RNA–Protein interactions for RNA: ENST00000472246.5

NUDCD3-205, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-205ENST00000472246 UFL1O94874 794 aa12.68□□□□□ -0.38
NUDCD3-205ENST00000472246 DDX58O95786 925 aaKnown RBP12.68□□□□□ -0.38
NUDCD3-205ENST00000472246 EGFRP00533 1210 aa12.68□□□□□ -0.38
NUDCD3-205ENST00000472246 ECE1P42892 770 aa12.68□□□□□ -0.38
NUDCD3-205ENST00000472246 MAP2K1Q02750 393 aaPredicted RBP12.68□□□□□ -0.38
NUDCD3-205ENST00000472246 CCDC152Q4G0S7 254 aa12.68□□□□□ -0.38
NUDCD3-205ENST00000472246 TBC1D10BQ4KMP7 808 aaPredicted RBP12.68□□□□□ -0.38
NUDCD3-205ENST00000472246 DLK2Q6UY11 383 aa12.68□□□□□ -0.38
NUDCD3-205ENST00000472246 SAMD7Q7Z3H4 446 aa12.68□□□□□ -0.38
NUDCD3-205ENST00000472246 ZC3H15Q8WU90 426 aaKnown RBP12.68□□□□□ -0.38
NUDCD3-205ENST00000472246 EYA3Q99504 573 aa12.68□□□□□ -0.38
NUDCD3-205ENST00000472246 MAP3K2Q9Y2U5 619 aa12.68□□□□□ -0.38
NUDCD3-205ENST00000472246 SPEF2Q9C093 1822 aa12.67□□□□□ -0.38
NUDCD3-205ENST00000472246 PDE8AO60658 829 aa12.67□□□□□ -0.38
NUDCD3-205ENST00000472246 SAPCD2Q86UD0 394 aa12.67□□□□□ -0.38
NUDCD3-205ENST00000472246 DPF2Q92785 391 aa12.67□□□□□ -0.38
NUDCD3-205ENST00000472246 PODXL2Q9NZ53 605 aa12.67□□□□□ -0.38
NUDCD3-205ENST00000472246 ANKIB1Q9P2G1 1089 aa12.67□□□□□ -0.38
NUDCD3-205ENST00000472246 PI4KAP2A4QPH2 592 aa12.66□□□□□ -0.38
NUDCD3-205ENST00000472246 IGKV5-2P06315 115 aa12.66□□□□□ -0.38
NUDCD3-205ENST00000472246 CDC37L1Q7L3B6 337 aa12.66□□□□□ -0.38
NUDCD3-205ENST00000472246 G2E3Q7L622 706 aa12.66□□□□□ -0.38
NUDCD3-205ENST00000472246 USP48Q86UV5 1035 aa12.66□□□□□ -0.38
NUDCD3-205ENST00000472246 WWC1Q8IX03 1113 aa12.66□□□□□ -0.38
NUDCD3-205ENST00000472246 PI4KAP1Q8N8J0 262 aa12.66□□□□□ -0.38
NUDCD3-205ENST00000472246 GGA1Q9UJY5 639 aa12.66□□□□□ -0.38
NUDCD3-205ENST00000472246 MYH3P11055 1940 aa12.66□□□□□ -0.38
NUDCD3-205ENST00000472246 HSP90B1P14625 803 aaKnown RBP12.65□□□□□ -0.38
NUDCD3-205ENST00000472246 RPS12P25398 132 aaKnown RBP12.65□□□□□ -0.38
NUDCD3-205ENST00000472246 CTSWP56202 376 aa12.65□□□□□ -0.38
NUDCD3-205ENST00000472246 CWF19L2Q2TBE0 894 aaKnown RBP12.65□□□□□ -0.38
NUDCD3-205ENST00000472246 RBM26Q5T8P6 1007 aaKnown RBP12.65□□□□□ -0.38
NUDCD3-205ENST00000472246 KSR2Q6VAB6 950 aa12.65□□□□□ -0.38
NUDCD3-205ENST00000472246 ZC3H12CQ9C0D7 883 aaKnown RBP12.65□□□□□ -0.38
NUDCD3-205ENST00000472246 TSKSQ9UJT2 592 aa12.65□□□□□ -0.38
NUDCD3-205ENST00000472246 PSME4Q14997 1843 aa12.65□□□□□ -0.39
NUDCD3-205ENST00000472246 POLR2AP24928 1970 aaKnown RBP12.64□□□□□ -0.39
NUDCD3-205ENST00000472246 ADM5C9JUS6 153 aa12.64□□□□□ -0.39
NUDCD3-205ENST00000472246 CCDC27Q2M243 656 aa12.64□□□□□ -0.39
NUDCD3-205ENST00000472246 TWISTNBQ3B726 338 aaPredicted RBP12.64□□□□□ -0.39
NUDCD3-205ENST00000472246 ANKRD18AQ8IVF6 992 aa12.64□□□□□ -0.39
NUDCD3-205ENST00000472246 STK31Q9BXU1 1019 aa12.64□□□□□ -0.39
NUDCD3-205ENST00000472246 XDHP47989 1333 aa12.63□□□□□ -0.39
NUDCD3-205ENST00000472246 WTIPA6NIX2 430 aaPredicted RBP12.63□□□□□ -0.39
NUDCD3-205ENST00000472246 G3V3G9 751 aa12.63□□□□□ -0.39
NUDCD3-205ENST00000472246 VIL1P09327 827 aaKnown RBP12.63□□□□□ -0.39
NUDCD3-205ENST00000472246 KIF4BQ2VIQ3 1234 aa12.63□□□□□ -0.39
NUDCD3-205ENST00000472246 DCAF8Q5TAQ9 597 aa12.63□□□□□ -0.39
NUDCD3-205ENST00000472246 KRT26Q7Z3Y9 468 aa12.63□□□□□ -0.39
NUDCD3-205ENST00000472246 TTLL11Q8NHH1 800 aa12.63□□□□□ -0.39
NUDCD3-205ENST00000472246 HHIPL1Q96JK4 782 aa12.63□□□□□ -0.39
NUDCD3-205ENST00000472246 BEGAINQ9BUH8 593 aa12.63□□□□□ -0.39
NUDCD3-205ENST00000472246 CHMP4AQ9BY43 222 aa12.63□□□□□ -0.39
NUDCD3-205ENST00000472246 GREM2Q9H772 168 aa12.63□□□□□ -0.39
NUDCD3-205ENST00000472246 ASTN2O75129 1339 aaPredicted RBP12.62□□□□□ -0.39
NUDCD3-205ENST00000472246 NEURL1BA8MQ27 555 aa12.62□□□□□ -0.39
NUDCD3-205ENST00000472246 MAP2K2P36507 400 aa12.62□□□□□ -0.39
NUDCD3-205ENST00000472246 HUNKP57058 714 aa12.62□□□□□ -0.39
NUDCD3-205ENST00000472246 NEXNQ0ZGT2 675 aa12.62□□□□□ -0.39
NUDCD3-205ENST00000472246 CDC5LQ99459 802 aaKnown RBP12.62□□□□□ -0.39
NUDCD3-205ENST00000472246 MRS2Q9HD23 443 aa12.62□□□□□ -0.39
NUDCD3-205ENST00000472246 GGA3Q9NZ52 723 aa12.62□□□□□ -0.39
NUDCD3-205ENST00000472246 IL16Q14005 1332 aa12.62□□□□□ -0.39
NUDCD3-205ENST00000472246 FANCIQ9NVI1 1328 aa12.62□□□□□ -0.39
NUDCD3-205ENST00000472246 ZNF646O15015 1829 aaPredicted RBP12.61□□□□□ -0.39
NUDCD3-205ENST00000472246 SLC4A2P04920 1241 aa12.61□□□□□ -0.39
NUDCD3-205ENST00000472246 ATP2B4P23634 1241 aa12.61□□□□□ -0.39
NUDCD3-205ENST00000472246 RSBN1LQ6PCB5 846 aaPredicted RBP12.61□□□□□ -0.39
NUDCD3-205ENST00000472246 UBE3BQ7Z3V4 1068 aa12.61□□□□□ -0.39
NUDCD3-205ENST00000472246 DCPSQ96C86 337 aaKnown RBP12.61□□□□□ -0.39
NUDCD3-205ENST00000472246 ZIC5Q96T25 663 aa12.61□□□□□ -0.39
NUDCD3-205ENST00000472246 SALL2Q9Y467 1007 aaPredicted RBP12.61□□□□□ -0.39
NUDCD3-205ENST00000472246 ZNF609O15014 1411 aa12.61□□□□□ -0.39
NUDCD3-205ENST00000472246 FLIIQ13045 1269 aa12.6□□□□□ -0.39
NUDCD3-205ENST00000472246 GBA2Q9HCG7 927 aaPredicted RBP12.6□□□□□ -0.39
NUDCD3-205ENST00000472246 MINPP1Q9UNW1 487 aa12.6□□□□□ -0.39
NUDCD3-205ENST00000472246 MED23Q9ULK4 1368 aa12.59□□□□□ -0.39
NUDCD3-205ENST00000472246 H7C1W4 665 aa12.59□□□□□ -0.39
NUDCD3-205ENST00000472246 BRPF1P55201 1214 aaPredicted RBP12.59□□□□□ -0.39
NUDCD3-205ENST00000472246 ZNF280AP59817 542 aaPredicted RBP12.59□□□□□ -0.39
NUDCD3-205ENST00000472246 FKBP5Q13451 457 aaPredicted RBP12.59□□□□□ -0.39
NUDCD3-205ENST00000472246 FAM161AQ3B820 660 aa12.59□□□□□ -0.39
NUDCD3-205ENST00000472246 ANGEL2Q5VTE6 544 aaKnown RBP12.59□□□□□ -0.39
NUDCD3-205ENST00000472246 AGBL3Q8NEM8 1001 aa12.59□□□□□ -0.39
NUDCD3-205ENST00000472246 ABHD8Q96I13 439 aa12.59□□□□□ -0.39
NUDCD3-205ENST00000472246 GMLQ99445 158 aa12.59□□□□□ -0.39
NUDCD3-205ENST00000472246 BSDC1Q9NW68 430 aaPredicted RBP12.59□□□□□ -0.39
NUDCD3-205ENST00000472246 CCT4P50991 539 aaKnown RBP12.58□□□□□ -0.4
NUDCD3-205ENST00000472246 CASP7P55210 303 aa12.58□□□□□ -0.4
NUDCD3-205ENST00000472246 NOGQ13253 232 aa12.58□□□□□ -0.4
NUDCD3-205ENST00000472246 SCARF1Q14162 830 aa12.58□□□□□ -0.4
NUDCD3-205ENST00000472246 GCKRQ14397 625 aa12.58□□□□□ -0.4
NUDCD3-205ENST00000472246 RGMBQ6NW40 437 aa12.58□□□□□ -0.4
NUDCD3-205ENST00000472246 PODNQ7Z5L7 613 aa12.58□□□□□ -0.4
NUDCD3-205ENST00000472246 SULF1Q8IWU6 871 aa12.58□□□□□ -0.4
NUDCD3-205ENST00000472246 C2orf69Q8N8R5 385 aa12.58□□□□□ -0.4
NUDCD3-205ENST00000472246 DNAAF4Q8WXU2 420 aa12.58□□□□□ -0.4
NUDCD3-205ENST00000472246 CDCA5Q96FF9 252 aa12.58□□□□□ -0.4
NUDCD3-205ENST00000472246 MXD3Q9BW11 206 aa12.58□□□□□ -0.4
NUDCD3-205ENST00000472246 SCAF8Q9UPN6 1271 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms