RNA–Protein interactions for RNA: ENST00000472638.1

UBQLN4-203, Transcript of ubiquilin 4, humanhuman

TSL 5

Gene UBQLN4, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-203ENST00000472638 DNAJC5GQ8N7S2 189 aa25.21■■□□□ 1.63
UBQLN4-203ENST00000472638 PLA2G12BQ9BX93 195 aa25.21■■□□□ 1.63
UBQLN4-203ENST00000472638 PODXL2Q9NZ53 605 aa25.21■■□□□ 1.63
UBQLN4-203ENST00000472638 GGA1Q9UJY5 639 aa25.21■■□□□ 1.63
UBQLN4-203ENST00000472638 LTBP1Q14766 1721 aa25.2■■□□□ 1.63
UBQLN4-203ENST00000472638 TNIP1Q15025 636 aa25.2■■□□□ 1.62
UBQLN4-203ENST00000472638 FAM161AQ3B820 660 aa25.2■■□□□ 1.62
UBQLN4-203ENST00000472638 BCL2L13Q9BXK5 485 aa25.2■■□□□ 1.62
UBQLN4-203ENST00000472638 ZC3H12CQ9C0D7 883 aaKnown RBP25.2■■□□□ 1.62
UBQLN4-203ENST00000472638 RTL9Q8NET4 1388 aa25.19■■□□□ 1.62
UBQLN4-203ENST00000472638 SSH1Q8WYL5 1049 aa25.19■■□□□ 1.62
UBQLN4-203ENST00000472638 ECE2O60344 883 aa25.18■■□□□ 1.62
UBQLN4-203ENST00000472638 ITGA6P23229 1130 aa25.18■■□□□ 1.62
UBQLN4-203ENST00000472638 MAP1SQ66K74 1059 aaPredicted RBP25.18■■□□□ 1.62
UBQLN4-203ENST00000472638 BSDC1Q9NW68 430 aaPredicted RBP25.18■■□□□ 1.62
UBQLN4-203ENST00000472638 GPRC5DQ9NZD1 345 aa25.18■■□□□ 1.62
UBQLN4-203ENST00000472638 XDHP47989 1333 aa25.17■■□□□ 1.62
UBQLN4-203ENST00000472638 CSF1RP07333 972 aa25.17■■□□□ 1.62
UBQLN4-203ENST00000472638 IGHMBP2P38935 993 aaKnown RBP25.17■■□□□ 1.62
UBQLN4-203ENST00000472638 SRCIN1Q9C0H9 1055 aa25.17■■□□□ 1.62
UBQLN4-203ENST00000472638 KCNQ5Q9NR82 932 aa25.17■■□□□ 1.62
UBQLN4-203ENST00000472638 C9orf78Q9NZ63 289 aaPredicted RBP25.17■■□□□ 1.62
UBQLN4-203ENST00000472638 MINPP1Q9UNW1 487 aa25.17■■□□□ 1.62
UBQLN4-203ENST00000472638 WTIPA6NIX2 430 aaPredicted RBP25.16■■□□□ 1.62
UBQLN4-203ENST00000472638 G3V3G9 751 aa25.16■■□□□ 1.62
UBQLN4-203ENST00000472638 GRM8O00222 908 aa25.16■■□□□ 1.62
UBQLN4-203ENST00000472638 FOXO4P98177 505 aa25.16■■□□□ 1.62
UBQLN4-203ENST00000472638 DCAF8Q5TAQ9 597 aa25.16■■□□□ 1.62
UBQLN4-203ENST00000472638 TRMT2AQ8IZ69 625 aaKnown RBP25.16■■□□□ 1.62
UBQLN4-203ENST00000472638 ZBTB12Q9Y330 459 aaPredicted RBP25.16■■□□□ 1.62
UBQLN4-203ENST00000472638 CHMP3Q9Y3E7 222 aa25.16■■□□□ 1.62
UBQLN4-203ENST00000472638 MYH3P11055 1940 aa25.16■■□□□ 1.62
UBQLN4-203ENST00000472638 PSMD14O00487 310 aa25.15■■□□□ 1.62
UBQLN4-203ENST00000472638 ALDH1L1O75891 902 aa25.15■■□□□ 1.62
UBQLN4-203ENST00000472638 ATP2B4P23634 1241 aa25.15■■□□□ 1.62
UBQLN4-203ENST00000472638 ITGBL1O95965 494 aaPredicted RBP25.14■■□□□ 1.62
UBQLN4-203ENST00000472638 EPHA10Q5JZY3 1008 aa25.14■■□□□ 1.62
UBQLN4-203ENST00000472638 CNTROBQ8N137 903 aa25.14■■□□□ 1.62
UBQLN4-203ENST00000472638 KLRG1Q96E93 195 aa25.14■■□□□ 1.62
UBQLN4-203ENST00000472638 ADARB2Q9NS39 739 aaKnown RBP25.14■■□□□ 1.62
UBQLN4-203ENST00000472638 ADAMTSL1Q8N6G6 1762 aa25.13■■□□□ 1.61
UBQLN4-203ENST00000472638 SHTN1A0MZ66 631 aa25.13■■□□□ 1.61
UBQLN4-203ENST00000472638 ANKRD18BA2A2Z9 1011 aa25.13■■□□□ 1.61
UBQLN4-203ENST00000472638 USP50Q70EL3 339 aaPredicted RBP25.13■■□□□ 1.61
UBQLN4-203ENST00000472638 MPHOSPH8Q99549 860 aa25.13■■□□□ 1.61
UBQLN4-203ENST00000472638 SMC4Q9NTJ3 1288 aa25.13■■□□□ 1.61
UBQLN4-203ENST00000472638 PASKQ96RG2 1323 aa25.12■■□□□ 1.61
UBQLN4-203ENST00000472638 SPEF2Q9C093 1822 aa25.12■■□□□ 1.61
UBQLN4-203ENST00000472638 LMBR1LQ6UX01 489 aa25.12■■□□□ 1.61
UBQLN4-203ENST00000472638 CNOT7Q9UIV1 285 aaKnown RBP25.12■■□□□ 1.61
UBQLN4-203ENST00000472638 PTPRCP08575 1304 aa25.12■■□□□ 1.61
UBQLN4-203ENST00000472638 CCT4P50991 539 aaKnown RBP25.11■■□□□ 1.61
UBQLN4-203ENST00000472638 IFIT5Q13325 482 aaKnown RBP25.11■■□□□ 1.61
UBQLN4-203ENST00000472638 ALDH1L2Q3SY69 923 aa25.1■■□□□ 1.61
UBQLN4-203ENST00000472638 MICALL2Q8IY33 904 aa25.09■■□□□ 1.61
UBQLN4-203ENST00000472638 SUCLG2Q96I99 432 aa25.09■■□□□ 1.61
UBQLN4-203ENST00000472638 CREBZFQ9NS37 354 aa25.09■■□□□ 1.61
UBQLN4-203ENST00000472638 NBPF7P0C2Y1 421 aaPredicted RBP25.08■■□□□ 1.61
UBQLN4-203ENST00000472638 TRPM4Q8TD43 1214 aa25.08■■□□□ 1.61
UBQLN4-203ENST00000472638 ZNF594Q96JF6 807 aaPredicted RBP25.08■■□□□ 1.61
UBQLN4-203ENST00000472638 H7C1D1 291 aa25.07■■□□□ 1.6
UBQLN4-203ENST00000472638 HIRAP54198 1017 aaPredicted RBP25.07■■□□□ 1.6
UBQLN4-203ENST00000472638 FMR1Q06787 632 aaKnown RBP eCLIP25.07■■□□□ 1.61e-8■■■■■ 79.6
UBQLN4-203ENST00000472638 CHRNDQ07001 517 aa25.07■■□□□ 1.6
UBQLN4-203ENST00000472638 DPF2Q92785 391 aa25.07■■□□□ 1.6
UBQLN4-203ENST00000472638 ANKRD2Q9GZV1 360 aa25.07■■□□□ 1.6
UBQLN4-203ENST00000472638 CCDC57Q2TAC2 916 aa25.06■■□□□ 1.6
UBQLN4-203ENST00000472638 HELBQ8NG08 1087 aaPredicted RBP25.06■■□□□ 1.6
UBQLN4-203ENST00000472638 MKRN1Q9UHC7 482 aaKnown RBP25.06■■□□□ 1.6
UBQLN4-203ENST00000472638 LEMD3Q9Y2U8 911 aa25.06■■□□□ 1.6
UBQLN4-203ENST00000472638 MED23Q9ULK4 1368 aa25.05■■□□□ 1.6
UBQLN4-203ENST00000472638 TMEM88BA6NKF7 163 aa25.05■■□□□ 1.6
UBQLN4-203ENST00000472638 VIL1P09327 827 aaKnown RBP25.05■■□□□ 1.6
UBQLN4-203ENST00000472638 KCNJ4P48050 445 aa25.05■■□□□ 1.6
UBQLN4-203ENST00000472638 TAF7LQ5H9L4 462 aa25.05■■□□□ 1.6
UBQLN4-203ENST00000472638 SAMD7Q7Z3H4 446 aa25.05■■□□□ 1.6
UBQLN4-203ENST00000472638 TXNRD3Q86VQ6 643 aa25.05■■□□□ 1.6
UBQLN4-203ENST00000472638 KAZALD1Q96I82 304 aa25.05■■□□□ 1.6
UBQLN4-203ENST00000472638 ZNF804BA4D1E1 1349 aa25.05■■□□□ 1.6
UBQLN4-203ENST00000472638 TRAF5O00463 557 aa25.04■■□□□ 1.6
UBQLN4-203ENST00000472638 TAF5LO75529 589 aa25.04■■□□□ 1.6
UBQLN4-203ENST00000472638 CT47B1P0C2W7 299 aaPredicted RBP25.04■■□□□ 1.6
UBQLN4-203ENST00000472638 RPS12P25398 132 aaKnown RBP25.04■■□□□ 1.6
UBQLN4-203ENST00000472638 KLRK1P26718 216 aa25.04■■□□□ 1.6
UBQLN4-203ENST00000472638 TBC1D10BQ4KMP7 808 aaPredicted RBP25.04■■□□□ 1.6
UBQLN4-203ENST00000472638 RBM26Q5T8P6 1007 aaKnown RBP25.04■■□□□ 1.6
UBQLN4-203ENST00000472638 SNAP23O00161 211 aa25.03■■□□□ 1.6
UBQLN4-203ENST00000472638 NOB1Q9ULX3 412 aaKnown RBP25.03■■□□□ 1.6
UBQLN4-203ENST00000472638 SCN9AQ15858 1988 aa25.03■■□□□ 1.6
UBQLN4-203ENST00000472638 UTYO14607 1347 aa25.03■■□□□ 1.6
UBQLN4-203ENST00000472638 EGFRP00533 1210 aa25.02■■□□□ 1.6
UBQLN4-203ENST00000472638 RSBN1LQ6PCB5 846 aaPredicted RBP25.02■■□□□ 1.6
UBQLN4-203ENST00000472638 LDHAL6AQ6ZMR3 332 aa25.02■■□□□ 1.6
UBQLN4-203ENST00000472638 PODNQ7Z5L7 613 aa25.02■■□□□ 1.6
UBQLN4-203ENST00000472638 FBXW7Q969H0 707 aa25.02■■□□□ 1.6
UBQLN4-203ENST00000472638 BICC1Q9H694 974 aaKnown RBP25.02■■□□□ 1.6
UBQLN4-203ENST00000472638 USP17L3A6NCW0 530 aa25.01■■□□□ 1.59
UBQLN4-203ENST00000472638 USP17L4A6NCW7 530 aa25.01■■□□□ 1.59
UBQLN4-203ENST00000472638 PLIN1O60240 522 aa25.01■■□□□ 1.59
UBQLN4-203ENST00000472638 USP17L1Q7RTZ2 530 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms