473421 SOX10P56693 466 aa16.52■□□□□ 0.24
TRAF4-209ENST00000473421 ANKRD13DQ6ZTN6 518 aa16.52■□□□□ 0.24
TRAF4-209ENST00000473421 CSRNP1Q96S65 589 aa16.52■□□□□ 0.24
TRAF4-209ENST00000473421 PNNQ9H307 717 aaKnown RBP16.52■□□□□ 0.24
TRAF4-209ENST00000473421 ZNF157P51786 506 aaPredicted RBP16.51■□□□□ 0.23
TRAF4-209ENST00000473421 KIF4BQ2VIQ3 1234 aa16.51■□□□□ 0.23
TRAF4-209ENST00000473421 HDGFL1Q5TGJ6 251 aa16.51■□□□□ 0.23
TRAF4-209ENST00000473421 GGA3Q9NZ52 723 aa16.51■□□□□ 0.23
TRAF4-209ENST00000473421 IRS4O14654 1257 aaPredicted RBP16.5■□□□□ 0.23
TRAF4-209ENST00000473421 VIL1P09327 827 aaKnown RBP16.5■□□□□ 0.23
TRAF4-209ENST00000473421 RPS8P62241 208 aaKnown RBP16.5■□□□□ 0.23
TRAF4-209ENST00000473421 MOB2Q70IA6 237 aa16.5■□□□□ 0.23
TRAF4-209ENST00000473421 TMC4Q7Z404 712 aa16.5■□□□□ 0.23
TRAF4-209ENST00000473421 C2orf69Q8N8R5 385 aa16.5■□□□□ 0.23
TRAF4-209ENST00000473421 DCPSQ96C86 337 aaKnown RBP16.5■□□□□ 0.23
TRAF4-209ENST00000473421 SLC10A3P09131 477 aa16.49■□□□□ 0.23
TRAF4-209ENST00000473421 CDCA5Q96FF9 252 aa16.49■□□□□ 0.23
TRAF4-209ENST00000473421 RPS12P25398 132 aaKnown RBP16.48■□□□□ 0.23
TRAF4-209ENST00000473421 PRAMEF18Q5VWM3 479 aa16.48■□□□□ 0.23
TRAF4-209ENST00000473421 CCDC85AQ96PX6 553 aaPredicted RBP16.48■□□□□ 0.23
TRAF4-209ENST00000473421 PHAXQ9H814 394 aaKnown RBP16.48■□□□□ 0.23
TRAF4-209ENST00000473421 PDE4DIPQ5VU43 2346 aa16.47■□□□□ 0.23
TRAF4-209ENST00000473421 UFL1O94874 794 aa16.47■□□□□ 0.23
TRAF4-209ENST00000473421 SCARF1Q14162 830 aa16.47■□□□□ 0.23
TRAF4-209ENST00000473421 ANGEL2Q5VTE6 544 aaKnown RBP16.47■□□□□ 0.23
TRAF4-209ENST00000473421 DUSP27Q5VZP5 1158 aa16.47■□□□□ 0.23
TRAF4-209ENST00000473421 CCDC102AQ96A19 550 aa16.47■□□□□ 0.23
TRAF4-209ENST00000473421 GMLQ99445 158 aa16.47■□□□□ 0.23
TRAF4-209ENST00000473421 DBF4Q9UBU7 674 aaPredicted RBP16.47■□□□□ 0.23
TRAF4-209ENST00000473421 ZNF280AP59817 542 aaPredicted RBP16.46■□□□□ 0.23
TRAF4-209ENST00000473421 LMOD3Q0VAK6 560 aa16.46■□□□□ 0.23
TRAF4-209ENST00000473421 TRIM28Q13263 835 aaKnown RBP16.46■□□□□ 0.23
TRAF4-209ENST00000473421 RASAL3Q86YV0 1011 aa16.46■□□□□ 0.23
TRAF4-209ENST00000473421 MXD3Q9BW11 206 aa16.46■□□□□ 0.23
TRAF4-209ENST00000473421 ZC3H12CQ9C0D7 883 aaKnown RBP16.46■□□□□ 0.23
TRAF4-209ENST00000473421 SAGE1Q9NXZ1 904 aa16.46■□□□□ 0.23
TRAF4-209ENST00000473421 PODXL2Q9NZ53 605 aa16.46■□□□□ 0.23
TRAF4-209ENST00000473421 AKAP11Q9UKA4 1901 aa16.45■□□□□ 0.22
TRAF4-209ENST00000473421 SULF1Q8IWU6 871 aa16.45■□□□□ 0.22
TRAF4-209ENST00000473421 EYA3Q99504 573 aa16.45■□□□□ 0.22
TRAF4-209ENST00000473421 MBIPQ9NS73 344 aa16.45■□□□□ 0.22
TRAF4-209ENST00000473421 ELL2O00472 640 aaPredicted RBP16.44■□□□□ 0.22
TRAF4-209ENST00000473421 RSBN1LQ6PCB5 846 aaPredicted RBP16.44■□□□□ 0.22
TRAF4-209ENST00000473421 ZBTB38Q8NAP3 1195 aaPredicted RBP16.44■□□□□ 0.22
TRAF4-209ENST00000473421 MYD88Q99836 296 aa16.44■□□□□ 0.22
TRAF4-209ENST00000473421 ANKIB1Q9P2G1 1089 aa16.44■□□□□ 0.22
TRAF4-209ENST00000473421 ADAMTS8Q9UP79 889 aa16.44■□□□□ 0.22
TRAF4-209ENST00000473421 UBE2Q2LH0YL09 131 aa16.43■□□□□ 0.22
TRAF4-209ENST00000473421 HYPKQ9NX55 129 aa16.43■□□□□ 0.22
TRAF4-209ENST00000473421 TBC1D8O95759 1140 aa16.42■□□□□ 0.22
TRAF4-209ENST00000473421 HOXB7P09629 217 aa16.42■□□□□ 0.22
TRAF4-209ENST00000473421 NBPF9Q3BBW0 867 aa16.42■□□□□ 0.22
TRAF4-209ENST00000473421 RIC3Q7Z5B4 369 aa16.42■□□□□ 0.22
TRAF4-209ENST00000473421 RUNDC1Q96C34 613 aa16.42■□□□□ 0.22
TRAF4-209ENST00000473421 GGA1Q9UJY5 639 aa16.42■□□□□ 0.22
TRAF4-209ENST00000473421 PSME4Q14997 1843 aa16.42■□□□□ 0.22
TRAF4-209ENST00000473421 ZNF853P0CG23 659 aa16.41■□□□□ 0.22
TRAF4-209ENST00000473421 RALBP1Q15311 655 aa16.41■□□□□ 0.22
TRAF4-209ENST00000473421 CTU1Q7Z7A3 348 aaKnown RBP16.41■□□□□ 0.22
TRAF4-209ENST00000473421 AGBL3Q8NEM8 1001 aa16.41■□□□□ 0.22
TRAF4-209ENST00000473421 R3HDMLQ9H3Y0 253 aa16.41■□□□□ 0.22
TRAF4-209ENST00000473421 MYOZ2Q9NPC6 264 aa16.41■□□□□ 0.22
TRAF4-209ENST00000473421 ZNF646O15015 1829 aaPredicted RBP16.4■□□□□ 0.22
TRAF4-209ENST00000473421 USP17L8P0C7I0 530 aa16.4■□□□□ 0.22
TRAF4-209ENST00000473421 C8orf58Q8NAV2 365 aa16.4■□□□□ 0.22
TRAF4-209ENST00000473421 HPS5Q9UPZ3 1129 aa16.4■□□□□ 0.22
TRAF4-209ENST00000473421 ZNF609O15014 1411 aa16.39■□□□□ 0.21
TRAF4-209ENST00000473421 G3V3G9 751 aa16.39■□□□□ 0.21
TRAF4-209ENST00000473421 PCCAP05165 728 aaPredicted RBP16.39■□□□□ 0.21
TRAF4-209ENST00000473421 MKRN3Q13064 507 aaKnown RBP16.39■□□□□ 0.21
TRAF4-209ENST00000473421 DCAF8Q5TAQ9 597 aa16.39■□□□□ 0.21
TRAF4-209ENST00000473421 TXNRD3Q86VQ6 643 aa16.39■□□□□ 0.21
TRAF4-209ENST00000473421 ZNF296Q8WUU4 475 aaPredicted RBP16.39■□□□□ 0.21
TRAF4-209ENST00000473421 PAPPA2Q9BXP8 1791 aa16.38■□□□□ 0.21
TRAF4-209ENST00000473421 PDE8AO60658 829 aa16.38■□□□□ 0.21
TRAF4-209ENST00000473421 FZD1Q9UP38 647 aa16.38■□□□□ 0.21
TRAF4-209ENST00000473421 USP17L3A6NCW0 530 aa16.37■□□□□ 0.21
TRAF4-209ENST00000473421 USP17L4A6NCW7 530 aa16.37■□□□□ 0.21
TRAF4-209ENST00000473421 KLRK1P26718 216 aa16.37■□□□□ 0.21
TRAF4-209ENST00000473421 GOLGA2Q08379 1002 aa16.37■□□□□ 0.21
TRAF4-209ENST00000473421 DDX10Q13206 875 aaKnown RBP16.37■□□□□ 0.21
TRAF4-209ENST00000473421 CCDC152Q4G0S7 254 aa16.37■□□□□ 0.21
TRAF4-209ENST00000473421 DACT2Q5SW24 774 aa16.37■□□□□ 0.21
TRAF4-209ENST00000473421 USP17L1Q7RTZ2 530 aa16.37■□□□□ 0.21
TRAF4-209ENST00000473421 XDHP47989 1333 aa16.37■□□□□ 0.21
TRAF4-209ENST00000473421 MYBBP1AQ9BQG0 1328 aaKnown RBP16.37■□□□□ 0.21
TRAF4-209ENST00000473421 MKI67P46013 3256 aaKnown RBP16.36■□□□□ 0.21
TRAF4-209ENST00000473421 SPEF2Q9C093 1822 aa16.36■□□□□ 0.21
TRAF4-209ENST00000473421 IGKV5-2P06315 115 aa16.36■□□□□ 0.21
TRAF4-209ENST00000473421 ANKRD18AQ8IVF6 992 aa16.36■□□□□ 0.21
TRAF4-209ENST00000473421 TSPYL6Q8N831 410 aa16.36■□□□□ 0.21
TRAF4-209ENST00000473421 CCDC191Q8NCU4 936 aa16.36■□□□□ 0.21
TRAF4-209ENST00000473421 METTL22Q9BUU2 404 aaPredicted RBP16.36■□□□□ 0.21
TRAF4-209ENST00000473421 GREM2Q9H772 168 aa16.36■□□□□ 0.21
TRAF4-209ENST00000473421 CWC25Q9NXE8 425 aaPredicted RBP16.36■□□□□ 0.21
TRAF4-209ENST00000473421 MINPP1Q9UNW1 487 aa16.36■□□□□ 0.21
TRAF4-209ENST00000473421 HTTP42858 3142 aa16.35■□□□□ 0.21
TRAF4-209ENST00000473421 WNT10BO00744 389 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms