RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 ZNF296Q8WUU4 475 aaPredicted RBP18.27■□□□□ 0.52
SMURF1-203ENST00000472627 NECTIN2Q92692 538 aa18.27■□□□□ 0.52
SMURF1-203ENST00000472627 BABAM1Q9NWV8 329 aa18.27■□□□□ 0.52
SMURF1-203ENST00000472627 DLG5Q8TDM6 1919 aa18.26■□□□□ 0.51
SMURF1-203ENST00000472627 HSP90B1P14625 803 aaKnown RBP18.26■□□□□ 0.51
SMURF1-203ENST00000472627 GPSM2P81274 684 aa18.26■□□□□ 0.51
SMURF1-203ENST00000472627 AGBL3Q8NEM8 1001 aa18.26■□□□□ 0.51
SMURF1-203ENST00000472627 XAGE3Q8WTP9 111 aa18.26■□□□□ 0.51
SMURF1-203ENST00000472627 POLLQ9UGP5 575 aa18.26■□□□□ 0.51
SMURF1-203ENST00000472627 RTL9Q8NET4 1388 aa18.26■□□□□ 0.51
SMURF1-203ENST00000472627 PITPNM2Q9BZ72 1349 aa18.25■□□□□ 0.51
SMURF1-203ENST00000472627 POLR2AP24928 1970 aaKnown RBP18.25■□□□□ 0.51
SMURF1-203ENST00000472627 ANXA1P04083 346 aa18.25■□□□□ 0.51
SMURF1-203ENST00000472627 NF2P35240 595 aa18.25■□□□□ 0.51
SMURF1-203ENST00000472627 SREBF2Q12772 1141 aa18.25■□□□□ 0.51
SMURF1-203ENST00000472627 SCARF1Q14162 830 aa18.25■□□□□ 0.51
SMURF1-203ENST00000472627 SF3B3Q15393 1217 aaKnown RBP18.25■□□□□ 0.51
SMURF1-203ENST00000472627 PROSER3Q2NL68 480 aa18.25■□□□□ 0.51
SMURF1-203ENST00000472627 TBC1D16Q8TBP0 767 aa18.25■□□□□ 0.51
SMURF1-203ENST00000472627 CELF1Q92879 486 aaKnown RBP18.25■□□□□ 0.51
SMURF1-203ENST00000472627 ZNF280AP59817 542 aaPredicted RBP18.24■□□□□ 0.51
SMURF1-203ENST00000472627 TTLL12Q14166 644 aaPredicted RBP18.24■□□□□ 0.51
SMURF1-203ENST00000472627 ZNF609O15014 1411 aa18.23■□□□□ 0.51
SMURF1-203ENST00000472627 GPR25O00155 361 aa18.23■□□□□ 0.51
SMURF1-203ENST00000472627 TBC1D8O95759 1140 aa18.23■□□□□ 0.51
SMURF1-203ENST00000472627 LMOD3Q0VAK6 560 aa18.23■□□□□ 0.51
SMURF1-203ENST00000472627 RSBN1LQ6PCB5 846 aaPredicted RBP18.23■□□□□ 0.51
SMURF1-203ENST00000472627 ANKIB1Q9P2G1 1089 aa18.23■□□□□ 0.51
SMURF1-203ENST00000472627 FKTNO75072 461 aa18.22■□□□□ 0.51
SMURF1-203ENST00000472627 UFL1O94874 794 aa18.22■□□□□ 0.51
SMURF1-203ENST00000472627 USP17L8P0C7I0 530 aa18.22■□□□□ 0.51
SMURF1-203ENST00000472627 RPS8P62241 208 aaKnown RBP18.22■□□□□ 0.51
SMURF1-203ENST00000472627 PLEKHF1Q96S99 279 aa18.22■□□□□ 0.51
SMURF1-203ENST00000472627 KCNQ5Q9NR82 932 aa18.22■□□□□ 0.51
SMURF1-203ENST00000472627 GGA1Q9UJY5 639 aa18.22■□□□□ 0.51
SMURF1-203ENST00000472627 TM4SF4P48230 202 aa18.21■□□□□ 0.51
SMURF1-203ENST00000472627 INTS3Q68E01 1043 aaKnown RBP18.21■□□□□ 0.51
SMURF1-203ENST00000472627 PLBD2Q8NHP8 589 aa18.21■□□□□ 0.51
SMURF1-203ENST00000472627 FAM89AQ96GI7 184 aa18.21■□□□□ 0.51
SMURF1-203ENST00000472627 MYOZ2Q9NPC6 264 aa18.21■□□□□ 0.51
SMURF1-203ENST00000472627 PODXL2Q9NZ53 605 aa18.21■□□□□ 0.51
SMURF1-203ENST00000472627 ASTN2O75129 1339 aaPredicted RBP18.21■□□□□ 0.51
SMURF1-203ENST00000472627 ALDH1A1P00352 501 aa18.2■□□□□ 0.5
SMURF1-203ENST00000472627 HABP4Q5JVS0 413 aaKnown RBP18.2■□□□□ 0.5
SMURF1-203ENST00000472627 TAF1P21675 1872 aa18.2■□□□□ 0.5
SMURF1-203ENST00000472627 UBE2Q2LH0YL09 131 aa18.19■□□□□ 0.5
SMURF1-203ENST00000472627 ANKRD13DQ6ZTN6 518 aa18.19■□□□□ 0.5
SMURF1-203ENST00000472627 OGFOD1Q8N543 542 aa18.19■□□□□ 0.5
SMURF1-203ENST00000472627 IRS4O14654 1257 aaPredicted RBP18.18■□□□□ 0.5
SMURF1-203ENST00000472627 CFHR5Q9BXR6 569 aa18.18■□□□□ 0.5
SMURF1-203ENST00000472627 RIPK4P57078 832 aa18.17■□□□□ 0.5
SMURF1-203ENST00000472627 ARMC9Q7Z3E5 817 aa18.17■□□□□ 0.5
SMURF1-203ENST00000472627 PODNQ7Z5L7 613 aa18.17■□□□□ 0.5
SMURF1-203ENST00000472627 ISCA1Q9BUE6 129 aa18.17■□□□□ 0.5
SMURF1-203ENST00000472627 USP17L3A6NCW0 530 aa18.16■□□□□ 0.5
SMURF1-203ENST00000472627 USP17L4A6NCW7 530 aa18.16■□□□□ 0.5
SMURF1-203ENST00000472627 USP17L1Q7RTZ2 530 aa18.16■□□□□ 0.5
SMURF1-203ENST00000472627 ZNF428Q96B54 188 aa18.16■□□□□ 0.5
SMURF1-203ENST00000472627 CHPF2Q9P2E5 772 aa18.16■□□□□ 0.5
SMURF1-203ENST00000472627 DBF4Q9UBU7 674 aaPredicted RBP18.16■□□□□ 0.5
SMURF1-203ENST00000472627 ATP5J2-PTCD1G3V325 749 aa18.15■□□□□ 0.5
SMURF1-203ENST00000472627 MMP14P50281 582 aa18.15■□□□□ 0.5
SMURF1-203ENST00000472627 MKRN3Q13064 507 aaKnown RBP18.15■□□□□ 0.5
SMURF1-203ENST00000472627 CCDC152Q4G0S7 254 aa18.15■□□□□ 0.5
SMURF1-203ENST00000472627 RTL5Q5HYW3 569 aaPredicted RBP18.15■□□□□ 0.5
SMURF1-203ENST00000472627 HDGFL1Q5TGJ6 251 aa18.15■□□□□ 0.5
SMURF1-203ENST00000472627 MOB2Q70IA6 237 aa18.15■□□□□ 0.5
SMURF1-203ENST00000472627 XDHP47989 1333 aa18.15■□□□□ 0.5
SMURF1-203ENST00000472627 MYO3BQ8WXR4 1341 aa18.15■□□□□ 0.5
SMURF1-203ENST00000472627 SCN9AQ15858 1988 aa18.14■□□□□ 0.49
SMURF1-203ENST00000472627 INHBEP58166 350 aa18.14■□□□□ 0.49
SMURF1-203ENST00000472627 TRIM17Q9Y577 477 aa18.14■□□□□ 0.49
SMURF1-203ENST00000472627 HOXB7P09629 217 aa18.13■□□□□ 0.49
SMURF1-203ENST00000472627 ATP2B4P23634 1241 aa18.13■□□□□ 0.49
SMURF1-203ENST00000472627 TRIM28Q13263 835 aaKnown RBP18.13■□□□□ 0.49
SMURF1-203ENST00000472627 GMLQ99445 158 aa18.13■□□□□ 0.49
SMURF1-203ENST00000472627 HYPKQ9NX55 129 aa18.13■□□□□ 0.49
SMURF1-203ENST00000472627 MANSC4A6NHS7 340 aaPredicted RBP18.12■□□□□ 0.49
SMURF1-203ENST00000472627 APOBEC3FQ8IUX4 373 aaKnown RBP18.12■□□□□ 0.49
SMURF1-203ENST00000472627 ZBTB38Q8NAP3 1195 aaPredicted RBP18.12■□□□□ 0.49
SMURF1-203ENST00000472627 GOLGA2Q08379 1002 aa18.11■□□□□ 0.49
SMURF1-203ENST00000472627 PRAMEF18Q5VWM3 479 aa18.11■□□□□ 0.49
SMURF1-203ENST00000472627 ANKRD18AQ8IVF6 992 aa18.11■□□□□ 0.49
SMURF1-203ENST00000472627 ERO1AQ96HE7 468 aa18.11■□□□□ 0.49
SMURF1-203ENST00000472627 PSME4Q14997 1843 aa18.1■□□□□ 0.49
SMURF1-203ENST00000472627 NBPF9Q3BBW0 867 aa18.1■□□□□ 0.49
SMURF1-203ENST00000472627 RIC3Q7Z5B4 369 aa18.1■□□□□ 0.49
SMURF1-203ENST00000472627 FBXW7Q969H0 707 aa18.1■□□□□ 0.49
SMURF1-203ENST00000472627 SEC31BQ9NQW1 1179 aa18.1■□□□□ 0.49
SMURF1-203ENST00000472627 SPRYD7Q5W111 196 aa18.09■□□□□ 0.49
SMURF1-203ENST00000472627 OTUD7BQ6GQQ9 843 aa18.09■□□□□ 0.49
SMURF1-203ENST00000472627 CDC5LQ99459 802 aaKnown RBP18.09■□□□□ 0.49
SMURF1-203ENST00000472627 SCAF8Q9UPN6 1271 aaKnown RBP18.09■□□□□ 0.49
SMURF1-203ENST00000472627 LAS1LQ9Y4W2 734 aaKnown RBP18.09■□□□□ 0.49
SMURF1-203ENST00000472627 MED23Q9ULK4 1368 aa18.08■□□□□ 0.49
SMURF1-203ENST00000472627 WNT10BO00744 389 aa18.08■□□□□ 0.48
SMURF1-203ENST00000472627 PDE8AO60658 829 aa18.08■□□□□ 0.48
SMURF1-203ENST00000472627 TMPOP42166 694 aaKnown RBP18.08■□□□□ 0.48
SMURF1-203ENST00000472627 PTPN12Q05209 780 aaKnown RBP18.08■□□□□ 0.48
SMURF1-203ENST00000472627 OTOP1Q7RTM1 612 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms