RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 LMBR1LQ6UX01 489 aa16.56■□□□□ 0.24
TPM3-216ENST00000473036 RTKN2Q8IZC4 609 aa16.56■□□□□ 0.24
TPM3-216ENST00000473036 CLUAP1Q96AJ1 413 aa16.56■□□□□ 0.24
TPM3-216ENST00000473036 AIDAQ96BJ3 306 aa16.56■□□□□ 0.24
TPM3-216ENST00000473036 PSMD1Q99460 953 aa16.56■□□□□ 0.24
TPM3-216ENST00000473036 ITGA6P23229 1130 aa16.55■□□□□ 0.24
TPM3-216ENST00000473036 CTCFP49711 727 aaPredicted RBP16.55■□□□□ 0.24
TPM3-216ENST00000473036 GPSM2P81274 684 aa16.55■□□□□ 0.24
TPM3-216ENST00000473036 ZKSCAN2Q63HK3 967 aa16.55■□□□□ 0.24
TPM3-216ENST00000473036 CC2D2BQ6DHV5 1058 aa16.55■□□□□ 0.24
TPM3-216ENST00000473036 TMEM57Q8N5G2 664 aa16.55■□□□□ 0.24
TPM3-216ENST00000473036 MEIS3Q99687 375 aa16.55■□□□□ 0.24
TPM3-216ENST00000473036 TAF1DQ9H5J8 278 aaPredicted RBP16.55■□□□□ 0.24
TPM3-216ENST00000473036 BICC1Q9H694 974 aaKnown RBP16.55■□□□□ 0.24
TPM3-216ENST00000473036 MKRN1Q9UHC7 482 aaKnown RBP16.55■□□□□ 0.24
TPM3-216ENST00000473036 A0A1B0GUL6 1792 aa16.54■□□□□ 0.24
TPM3-216ENST00000473036 TMEM88BA6NKF7 163 aa16.54■□□□□ 0.24
TPM3-216ENST00000473036 RABL6Q3YEC7 729 aaPredicted RBP16.54■□□□□ 0.24
TPM3-216ENST00000473036 PNMA8AQ86V59 439 aaPredicted RBP16.54■□□□□ 0.24
TPM3-216ENST00000473036 ZNF594Q96JF6 807 aaPredicted RBP16.54■□□□□ 0.24
TPM3-216ENST00000473036 RTFDC1Q9BY42 306 aaPredicted RBP16.54■□□□□ 0.24
TPM3-216ENST00000473036 IPO8O15397 1037 aaKnown RBP16.53■□□□□ 0.24
TPM3-216ENST00000473036 GPR101Q96P66 508 aaPredicted RBP16.53■□□□□ 0.24
TPM3-216ENST00000473036 POLLQ9UGP5 575 aa16.53■□□□□ 0.24
TPM3-216ENST00000473036 RCAN3Q9UKA8 241 aa16.53■□□□□ 0.24
TPM3-216ENST00000473036 FOXN1O15353 648 aa16.52■□□□□ 0.24
TPM3-216ENST00000473036 PLIN1O60240 522 aa16.52■□□□□ 0.24
TPM3-216ENST00000473036 IARSP41252 1262 aaKnown RBP16.52■□□□□ 0.24
TPM3-216ENST00000473036 TMC4Q7Z404 712 aa16.52■□□□□ 0.24
TPM3-216ENST00000473036 ANKRD18AQ8IVF6 992 aa16.52■□□□□ 0.24
TPM3-216ENST00000473036 MPNDQ8N594 471 aa16.52■□□□□ 0.24
TPM3-216ENST00000473036 MINPP1Q9UNW1 487 aa16.52■□□□□ 0.24
TPM3-216ENST00000473036 ITGBL1O95965 494 aaPredicted RBP16.51■□□□□ 0.23
TPM3-216ENST00000473036 POTEIP0CG38 1075 aa16.51■□□□□ 0.23
TPM3-216ENST00000473036 POTEJP0CG39 1038 aa16.51■□□□□ 0.23
TPM3-216ENST00000473036 DPP8Q6V1X1 898 aaPredicted RBP16.51■□□□□ 0.23
TPM3-216ENST00000473036 PANK1Q8TE04 598 aa16.51■□□□□ 0.23
TPM3-216ENST00000473036 CDC5LQ99459 802 aaKnown RBP16.51■□□□□ 0.23
TPM3-216ENST00000473036 BSDC1Q9NW68 430 aaPredicted RBP16.51■□□□□ 0.23
TPM3-216ENST00000473036 HACL1Q9UJ83 578 aa16.51■□□□□ 0.23
TPM3-216ENST00000473036 CHMP3Q9Y3E7 222 aa16.51■□□□□ 0.23
TPM3-216ENST00000473036 RASSF10A6NK89 507 aa16.5■□□□□ 0.23
TPM3-216ENST00000473036 AOC3Q16853 763 aa16.5■□□□□ 0.23
TPM3-216ENST00000473036 GRIPAP1Q4V328 841 aa16.5■□□□□ 0.23
TPM3-216ENST00000473036 TBC1D16Q8TBP0 767 aa16.5■□□□□ 0.23
TPM3-216ENST00000473036 WBP1LQ9NX94 342 aa16.5■□□□□ 0.23
TPM3-216ENST00000473036 PODXL2Q9NZ53 605 aa16.5■□□□□ 0.23
TPM3-216ENST00000473036 NSFL1CQ9UNZ2 370 aaKnown RBP16.5■□□□□ 0.23
TPM3-216ENST00000473036 LRRFIP2Q9Y608 721 aaKnown RBP16.5■□□□□ 0.23
TPM3-216ENST00000473036 ANKRD18BA2A2Z9 1011 aa16.49■□□□□ 0.23
TPM3-216ENST00000473036 SNAP23O00161 211 aa16.49■□□□□ 0.23
TPM3-216ENST00000473036 RFX5P48382 616 aaPredicted RBP16.49■□□□□ 0.23
TPM3-216ENST00000473036 VEGFBP49765 207 aa16.49■□□□□ 0.23
TPM3-216ENST00000473036 MAP2K1Q02750 393 aaPredicted RBP16.49■□□□□ 0.23
TPM3-216ENST00000473036 IFIT5Q13325 482 aaKnown RBP16.49■□□□□ 0.23
TPM3-216ENST00000473036 DZIP1LQ8IYY4 767 aaKnown RBP16.49■□□□□ 0.23
TPM3-216ENST00000473036 KLHDC4Q8TBB5 520 aa16.49■□□□□ 0.23
TPM3-216ENST00000473036 PUS3Q9BZE2 481 aaKnown RBP16.49■□□□□ 0.23
TPM3-216ENST00000473036 ADAMTSL1Q8N6G6 1762 aa16.49■□□□□ 0.23
TPM3-216ENST00000473036 ZNF541Q9H0D2 1346 aa16.48■□□□□ 0.23
TPM3-216ENST00000473036 FZD9O00144 591 aa16.48■□□□□ 0.23
TPM3-216ENST00000473036 EPHX2P34913 555 aa16.48■□□□□ 0.23
TPM3-216ENST00000473036 C20orf194Q5TEA3 1177 aa16.48■□□□□ 0.23
TPM3-216ENST00000473036 GPC2Q8N158 579 aa16.48■□□□□ 0.23
TPM3-216ENST00000473036 SCN9AQ15858 1988 aa16.47■□□□□ 0.23
TPM3-216ENST00000473036 PPIP5K2O43314 1243 aa16.47■□□□□ 0.23
TPM3-216ENST00000473036 CENPBP07199 599 aaPredicted RBP16.47■□□□□ 0.23
TPM3-216ENST00000473036 UBTFL1P0CB47 393 aaPredicted RBP16.47■□□□□ 0.23
TPM3-216ENST00000473036 IGHMBP2P38935 993 aaKnown RBP16.47■□□□□ 0.23
TPM3-216ENST00000473036 KIAA2012Q0VF49 1180 aa16.47■□□□□ 0.23
TPM3-216ENST00000473036 YDJCA8MPS7 323 aa16.46■□□□□ 0.23
TPM3-216ENST00000473036 ZBTB7BO15156 539 aaPredicted RBP16.46■□□□□ 0.23
TPM3-216ENST00000473036 CHRNDQ07001 517 aa16.46■□□□□ 0.23
TPM3-216ENST00000473036 CCDC57Q2TAC2 916 aa16.46■□□□□ 0.23
TPM3-216ENST00000473036 DEFB115Q30KQ5 88 aa16.46■□□□□ 0.23
TPM3-216ENST00000473036 LRRC24Q50LG9 513 aa16.46■□□□□ 0.23
TPM3-216ENST00000473036 LARGE2Q8N3Y3 721 aa16.46■□□□□ 0.23
TPM3-216ENST00000473036 HELBQ8NG08 1087 aaPredicted RBP16.46■□□□□ 0.23
TPM3-216ENST00000473036 XDHP47989 1333 aa16.45■□□□□ 0.22
TPM3-216ENST00000473036 IRS2Q9Y4H2 1338 aa16.45■□□□□ 0.22
TPM3-216ENST00000473036 C6orf229H3BNL8 230 aa16.45■□□□□ 0.22
TPM3-216ENST00000473036 RIMBP2O15034 1052 aa16.45■□□□□ 0.22
TPM3-216ENST00000473036 TAF5LO75529 589 aa16.45■□□□□ 0.22
TPM3-216ENST00000473036 UFL1O94874 794 aa16.45■□□□□ 0.22
TPM3-216ENST00000473036 KLRK1P26718 216 aa16.45■□□□□ 0.22
TPM3-216ENST00000473036 PTPN12Q05209 780 aaKnown RBP16.45■□□□□ 0.22
TPM3-216ENST00000473036 EAPPQ56P03 285 aaPredicted RBP16.45■□□□□ 0.22
TPM3-216ENST00000473036 TXNRD3Q86VQ6 643 aa16.45■□□□□ 0.22
TPM3-216ENST00000473036 CNTROBQ8N137 903 aa16.45■□□□□ 0.22
TPM3-216ENST00000473036 JDP2Q8WYK2 163 aa16.45■□□□□ 0.22
TPM3-216ENST00000473036 TMX4Q9H1E5 349 aaPredicted RBP16.45■□□□□ 0.22
TPM3-216ENST00000473036 KCNQ5Q9NR82 932 aa16.45■□□□□ 0.22
TPM3-216ENST00000473036 ANKIB1Q9P2G1 1089 aa16.45■□□□□ 0.22
TPM3-216ENST00000473036 CLEC11AQ9Y240 323 aa16.45■□□□□ 0.22
TPM3-216ENST00000473036 RIPOR2Q9Y4F9 1068 aa16.45■□□□□ 0.22
TPM3-216ENST00000473036 FTSJ3Q8IY81 847 aaKnown RBP16.44■□□□□ 0.22
TPM3-216ENST00000473036 SUPT20HQ8NEM7 779 aa16.44■□□□□ 0.22
TPM3-216ENST00000473036 MPHOSPH8Q99549 860 aa16.44■□□□□ 0.22
TPM3-216ENST00000473036 VPS33BQ9H267 617 aa16.44■□□□□ 0.22
TPM3-216ENST00000473036 C1orf115Q9H7X2 142 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms