RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 DDX60Q8IY21 1712 aaKnown RBP13.15□□□□□ -0.3
SCAMP3-205ENST00000472397 THSD7BQ9C0I4 1608 aa13.14□□□□□ -0.31
SCAMP3-205ENST00000472397 UFL1O94874 794 aa13.14□□□□□ -0.31
SCAMP3-205ENST00000472397 ZNF157P51786 506 aaPredicted RBP13.14□□□□□ -0.31
SCAMP3-205ENST00000472397 KIF4BQ2VIQ3 1234 aa13.14□□□□□ -0.31
SCAMP3-205ENST00000472397 PRAMEF18Q5VWM3 479 aa13.14□□□□□ -0.31
SCAMP3-205ENST00000472397 MOB2Q70IA6 237 aa13.14□□□□□ -0.31
SCAMP3-205ENST00000472397 ZC3H15Q8WU90 426 aaKnown RBP13.14□□□□□ -0.31
SCAMP3-205ENST00000472397 RUNDC1Q96C34 613 aa13.14□□□□□ -0.31
SCAMP3-205ENST00000472397 MXD3Q9BW11 206 aa13.14□□□□□ -0.31
SCAMP3-205ENST00000472397 GBA2Q9HCG7 927 aaPredicted RBP13.14□□□□□ -0.31
SCAMP3-205ENST00000472397 MBIPQ9NS73 344 aa13.14□□□□□ -0.31
SCAMP3-205ENST00000472397 GGA3Q9NZ52 723 aa13.14□□□□□ -0.31
SCAMP3-205ENST00000472397 TRPA1O75762 1119 aa13.13□□□□□ -0.31
SCAMP3-205ENST00000472397 BRPF1P55201 1214 aaPredicted RBP13.13□□□□□ -0.31
SCAMP3-205ENST00000472397 SOX10P56693 466 aa13.13□□□□□ -0.31
SCAMP3-205ENST00000472397 RPS8P62241 208 aaKnown RBP13.13□□□□□ -0.31
SCAMP3-205ENST00000472397 RALBP1Q15311 655 aa13.13□□□□□ -0.31
SCAMP3-205ENST00000472397 SF3B3Q15393 1217 aaKnown RBP13.13□□□□□ -0.31
SCAMP3-205ENST00000472397 RGMBQ6NW40 437 aa13.13□□□□□ -0.31
SCAMP3-205ENST00000472397 C2orf69Q8N8R5 385 aa13.13□□□□□ -0.31
SCAMP3-205ENST00000472397 FBXW7Q969H0 707 aa13.13□□□□□ -0.31
SCAMP3-205ENST00000472397 DCPSQ96C86 337 aaKnown RBP13.13□□□□□ -0.31
SCAMP3-205ENST00000472397 ZC3H12CQ9C0D7 883 aaKnown RBP13.13□□□□□ -0.31
SCAMP3-205ENST00000472397 BABAM1Q9NWV8 329 aa13.13□□□□□ -0.31
SCAMP3-205ENST00000472397 ANKIB1Q9P2G1 1089 aa13.13□□□□□ -0.31
SCAMP3-205ENST00000472397 DBF4Q9UBU7 674 aaPredicted RBP13.13□□□□□ -0.31
SCAMP3-205ENST00000472397 POLR2AP24928 1970 aaKnown RBP13.12□□□□□ -0.31
SCAMP3-205ENST00000472397 FAM155AB1AL88 458 aaPredicted RBP13.12□□□□□ -0.31
SCAMP3-205ENST00000472397 CDCA5Q96FF9 252 aa13.12□□□□□ -0.31
SCAMP3-205ENST00000472397 EYA3Q99504 573 aa13.12□□□□□ -0.31
SCAMP3-205ENST00000472397 MYBBP1AQ9BQG0 1328 aaKnown RBP13.12□□□□□ -0.31
SCAMP3-205ENST00000472397 GOLGA2Q08379 1002 aa13.11□□□□□ -0.31
SCAMP3-205ENST00000472397 MKRN3Q13064 507 aaKnown RBP13.11□□□□□ -0.31
SCAMP3-205ENST00000472397 NOGQ13253 232 aa13.11□□□□□ -0.31
SCAMP3-205ENST00000472397 ANGEL2Q5VTE6 544 aaKnown RBP13.11□□□□□ -0.31
SCAMP3-205ENST00000472397 DPF2Q92785 391 aa13.11□□□□□ -0.31
SCAMP3-205ENST00000472397 HYPKQ9NX55 129 aa13.11□□□□□ -0.31
SCAMP3-205ENST00000472397 CDHR2Q9BYE9 1310 aa13.11□□□□□ -0.31
SCAMP3-205ENST00000472397 APAF1O14727 1248 aa13.1□□□□□ -0.31
SCAMP3-205ENST00000472397 SCARF1Q14162 830 aa13.1□□□□□ -0.31
SCAMP3-205ENST00000472397 TMC4Q7Z404 712 aa13.1□□□□□ -0.31
SCAMP3-205ENST00000472397 C8orf58Q8NAV2 365 aa13.1□□□□□ -0.31
SCAMP3-205ENST00000472397 RNF186Q9NXI6 227 aa13.1□□□□□ -0.31
SCAMP3-205ENST00000472397 GGA1Q9UJY5 639 aa13.1□□□□□ -0.31
SCAMP3-205ENST00000472397 UBE2Q2LH0YL09 131 aa13.09□□□□□ -0.31
SCAMP3-205ENST00000472397 PRKG1Q13976 671 aa13.09□□□□□ -0.31
SCAMP3-205ENST00000472397 SULF1Q8IWU6 871 aa13.09□□□□□ -0.31
SCAMP3-205ENST00000472397 ZBTB38Q8NAP3 1195 aaPredicted RBP13.09□□□□□ -0.31
SCAMP3-205ENST00000472397 HHIPL1Q96JK4 782 aa13.09□□□□□ -0.31
SCAMP3-205ENST00000472397 SCN9AQ15858 1988 aa13.09□□□□□ -0.31
SCAMP3-205ENST00000472397 LRRC37AA6NMS7 1700 aa13.08□□□□□ -0.32
SCAMP3-205ENST00000472397 CA12O43570 354 aa13.08□□□□□ -0.32
SCAMP3-205ENST00000472397 VIL1P09327 827 aaKnown RBP13.08□□□□□ -0.32
SCAMP3-205ENST00000472397 CSRNP1Q96S65 589 aa13.08□□□□□ -0.32
SCAMP3-205ENST00000472397 RPS12P25398 132 aaKnown RBP13.07□□□□□ -0.32
SCAMP3-205ENST00000472397 TTLL12Q14166 644 aaPredicted RBP13.07□□□□□ -0.32
SCAMP3-205ENST00000472397 RSBN1LQ6PCB5 846 aaPredicted RBP13.07□□□□□ -0.32
SCAMP3-205ENST00000472397 TSPYL6Q8N831 410 aa13.07□□□□□ -0.32
SCAMP3-205ENST00000472397 CWC25Q9NXE8 425 aaPredicted RBP13.07□□□□□ -0.32
SCAMP3-205ENST00000472397 FZD1Q9UP38 647 aa13.07□□□□□ -0.32
SCAMP3-205ENST00000472397 PDE8AO60658 829 aa13.06□□□□□ -0.32
SCAMP3-205ENST00000472397 TBC1D8O95759 1140 aa13.06□□□□□ -0.32
SCAMP3-205ENST00000472397 SLC10A3P09131 477 aa13.06□□□□□ -0.32
SCAMP3-205ENST00000472397 RGS19P49795 217 aa13.06□□□□□ -0.32
SCAMP3-205ENST00000472397 NBPF9Q3BBW0 867 aa13.06□□□□□ -0.32
SCAMP3-205ENST00000472397 CCDC152Q4G0S7 254 aa13.06□□□□□ -0.32
SCAMP3-205ENST00000472397 RASAL3Q86YV0 1011 aa13.06□□□□□ -0.32
SCAMP3-205ENST00000472397 ANKRD18AQ8IVF6 992 aa13.06□□□□□ -0.32
SCAMP3-205ENST00000472397 TSR2Q969E8 191 aaKnown RBP13.06□□□□□ -0.32
SCAMP3-205ENST00000472397 CCDC102AQ96A19 550 aa13.06□□□□□ -0.32
SCAMP3-205ENST00000472397 MAP3K2Q9Y2U5 619 aa13.06□□□□□ -0.32
SCAMP3-205ENST00000472397 SASH1O94885 1247 aa13.05□□□□□ -0.32
SCAMP3-205ENST00000472397 SLC34A2O95436 690 aa13.05□□□□□ -0.32
SCAMP3-205ENST00000472397 PCCAP05165 728 aaPredicted RBP13.05□□□□□ -0.32
SCAMP3-205ENST00000472397 ZNF853P0CG23 659 aa13.05□□□□□ -0.32
SCAMP3-205ENST00000472397 KLRK1P26718 216 aa13.05□□□□□ -0.32
SCAMP3-205ENST00000472397 G2E3Q7L622 706 aa13.05□□□□□ -0.32
SCAMP3-205ENST00000472397 GREM2Q9H772 168 aa13.05□□□□□ -0.32
SCAMP3-205ENST00000472397 MYOZ2Q9NPC6 264 aa13.05□□□□□ -0.32
SCAMP3-205ENST00000472397 HOXB7P09629 217 aa13.04□□□□□ -0.32
SCAMP3-205ENST00000472397 USP17L8P0C7I0 530 aa13.04□□□□□ -0.32
SCAMP3-205ENST00000472397 TRIM28Q13263 835 aaKnown RBP13.04□□□□□ -0.32
SCAMP3-205ENST00000472397 CWF19L2Q2TBE0 894 aaKnown RBP13.04□□□□□ -0.32
SCAMP3-205ENST00000472397 NCBP3Q53F19 620 aaKnown RBP13.04□□□□□ -0.32
SCAMP3-205ENST00000472397 TXNRD3Q86VQ6 643 aa13.04□□□□□ -0.32
SCAMP3-205ENST00000472397 CCDC191Q8NCU4 936 aa13.04□□□□□ -0.32
SCAMP3-205ENST00000472397 METTL22Q9BUU2 404 aaPredicted RBP13.04□□□□□ -0.32
SCAMP3-205ENST00000472397 PODXL2Q9NZ53 605 aa13.04□□□□□ -0.32
SCAMP3-205ENST00000472397 PI4KAP2A4QPH2 592 aa13.03□□□□□ -0.32
SCAMP3-205ENST00000472397 USP17L3A6NCW0 530 aa13.03□□□□□ -0.32
SCAMP3-205ENST00000472397 USP17L4A6NCW7 530 aa13.03□□□□□ -0.32
SCAMP3-205ENST00000472397 IGKV5-2P06315 115 aa13.03□□□□□ -0.32
SCAMP3-205ENST00000472397 ATP2B4P23634 1241 aa13.03□□□□□ -0.32
SCAMP3-205ENST00000472397 ZNF280AP59817 542 aaPredicted RBP13.03□□□□□ -0.32
SCAMP3-205ENST00000472397 CCDC184Q52MB2 194 aa13.03□□□□□ -0.32
SCAMP3-205ENST00000472397 USP17L1Q7RTZ2 530 aa13.03□□□□□ -0.32
SCAMP3-205ENST00000472397 PI4KAP1Q8N8J0 262 aa13.03□□□□□ -0.32
SCAMP3-205ENST00000472397 XDHP47989 1333 aa13.03□□□□□ -0.32
SCAMP3-205ENST00000472397 SNAP23O00161 211 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms