RNA–Protein interactions for RNA: ENST00000472962.1

CCDC142-205, Transcript of coiled-coil domain containing 142, humanhuman

TSL 3

Gene CCDC142, Length 645 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-205ENST00000472962 PLBD2Q8NHP8 589 aa20.31■□□□□ 0.84
CCDC142-205ENST00000472962 KCNQ5Q9NR82 932 aa20.31■□□□□ 0.84
CCDC142-205ENST00000472962 POLLQ9UGP5 575 aa20.31■□□□□ 0.84
CCDC142-205ENST00000472962 PDE4DIPQ5VU43 2346 aa20.31■□□□□ 0.84
CCDC142-205ENST00000472962 SAGE1Q9NXZ1 904 aa20.3■□□□□ 0.84
CCDC142-205ENST00000472962 GGA3Q9NZ52 723 aa20.3■□□□□ 0.84
CCDC142-205ENST00000472962 ANKIB1Q9P2G1 1089 aa20.3■□□□□ 0.84
CCDC142-205ENST00000472962 FAM155AB1AL88 458 aaPredicted RBP20.29■□□□□ 0.84
CCDC142-205ENST00000472962 IRS4O14654 1257 aaPredicted RBP20.29■□□□□ 0.84
CCDC142-205ENST00000472962 SF3B3Q15393 1217 aaKnown RBP20.29■□□□□ 0.84
CCDC142-205ENST00000472962 CCDC146Q8IYE0 955 aa20.29■□□□□ 0.84
CCDC142-205ENST00000472962 RNF186Q9NXI6 227 aa20.29■□□□□ 0.84
CCDC142-205ENST00000472962 RPS8P62241 208 aaKnown RBP20.28■□□□□ 0.84
CCDC142-205ENST00000472962 TBC1D16Q8TBP0 767 aa20.28■□□□□ 0.84
CCDC142-205ENST00000472962 SCN9AQ15858 1988 aa20.28■□□□□ 0.84
CCDC142-205ENST00000472962 UFL1O94874 794 aa20.27■□□□□ 0.84
CCDC142-205ENST00000472962 DBF4Q9UBU7 674 aaPredicted RBP20.27■□□□□ 0.84
CCDC142-205ENST00000472962 RTL9Q8NET4 1388 aa20.26■□□□□ 0.83
CCDC142-205ENST00000472962 RIC3Q7Z5B4 369 aa20.26■□□□□ 0.83
CCDC142-205ENST00000472962 CDCA5Q96FF9 252 aa20.26■□□□□ 0.83
CCDC142-205ENST00000472962 ISCA1Q9BUE6 129 aa20.26■□□□□ 0.83
CCDC142-205ENST00000472962 SLC10A3P09131 477 aa20.25■□□□□ 0.83
CCDC142-205ENST00000472962 HSP90B1P14625 803 aaKnown RBP20.25■□□□□ 0.83
CCDC142-205ENST00000472962 HYPKQ9NX55 129 aa20.25■□□□□ 0.83
CCDC142-205ENST00000472962 GGA1Q9UJY5 639 aa20.25■□□□□ 0.83
CCDC142-205ENST00000472962 CHL1O00533 1208 aa20.24■□□□□ 0.83
CCDC142-205ENST00000472962 SCARF1Q14162 830 aa20.24■□□□□ 0.83
CCDC142-205ENST00000472962 ANGEL2Q5VTE6 544 aaKnown RBP20.24■□□□□ 0.83
CCDC142-205ENST00000472962 CSRNP1Q96S65 589 aa20.24■□□□□ 0.83
CCDC142-205ENST00000472962 PCDH10Q9P2E7 1040 aa20.24■□□□□ 0.83
CCDC142-205ENST00000472962 HDAC9Q9UKV0 1011 aa20.24■□□□□ 0.83
CCDC142-205ENST00000472962 TNRC18O15417 2968 aaPredicted RBP20.24■□□□□ 0.83
CCDC142-205ENST00000472962 ASTN2O75129 1339 aaPredicted RBP20.24■□□□□ 0.83
CCDC142-205ENST00000472962 VIL1P09327 827 aaKnown RBP20.23■□□□□ 0.83
CCDC142-205ENST00000472962 GOLGA2Q08379 1002 aa20.23■□□□□ 0.83
CCDC142-205ENST00000472962 TTLL12Q14166 644 aaPredicted RBP20.23■□□□□ 0.83
CCDC142-205ENST00000472962 CTU1Q7Z7A3 348 aaKnown RBP20.23■□□□□ 0.83
CCDC142-205ENST00000472962 CCDC85AQ96PX6 553 aaPredicted RBP20.23■□□□□ 0.83
CCDC142-205ENST00000472962 COL4A1P02462 1669 aa20.22■□□□□ 0.83
CCDC142-205ENST00000472962 WDR43Q15061 677 aaKnown RBP eCLIP20.22■□□□□ 0.83
CCDC142-205ENST00000472962 REM2Q8IYK8 340 aaPredicted RBP20.22■□□□□ 0.83
CCDC142-205ENST00000472962 SEC31BQ9NQW1 1179 aa20.22■□□□□ 0.83
CCDC142-205ENST00000472962 RALBP1Q15311 655 aa20.21■□□□□ 0.83
CCDC142-205ENST00000472962 CCDC152Q4G0S7 254 aa20.21■□□□□ 0.83
CCDC142-205ENST00000472962 DUSP27Q5VZP5 1158 aa20.21■□□□□ 0.83
CCDC142-205ENST00000472962 RSBN1LQ6PCB5 846 aaPredicted RBP20.21■□□□□ 0.83
CCDC142-205ENST00000472962 PSME4Q14997 1843 aa20.2■□□□□ 0.82
CCDC142-205ENST00000472962 HOXB7P09629 217 aa20.2■□□□□ 0.82
CCDC142-205ENST00000472962 RASAL3Q86YV0 1011 aa20.2■□□□□ 0.82
CCDC142-205ENST00000472962 ZBTB38Q8NAP3 1195 aaPredicted RBP20.2■□□□□ 0.82
CCDC142-205ENST00000472962 AGBL3Q8NEM8 1001 aa20.2■□□□□ 0.82
CCDC142-205ENST00000472962 FBXW7Q969H0 707 aa20.2■□□□□ 0.82
CCDC142-205ENST00000472962 MYD88Q99836 296 aa20.2■□□□□ 0.82
CCDC142-205ENST00000472962 USP17L8P0C7I0 530 aa20.19■□□□□ 0.82
CCDC142-205ENST00000472962 RUNDC1Q96C34 613 aa20.19■□□□□ 0.82
CCDC142-205ENST00000472962 MYOZ2Q9NPC6 264 aa20.19■□□□□ 0.82
CCDC142-205ENST00000472962 PODXL2Q9NZ53 605 aa20.19■□□□□ 0.82
CCDC142-205ENST00000472962 SCAF8Q9UPN6 1271 aaKnown RBP20.19■□□□□ 0.82
CCDC142-205ENST00000472962 PAPPA2Q9BXP8 1791 aa20.18■□□□□ 0.82
CCDC142-205ENST00000472962 SPEF2Q9C093 1822 aa20.18■□□□□ 0.82
CCDC142-205ENST00000472962 ANKRD18AQ8IVF6 992 aa20.18■□□□□ 0.82
CCDC142-205ENST00000472962 JARID2Q92833 1246 aaPredicted RBP20.18■□□□□ 0.82
CCDC142-205ENST00000472962 TRIM35Q9UPQ4 493 aa20.18■□□□□ 0.82
CCDC142-205ENST00000472962 ZNF280AP59817 542 aaPredicted RBP20.17■□□□□ 0.82
CCDC142-205ENST00000472962 FKBP1BP68106 108 aa20.17■□□□□ 0.82
CCDC142-205ENST00000472962 TRIM28Q13263 835 aaKnown RBP20.17■□□□□ 0.82
CCDC142-205ENST00000472962 USP17L3A6NCW0 530 aa20.16■□□□□ 0.82
CCDC142-205ENST00000472962 USP17L4A6NCW7 530 aa20.16■□□□□ 0.82
CCDC142-205ENST00000472962 UBE2Q2LH0YL09 131 aa20.16■□□□□ 0.82
CCDC142-205ENST00000472962 ELL2O00472 640 aaPredicted RBP20.16■□□□□ 0.82
CCDC142-205ENST00000472962 PDE8AO60658 829 aa20.16■□□□□ 0.82
CCDC142-205ENST00000472962 TBC1D8O95759 1140 aa20.16■□□□□ 0.82
CCDC142-205ENST00000472962 NF2P35240 595 aa20.16■□□□□ 0.82
CCDC142-205ENST00000472962 MOB2Q70IA6 237 aa20.16■□□□□ 0.82
CCDC142-205ENST00000472962 USP17L1Q7RTZ2 530 aa20.16■□□□□ 0.82
CCDC142-205ENST00000472962 XDHP47989 1333 aa20.16■□□□□ 0.82
CCDC142-205ENST00000472962 MKRN3Q13064 507 aaKnown RBP20.15■□□□□ 0.82
CCDC142-205ENST00000472962 PRAMEF18Q5VWM3 479 aa20.15■□□□□ 0.82
CCDC142-205ENST00000472962 OGFOD1Q8N543 542 aa20.15■□□□□ 0.82
CCDC142-205ENST00000472962 PHAXQ9H814 394 aaKnown RBP20.15■□□□□ 0.82
CCDC142-205ENST00000472962 CWC25Q9NXE8 425 aaPredicted RBP20.15■□□□□ 0.82
CCDC142-205ENST00000472962 HPS5Q9UPZ3 1129 aa20.15■□□□□ 0.82
CCDC142-205ENST00000472962 PITPNM2Q9BZ72 1349 aa20.14■□□□□ 0.81
CCDC142-205ENST00000472962 ATP2B4P23634 1241 aa20.14■□□□□ 0.81
CCDC142-205ENST00000472962 PKN2Q16513 984 aaKnown RBP20.14■□□□□ 0.81
CCDC142-205ENST00000472962 PODNQ7Z5L7 613 aa20.14■□□□□ 0.81
CCDC142-205ENST00000472962 CCDC191Q8NCU4 936 aa20.14■□□□□ 0.81
CCDC142-205ENST00000472962 MBIPQ9NS73 344 aa20.14■□□□□ 0.81
CCDC142-205ENST00000472962 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.14■□□□□ 0.81
CCDC142-205ENST00000472962 MYH3P11055 1940 aa20.14■□□□□ 0.81
CCDC142-205ENST00000472962 DDX58O95786 925 aaKnown RBP20.13■□□□□ 0.81
CCDC142-205ENST00000472962 PRPF38BQ5VTL8 546 aaKnown RBP20.13■□□□□ 0.81
CCDC142-205ENST00000472962 ZNF296Q8WUU4 475 aaPredicted RBP20.13■□□□□ 0.81
CCDC142-205ENST00000472962 CDC5LQ99459 802 aaKnown RBP20.13■□□□□ 0.81
CCDC142-205ENST00000472962 MYBBP1AQ9BQG0 1328 aaKnown RBP20.12■□□□□ 0.81
CCDC142-205ENST00000472962 PCCAP05165 728 aaPredicted RBP20.12■□□□□ 0.81
CCDC142-205ENST00000472962 NBPF9Q3BBW0 867 aa20.12■□□□□ 0.81
CCDC142-205ENST00000472962 PRKG1Q13976 671 aa20.11■□□□□ 0.81
CCDC142-205ENST00000472962 ADAMTS8Q9UP79 889 aa20.1■□□□□ 0.81
CCDC142-205ENST00000472962 SREBF2Q12772 1141 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms