RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 RAB11FIP3O75154 756 aa13.01□□□□□ -0.33
UBE2F-220ENST00000472479 HOXA10P31260 410 aaPredicted RBP13.01□□□□□ -0.33
UBE2F-220ENST00000472479 FHDC1Q9C0D6 1143 aaPredicted RBP13.01□□□□□ -0.33
UBE2F-220ENST00000472479 ANKIB1Q9P2G1 1089 aa13.01□□□□□ -0.33
UBE2F-220ENST00000472479 RTL9Q8NET4 1388 aa13.01□□□□□ -0.33
UBE2F-220ENST00000472479 RIC1Q4ADV7 1423 aa13□□□□□ -0.33
UBE2F-220ENST00000472479 C10orf71Q711Q0 1435 aa13□□□□□ -0.33
UBE2F-220ENST00000472479 IL15P40933 162 aaPredicted RBP13□□□□□ -0.33
UBE2F-220ENST00000472479 RFX5P48382 616 aaPredicted RBP13□□□□□ -0.33
UBE2F-220ENST00000472479 LRRC24Q50LG9 513 aa13□□□□□ -0.33
UBE2F-220ENST00000472479 DALRD3Q5D0E6 543 aaKnown RBP13□□□□□ -0.33
UBE2F-220ENST00000472479 TMC4Q7Z404 712 aa13□□□□□ -0.33
UBE2F-220ENST00000472479 PUS3Q9BZE2 481 aaKnown RBP13□□□□□ -0.33
UBE2F-220ENST00000472479 DCTPP1Q9H773 170 aa13□□□□□ -0.33
UBE2F-220ENST00000472479 BSDC1Q9NW68 430 aaPredicted RBP13□□□□□ -0.33
UBE2F-220ENST00000472479 BCS1LQ9Y276 419 aa13□□□□□ -0.33
UBE2F-220ENST00000472479 MROH5Q6ZUA9 1318 aa12.99□□□□□ -0.33
UBE2F-220ENST00000472479 CENPQQ7L2Z9 268 aaPredicted RBP12.99□□□□□ -0.33
UBE2F-220ENST00000472479 HELBQ8NG08 1087 aaPredicted RBP12.99□□□□□ -0.33
UBE2F-220ENST00000472479 KIF1BPQ96EK5 621 aa12.99□□□□□ -0.33
UBE2F-220ENST00000472479 LRRCC1Q9C099 1032 aa12.99□□□□□ -0.33
UBE2F-220ENST00000472479 ANKRD2Q9GZV1 360 aa12.99□□□□□ -0.33
UBE2F-220ENST00000472479 FBXO3Q9UK99 471 aa12.99□□□□□ -0.33
UBE2F-220ENST00000472479 NSFL1CQ9UNZ2 370 aaKnown RBP12.99□□□□□ -0.33
UBE2F-220ENST00000472479 ABCB7O75027 752 aa12.98□□□□□ -0.33
UBE2F-220ENST00000472479 CIAO1O76071 339 aa12.98□□□□□ -0.33
UBE2F-220ENST00000472479 GORABQ5T7V8 394 aa12.98□□□□□ -0.33
UBE2F-220ENST00000472479 PRPF40BQ6NWY9 871 aaKnown RBP12.98□□□□□ -0.33
UBE2F-220ENST00000472479 NEUROD6Q96NK8 337 aa12.98□□□□□ -0.33
UBE2F-220ENST00000472479 NOP58Q9Y2X3 529 aaKnown RBP12.98□□□□□ -0.33
UBE2F-220ENST00000472479 C6orf229H3BNL8 230 aa12.97□□□□□ -0.33
UBE2F-220ENST00000472479 C21orf2O43822 256 aa12.97□□□□□ -0.33
UBE2F-220ENST00000472479 CHRNDQ07001 517 aa12.97□□□□□ -0.33
UBE2F-220ENST00000472479 TFCP2Q12800 502 aa12.97□□□□□ -0.33
UBE2F-220ENST00000472479 SP8Q8IXZ3 490 aa12.97□□□□□ -0.33
UBE2F-220ENST00000472479 CLASRPQ8N2M8 674 aaKnown RBP12.97□□□□□ -0.33
UBE2F-220ENST00000472479 NLGN2Q8NFZ4 835 aa12.97□□□□□ -0.33
UBE2F-220ENST00000472479 SYT17Q9BSW7 474 aa12.97□□□□□ -0.33
UBE2F-220ENST00000472479 IL1RAPL2Q9NP60 686 aa12.97□□□□□ -0.33
UBE2F-220ENST00000472479 MINPP1Q9UNW1 487 aa12.97□□□□□ -0.33
UBE2F-220ENST00000472479 AKAP2Q9Y2D5 859 aa12.97□□□□□ -0.33
UBE2F-220ENST00000472479 DDX60Q8IY21 1712 aaKnown RBP12.97□□□□□ -0.33
UBE2F-220ENST00000472479 G3V3G9 751 aa12.97□□□□□ -0.33
UBE2F-220ENST00000472479 TAF5LO75529 589 aa12.97□□□□□ -0.33
UBE2F-220ENST00000472479 DCAF8Q5TAQ9 597 aa12.97□□□□□ -0.33
UBE2F-220ENST00000472479 MPNDQ8N594 471 aa12.97□□□□□ -0.33
UBE2F-220ENST00000472479 RHPN1Q8TCX5 695 aa12.97□□□□□ -0.33
UBE2F-220ENST00000472479 ATP6V0A2Q9Y487 856 aa12.97□□□□□ -0.33
UBE2F-220ENST00000472479 RIPOR2Q9Y4F9 1068 aa12.97□□□□□ -0.33
UBE2F-220ENST00000472479 NRXN2Q9P2S2 1712 aa12.96□□□□□ -0.33
UBE2F-220ENST00000472479 SMARCA5O60264 1052 aaPredicted RBP12.96□□□□□ -0.34
UBE2F-220ENST00000472479 IFIT2P09913 472 aaKnown RBP12.96□□□□□ -0.34
UBE2F-220ENST00000472479 SOGA3Q5TF21 947 aa12.96□□□□□ -0.34
UBE2F-220ENST00000472479 CC2D2BQ6DHV5 1058 aa12.96□□□□□ -0.34
UBE2F-220ENST00000472479 DPP8Q6V1X1 898 aaPredicted RBP12.96□□□□□ -0.34
UBE2F-220ENST00000472479 TNRC6CQ9HCJ0 1690 aaKnown RBP12.95□□□□□ -0.34
UBE2F-220ENST00000472479 SLC5A1P13866 664 aa12.95□□□□□ -0.34
UBE2F-220ENST00000472479 KCNA3P22001 575 aa12.95□□□□□ -0.34
UBE2F-220ENST00000472479 ATG9AQ7Z3C6 839 aa12.95□□□□□ -0.34
UBE2F-220ENST00000472479 AACSQ86V21 672 aa12.95□□□□□ -0.34
UBE2F-220ENST00000472479 LNPKQ9C0E8 428 aa12.95□□□□□ -0.34
UBE2F-220ENST00000472479 GGA1Q9UJY5 639 aa12.95□□□□□ -0.34
UBE2F-220ENST00000472479 MYH3P11055 1940 aa12.94□□□□□ -0.34
UBE2F-220ENST00000472479 XDHP47989 1333 aa12.94□□□□□ -0.34
UBE2F-220ENST00000472479 UFL1O94874 794 aa12.94□□□□□ -0.34
UBE2F-220ENST00000472479 SASH1O94885 1247 aa12.94□□□□□ -0.34
UBE2F-220ENST00000472479 PDE8BO95263 885 aa12.94□□□□□ -0.34
UBE2F-220ENST00000472479 IFIT1P09914 478 aaKnown RBP12.94□□□□□ -0.34
UBE2F-220ENST00000472479 ATP2B4P23634 1241 aa12.94□□□□□ -0.34
UBE2F-220ENST00000472479 GPSM2P81274 684 aa12.94□□□□□ -0.34
UBE2F-220ENST00000472479 GPR162Q16538 588 aa12.94□□□□□ -0.34
UBE2F-220ENST00000472479 ATP2B3Q16720 1220 aa12.94□□□□□ -0.34
UBE2F-220ENST00000472479 CCDC93Q567U6 631 aa12.94□□□□□ -0.34
UBE2F-220ENST00000472479 VPS37DQ86XT2 251 aa12.94□□□□□ -0.34
UBE2F-220ENST00000472479 SMC5Q8IY18 1101 aa12.94□□□□□ -0.34
UBE2F-220ENST00000472479 LAMB2P55268 1798 aa12.94□□□□□ -0.34
UBE2F-220ENST00000472479 TIMM10P62072 90 aa12.93□□□□□ -0.34
UBE2F-220ENST00000472479 PUM3Q15397 648 aaKnown RBP12.93□□□□□ -0.34
UBE2F-220ENST00000472479 CHD1LQ86WJ1 897 aa12.93□□□□□ -0.34
UBE2F-220ENST00000472479 RTKN2Q8IZC4 609 aa12.93□□□□□ -0.34
UBE2F-220ENST00000472479 EYA3Q99504 573 aa12.93□□□□□ -0.34
UBE2F-220ENST00000472479 CCDC8Q9H0W5 538 aaPredicted RBP12.93□□□□□ -0.34
UBE2F-220ENST00000472479 LEMD3Q9Y2U8 911 aa12.93□□□□□ -0.34
UBE2F-220ENST00000472479 ZNF804BA4D1E1 1349 aa12.93□□□□□ -0.34
UBE2F-220ENST00000472479 ANKRD31Q8N7Z5 1873 aa12.93□□□□□ -0.34
UBE2F-220ENST00000472479 RIMBP2O15034 1052 aa12.92□□□□□ -0.34
UBE2F-220ENST00000472479 FRAT2O75474 233 aaPredicted RBP12.92□□□□□ -0.34
UBE2F-220ENST00000472479 NUCB1Q02818 461 aa12.92□□□□□ -0.34
UBE2F-220ENST00000472479 GRIPAP1Q4V328 841 aa12.92□□□□□ -0.34
UBE2F-220ENST00000472479 TNNI3KQ59H18 835 aa12.92□□□□□ -0.34
UBE2F-220ENST00000472479 CAVIN4Q5BKX8 364 aa12.92□□□□□ -0.34
UBE2F-220ENST00000472479 OLFM4Q6UX06 510 aa12.92□□□□□ -0.34
UBE2F-220ENST00000472479 ARHGAP27Q6ZUM4 889 aa12.92□□□□□ -0.34
UBE2F-220ENST00000472479 SUPT20HQ8NEM7 779 aa12.92□□□□□ -0.34
UBE2F-220ENST00000472479 LPIN2Q92539 896 aa12.92□□□□□ -0.34
UBE2F-220ENST00000472479 GPATCH3Q96I76 525 aa12.92□□□□□ -0.34
UBE2F-220ENST00000472479 ZC3H12CQ9C0D7 883 aaKnown RBP12.92□□□□□ -0.34
UBE2F-220ENST00000472479 FPGT-TNNI3KV9GXZ4 949 aa12.92□□□□□ -0.34
UBE2F-220ENST00000472479 A0A1B0GUL7 405 aa12.91□□□□□ -0.34
UBE2F-220ENST00000472479 UBE4AQ14139 1066 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms