RNA–Protein interactions for RNA: ENST00000472756.1

VPS45-206, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 352 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-206ENST00000472756 ASIC4Q96FT7 647 aa4.79□□□□□ -1.64
VPS45-206ENST00000472756 ARSDP51689 593 aa4.78□□□□□ -1.64
VPS45-206ENST00000472756 GDF6Q6KF10 455 aaPredicted RBP4.78□□□□□ -1.64
VPS45-206ENST00000472756 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.78□□□□□ -1.64
VPS45-206ENST00000472756 OGFOD1Q8N543 542 aa4.78□□□□□ -1.64
VPS45-206ENST00000472756 SCG3Q8WXD2 468 aaKnown RBP4.78□□□□□ -1.64
VPS45-206ENST00000472756 COL26A1Q96A83 441 aa4.78□□□□□ -1.64
VPS45-206ENST00000472756 CCDC39Q9UFE4 941 aa4.78□□□□□ -1.64
VPS45-206ENST00000472756 TRIM33Q9UPN9 1127 aa4.78□□□□□ -1.64
VPS45-206ENST00000472756 PPME1Q9Y570 386 aa4.78□□□□□ -1.64
VPS45-206ENST00000472756 USP17L3A6NCW0 530 aa4.77□□□□□ -1.65
VPS45-206ENST00000472756 USP17L4A6NCW7 530 aa4.77□□□□□ -1.65
VPS45-206ENST00000472756 CD68P34810 354 aaPredicted RBP4.77□□□□□ -1.65
VPS45-206ENST00000472756 NEUROD2Q15784 382 aa4.77□□□□□ -1.65
VPS45-206ENST00000472756 USP17L2Q6R6M4 530 aa4.77□□□□□ -1.65
VPS45-206ENST00000472756 ADAMTSL4Q6UY14 1074 aa4.77□□□□□ -1.65
VPS45-206ENST00000472756 USP17L1Q7RTZ2 530 aa4.77□□□□□ -1.65
VPS45-206ENST00000472756 PIM2Q9P1W9 311 aa4.77□□□□□ -1.65
VPS45-206ENST00000472756 MMP20O60882 483 aa4.76□□□□□ -1.65
VPS45-206ENST00000472756 MICAL2O94851 1124 aa4.76□□□□□ -1.65
VPS45-206ENST00000472756 ARID4AP29374 1257 aaPredicted RBP4.76□□□□□ -1.65
VPS45-206ENST00000472756 ADAMTS19Q8TE59 1207 aa4.76□□□□□ -1.65
VPS45-206ENST00000472756 FOXD4L4Q8WXT5 416 aaPredicted RBP4.76□□□□□ -1.65
VPS45-206ENST00000472756 MYO19Q96H55 970 aa4.76□□□□□ -1.65
VPS45-206ENST00000472756 NGLY1Q96IV0 654 aa4.76□□□□□ -1.65
VPS45-206ENST00000472756 UCN2Q96RP3 112 aa4.76□□□□□ -1.65
VPS45-206ENST00000472756 KLK14Q9P0G3 267 aa4.76□□□□□ -1.65
VPS45-206ENST00000472756 RTCBQ9Y3I0 505 aaKnown RBP4.76□□□□□ -1.65
VPS45-206ENST00000472756 KCNMB2Q9Y691 235 aa4.76□□□□□ -1.65
VPS45-206ENST00000472756 ADAM11O75078 769 aa4.75□□□□□ -1.65
VPS45-206ENST00000472756 FOSL1P15407 271 aa4.75□□□□□ -1.65
VPS45-206ENST00000472756 IGFBP4P22692 258 aa4.75□□□□□ -1.65
VPS45-206ENST00000472756 BEND4Q6ZU67 534 aa4.75□□□□□ -1.65
VPS45-206ENST00000472756 ACAD11Q709F0 780 aa4.75□□□□□ -1.65
VPS45-206ENST00000472756 FBXL18Q96ME1 805 aa4.75□□□□□ -1.65
VPS45-206ENST00000472756 QTRT2Q9H974 415 aaKnown RBP4.75□□□□□ -1.65
VPS45-206ENST00000472756 DBX1A6NMT0 343 aa4.74□□□□□ -1.65
VPS45-206ENST00000472756 WDR64B1ANS9 1081 aa4.74□□□□□ -1.65
VPS45-206ENST00000472756 LINC01387J3KSC0 135 aa4.74□□□□□ -1.65
VPS45-206ENST00000472756 PAPLNO95428 1278 aa4.74□□□□□ -1.65
VPS45-206ENST00000472756 PREPP48147 710 aa4.74□□□□□ -1.65
VPS45-206ENST00000472756 CPSF6Q16630 551 aaKnown RBP eCLIP4.74□□□□□ -1.65
VPS45-206ENST00000472756 KRTAP5-3Q6L8H2 238 aa4.74□□□□□ -1.65
VPS45-206ENST00000472756 KRTAP9-3Q9BYQ3 159 aa4.74□□□□□ -1.65
VPS45-206ENST00000472756 MKRN1Q9UHC7 482 aaKnown RBP4.74□□□□□ -1.65
VPS45-206ENST00000472756 HIF3AQ9Y2N7 669 aa4.74□□□□□ -1.65
VPS45-206ENST00000472756 COG6Q9Y2V7 657 aa4.74□□□□□ -1.65
VPS45-206ENST00000472756 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.74□□□□□ -1.65
VPS45-206ENST00000472756 XYLBO75191 536 aa4.73□□□□□ -1.65
VPS45-206ENST00000472756 GHRHP01286 108 aa4.73□□□□□ -1.65
VPS45-206ENST00000472756 F13BP05160 661 aa4.73□□□□□ -1.65
VPS45-206ENST00000472756 PSAPP07602 524 aa4.73□□□□□ -1.65
VPS45-206ENST00000472756 BMP3P12645 472 aa4.73□□□□□ -1.65
VPS45-206ENST00000472756 VSIG10LQ86VR7 867 aa4.73□□□□□ -1.65
VPS45-206ENST00000472756 CILP2Q8IUL8 1156 aa4.73□□□□□ -1.65
VPS45-206ENST00000472756 KLHL23Q8NBE8 558 aa4.73□□□□□ -1.65
VPS45-206ENST00000472756 NSUN5Q96P11 429 aaKnown RBP4.73□□□□□ -1.65
VPS45-206ENST00000472756 FSCN2O14926 492 aa4.72□□□□□ -1.65
VPS45-206ENST00000472756 DGKZQ13574 1117 aa4.72□□□□□ -1.65
VPS45-206ENST00000472756 MCM6Q14566 821 aa4.72□□□□□ -1.65
VPS45-206ENST00000472756 ANKRD34AQ69YU3 496 aa4.72□□□□□ -1.65
VPS45-206ENST00000472756 SHISA5Q8N114 240 aa4.72□□□□□ -1.65
VPS45-206ENST00000472756 CHMP7Q8WUX9 453 aaPredicted RBP4.72□□□□□ -1.65
VPS45-206ENST00000472756 USP20Q9Y2K6 914 aa4.72□□□□□ -1.65
VPS45-206ENST00000472756 CARMIL2Q6F5E8 1435 aa4.72□□□□□ -1.65
VPS45-206ENST00000472756 DDX3YO15523 660 aaKnown RBP4.71□□□□□ -1.66
VPS45-206ENST00000472756 ATP9BO43861 1147 aa4.71□□□□□ -1.66
VPS45-206ENST00000472756 SEC13P55735 322 aa4.71□□□□□ -1.66
VPS45-206ENST00000472756 DUOXA2Q1HG44 320 aa4.71□□□□□ -1.66
VPS45-206ENST00000472756 C11orf91Q3C1V1 193 aa4.71□□□□□ -1.66
VPS45-206ENST00000472756 ZNF648Q5T619 568 aaPredicted RBP4.71□□□□□ -1.66
VPS45-206ENST00000472756 COL13A1Q5TAT6 717 aaPredicted RBP4.71□□□□□ -1.66
VPS45-206ENST00000472756 WFDC3Q8IUB2 231 aa4.71□□□□□ -1.66
VPS45-206ENST00000472756 ZNF594Q96JF6 807 aaPredicted RBP4.71□□□□□ -1.66
VPS45-206ENST00000472756 PAK6Q9NQU5 681 aaPredicted RBP4.71□□□□□ -1.66
VPS45-206ENST00000472756 LRFN2Q9ULH4 789 aa4.71□□□□□ -1.66
VPS45-206ENST00000472756 MEGF11A6BM72 1044 aa4.7□□□□□ -1.66
VPS45-206ENST00000472756 RASA1P20936 1047 aa4.7□□□□□ -1.66
VPS45-206ENST00000472756 TXNDC11Q6PKC3 985 aa4.7□□□□□ -1.66
VPS45-206ENST00000472756 OR13H1Q8NG92 308 aa4.7□□□□□ -1.66
VPS45-206ENST00000472756 UBASH3BQ8TF42 649 aa4.7□□□□□ -1.66
VPS45-206ENST00000472756 KLHDC7BQ96G42 594 aa4.7□□□□□ -1.66
VPS45-206ENST00000472756 MFSD14AQ96MC6 490 aa4.7□□□□□ -1.66
VPS45-206ENST00000472756 ANGEL1Q9UNK9 670 aaKnown RBP4.7□□□□□ -1.66
VPS45-206ENST00000472756 KIF4AO95239 1232 aa4.69□□□□□ -1.66
VPS45-206ENST00000472756 EPHA1P21709 976 aa4.69□□□□□ -1.66
VPS45-206ENST00000472756 CDC27P30260 824 aa4.69□□□□□ -1.66
VPS45-206ENST00000472756 WEE1P30291 646 aa4.69□□□□□ -1.66
VPS45-206ENST00000472756 ZNF124Q15973 351 aa4.69□□□□□ -1.66
VPS45-206ENST00000472756 KRTAP19-4Q3LI73 84 aa4.69□□□□□ -1.66
VPS45-206ENST00000472756 CARD10Q9BWT7 1032 aa4.69□□□□□ -1.66
VPS45-206ENST00000472756 ADAM19Q9H013 955 aa4.69□□□□□ -1.66
VPS45-206ENST00000472756 RBSNQ9H1K0 784 aa4.69□□□□□ -1.66
VPS45-206ENST00000472756 BSDC1Q9NW68 430 aaPredicted RBP4.69□□□□□ -1.66
VPS45-206ENST00000472756 LEMD3Q9Y2U8 911 aa4.69□□□□□ -1.66
VPS45-206ENST00000472756 MAP4P27816 1152 aaKnown RBP4.68□□□□□ -1.66
VPS45-206ENST00000472756 ATP11AP98196 1134 aa4.68□□□□□ -1.66
VPS45-206ENST00000472756 TRIP4Q15650 581 aaPredicted RBP4.68□□□□□ -1.66
VPS45-206ENST00000472756 NLRP13Q86W25 1043 aa4.68□□□□□ -1.66
VPS45-206ENST00000472756 GATA6Q92908 595 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms