RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 FKBP1BP68106 108 aa24.97■■□□□ 1.59
SORT1-203ENST00000471996 NECTIN2Q92692 538 aa24.97■■□□□ 1.59
SORT1-203ENST00000471996 HDAC9Q9UKV0 1011 aa24.97■■□□□ 1.59
SORT1-203ENST00000471996 TAF1P21675 1872 aa24.96■■□□□ 1.59
SORT1-203ENST00000471996 TBC1D16Q8TBP0 767 aa24.96■■□□□ 1.59
SORT1-203ENST00000471996 ZNF296Q8WUU4 475 aaPredicted RBP24.96■■□□□ 1.59
SORT1-203ENST00000471996 ZNF428Q96B54 188 aa24.96■■□□□ 1.59
SORT1-203ENST00000471996 BABAM1Q9NWV8 329 aa24.96■■□□□ 1.59
SORT1-203ENST00000471996 MAPK8IP3Q9UPT6 1336 aa24.95■■□□□ 1.58
SORT1-203ENST00000471996 SCARF1Q14162 830 aa24.95■■□□□ 1.58
SORT1-203ENST00000471996 ANGEL2Q5VTE6 544 aaKnown RBP24.95■■□□□ 1.58
SORT1-203ENST00000471996 ZC3H12CQ9C0D7 883 aaKnown RBP24.95■■□□□ 1.58
SORT1-203ENST00000471996 PNNQ9H307 717 aaKnown RBP24.95■■□□□ 1.58
SORT1-203ENST00000471996 ZNF280AP59817 542 aaPredicted RBP24.94■■□□□ 1.58
SORT1-203ENST00000471996 FAM89AQ96GI7 184 aa24.94■■□□□ 1.58
SORT1-203ENST00000471996 TBC1D8O95759 1140 aa24.93■■□□□ 1.58
SORT1-203ENST00000471996 RPS8P62241 208 aaKnown RBP24.91■■□□□ 1.58
SORT1-203ENST00000471996 AGBL3Q8NEM8 1001 aa24.91■■□□□ 1.58
SORT1-203ENST00000471996 GCC1Q96CN9 775 aa24.91■■□□□ 1.58
SORT1-203ENST00000471996 ISCA1Q9BUE6 129 aa24.91■■□□□ 1.58
SORT1-203ENST00000471996 PODXL2Q9NZ53 605 aa24.91■■□□□ 1.58
SORT1-203ENST00000471996 ZNF609O15014 1411 aa24.9■■□□□ 1.58
SORT1-203ENST00000471996 NOM1Q5C9Z4 860 aaKnown RBP24.9■■□□□ 1.58
SORT1-203ENST00000471996 RSBN1LQ6PCB5 846 aaPredicted RBP24.9■■□□□ 1.58
SORT1-203ENST00000471996 FBXO46Q6PJ61 603 aaPredicted RBP24.9■■□□□ 1.58
SORT1-203ENST00000471996 PLBD2Q8NHP8 589 aa24.9■■□□□ 1.58
SORT1-203ENST00000471996 COL4A1P02462 1669 aa24.9■■□□□ 1.58
SORT1-203ENST00000471996 PITPNM2Q9BZ72 1349 aa24.89■■□□□ 1.58
SORT1-203ENST00000471996 G3V3G9 751 aa24.89■■□□□ 1.58
SORT1-203ENST00000471996 RIPK4P57078 832 aa24.89■■□□□ 1.58
SORT1-203ENST00000471996 DCAF8Q5TAQ9 597 aa24.89■■□□□ 1.58
SORT1-203ENST00000471996 MOB2Q70IA6 237 aa24.89■■□□□ 1.58
SORT1-203ENST00000471996 PAPPA2Q9BXP8 1791 aa24.89■■□□□ 1.57
SORT1-203ENST00000471996 DDX60Q8IY21 1712 aaKnown RBP24.89■■□□□ 1.57
SORT1-203ENST00000471996 GPR25O00155 361 aa24.88■■□□□ 1.57
SORT1-203ENST00000471996 TM4SF4P48230 202 aa24.88■■□□□ 1.57
SORT1-203ENST00000471996 ANKRD13DQ6ZTN6 518 aa24.88■■□□□ 1.57
SORT1-203ENST00000471996 ATP5J2-PTCD1G3V325 749 aa24.87■■□□□ 1.57
SORT1-203ENST00000471996 UBE2Q2LH0YL09 131 aa24.87■■□□□ 1.57
SORT1-203ENST00000471996 UFL1O94874 794 aa24.87■■□□□ 1.57
SORT1-203ENST00000471996 GMLQ99445 158 aa24.87■■□□□ 1.57
SORT1-203ENST00000471996 MYOZ2Q9NPC6 264 aa24.87■■□□□ 1.57
SORT1-203ENST00000471996 CHPF2Q9P2E5 772 aa24.87■■□□□ 1.57
SORT1-203ENST00000471996 SCN9AQ15858 1988 aa24.86■■□□□ 1.57
SORT1-203ENST00000471996 IRS4O14654 1257 aaPredicted RBP24.86■■□□□ 1.57
SORT1-203ENST00000471996 USP17L8P0C7I0 530 aa24.86■■□□□ 1.57
SORT1-203ENST00000471996 RTL5Q5HYW3 569 aaPredicted RBP24.86■■□□□ 1.57
SORT1-203ENST00000471996 ANKIB1Q9P2G1 1089 aa24.86■■□□□ 1.57
SORT1-203ENST00000471996 GGA1Q9UJY5 639 aa24.86■■□□□ 1.57
SORT1-203ENST00000471996 KRT24Q2M2I5 525 aa24.84■■□□□ 1.57
SORT1-203ENST00000471996 SCAF8Q9UPN6 1271 aaKnown RBP24.84■■□□□ 1.57
SORT1-203ENST00000471996 TRIM28Q13263 835 aaKnown RBP24.83■■□□□ 1.57
SORT1-203ENST00000471996 SEC31BQ9NQW1 1179 aa24.83■■□□□ 1.57
SORT1-203ENST00000471996 FKTNO75072 461 aa24.82■■□□□ 1.56
SORT1-203ENST00000471996 LMOD3Q0VAK6 560 aa24.82■■□□□ 1.56
SORT1-203ENST00000471996 PRAMEF18Q5VWM3 479 aa24.82■■□□□ 1.56
SORT1-203ENST00000471996 CFHR5Q9BXR6 569 aa24.82■■□□□ 1.56
SORT1-203ENST00000471996 TTLL12Q14166 644 aaPredicted RBP24.81■■□□□ 1.56
SORT1-203ENST00000471996 HABP4Q5JVS0 413 aaKnown RBP24.81■■□□□ 1.56
SORT1-203ENST00000471996 USP17L3A6NCW0 530 aa24.8■■□□□ 1.56
SORT1-203ENST00000471996 USP17L4A6NCW7 530 aa24.8■■□□□ 1.56
SORT1-203ENST00000471996 CHL1O00533 1208 aa24.8■■□□□ 1.56
SORT1-203ENST00000471996 TMPOP42166 694 aaKnown RBP24.8■■□□□ 1.56
SORT1-203ENST00000471996 SREBF2Q12772 1141 aa24.8■■□□□ 1.56
SORT1-203ENST00000471996 HDGFL1Q5TGJ6 251 aa24.8■■□□□ 1.56
SORT1-203ENST00000471996 USP17L1Q7RTZ2 530 aa24.8■■□□□ 1.56
SORT1-203ENST00000471996 MKRN3Q13064 507 aaKnown RBP24.79■■□□□ 1.56
SORT1-203ENST00000471996 NBPF9Q3BBW0 867 aa24.79■■□□□ 1.56
SORT1-203ENST00000471996 PODNQ7Z5L7 613 aa24.79■■□□□ 1.56
SORT1-203ENST00000471996 R3HDMLQ9H3Y0 253 aa24.79■■□□□ 1.56
SORT1-203ENST00000471996 DBF4Q9UBU7 674 aaPredicted RBP24.79■■□□□ 1.56
SORT1-203ENST00000471996 ZBTB38Q8NAP3 1195 aaPredicted RBP24.78■■□□□ 1.56
SORT1-203ENST00000471996 HSP90B1P14625 803 aaKnown RBP24.77■■□□□ 1.56
SORT1-203ENST00000471996 NF2P35240 595 aa24.77■■□□□ 1.56
SORT1-203ENST00000471996 HOXB7P09629 217 aa24.76■■□□□ 1.55
SORT1-203ENST00000471996 HYPKQ9NX55 129 aa24.76■■□□□ 1.55
SORT1-203ENST00000471996 XDHP47989 1333 aa24.76■■□□□ 1.55
SORT1-203ENST00000471996 PTPN12Q05209 780 aaKnown RBP24.75■■□□□ 1.55
SORT1-203ENST00000471996 CCDC152Q4G0S7 254 aa24.75■■□□□ 1.55
SORT1-203ENST00000471996 WNT10BO00744 389 aa24.74■■□□□ 1.55
SORT1-203ENST00000471996 ATP2B4P23634 1241 aa24.74■■□□□ 1.55
SORT1-203ENST00000471996 ALDH1A1P00352 501 aa24.73■■□□□ 1.55
SORT1-203ENST00000471996 INTS3Q68E01 1043 aaKnown RBP24.73■■□□□ 1.55
SORT1-203ENST00000471996 ARMC9Q7Z3E5 817 aa24.73■■□□□ 1.55
SORT1-203ENST00000471996 OGFOD1Q8N543 542 aa24.73■■□□□ 1.55
SORT1-203ENST00000471996 LAS1LQ9Y4W2 734 aaKnown RBP24.73■■□□□ 1.55
SORT1-203ENST00000471996 MKI67P46013 3256 aaKnown RBP24.73■■□□□ 1.55
SORT1-203ENST00000471996 PSME4Q14997 1843 aa24.72■■□□□ 1.55
SORT1-203ENST00000471996 POTEFA5A3E0 1075 aa24.71■■□□□ 1.55
SORT1-203ENST00000471996 PDE8AO60658 829 aa24.71■■□□□ 1.55
SORT1-203ENST00000471996 DACT2Q5SW24 774 aa24.71■■□□□ 1.55
SORT1-203ENST00000471996 LDLRAD1Q5T700 205 aa24.71■■□□□ 1.55
SORT1-203ENST00000471996 SPRYD7Q5W111 196 aa24.71■■□□□ 1.55
SORT1-203ENST00000471996 RIC3Q7Z5B4 369 aa24.71■■□□□ 1.55
SORT1-203ENST00000471996 ANKRD18AQ8IVF6 992 aa24.71■■□□□ 1.55
SORT1-203ENST00000471996 MXD3Q9BW11 206 aa24.71■■□□□ 1.55
SORT1-203ENST00000471996 TRIM17Q9Y577 477 aa24.71■■□□□ 1.55
SORT1-203ENST00000471996 NEUROD2Q15784 382 aa24.7■■□□□ 1.54
SORT1-203ENST00000471996 CCDC85AQ96PX6 553 aaPredicted RBP24.7■■□□□ 1.54
SORT1-203ENST00000471996 PCCAP05165 728 aaPredicted RBP24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms