RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 TRPM7Q96QT4 1865 aa14.72□□□□□ -0.05
COL4A3-205ENST00000471862 UBE3BQ7Z3V4 1068 aa14.72□□□□□ -0.05
COL4A3-205ENST00000471862 ANKRD18AQ8IVF6 992 aa14.72□□□□□ -0.05
COL4A3-205ENST00000471862 GREM2Q9H772 168 aa14.72□□□□□ -0.05
COL4A3-205ENST00000471862 DBNDD1Q9H9R9 158 aa14.72□□□□□ -0.05
COL4A3-205ENST00000471862 TMEM88BA6NKF7 163 aa14.71□□□□□ -0.05
COL4A3-205ENST00000471862 RIMBP2O15034 1052 aa14.71□□□□□ -0.05
COL4A3-205ENST00000471862 ECE2O60344 883 aa14.71□□□□□ -0.05
COL4A3-205ENST00000471862 CDC5LQ99459 802 aaKnown RBP14.71□□□□□ -0.05
COL4A3-205ENST00000471862 GGA1Q9UJY5 639 aa14.71□□□□□ -0.05
COL4A3-205ENST00000471862 CNTNAP1P78357 1384 aa14.71□□□□□ -0.06
COL4A3-205ENST00000471862 XDHP47989 1333 aa14.7□□□□□ -0.06
COL4A3-205ENST00000471862 F6X3S4 739 aa14.7□□□□□ -0.06
COL4A3-205ENST00000471862 PSMD14O00487 310 aa14.7□□□□□ -0.06
COL4A3-205ENST00000471862 UFL1O94874 794 aa14.7□□□□□ -0.06
COL4A3-205ENST00000471862 CSF1RP07333 972 aa14.7□□□□□ -0.06
COL4A3-205ENST00000471862 BEND3Q5T5X7 828 aa14.7□□□□□ -0.06
COL4A3-205ENST00000471862 BSDC1Q9NW68 430 aaPredicted RBP14.7□□□□□ -0.06
COL4A3-205ENST00000471862 PGAP2Q9UHJ9 254 aa14.7□□□□□ -0.06
COL4A3-205ENST00000471862 ZNF646O15015 1829 aaPredicted RBP14.69□□□□□ -0.06
COL4A3-205ENST00000471862 ZNF609O15014 1411 aa14.69□□□□□ -0.06
COL4A3-205ENST00000471862 SHTN1A0MZ66 631 aa14.69□□□□□ -0.06
COL4A3-205ENST00000471862 HIRAP54198 1017 aaPredicted RBP14.69□□□□□ -0.06
COL4A3-205ENST00000471862 DOK7Q18PE1 504 aa14.69□□□□□ -0.06
COL4A3-205ENST00000471862 TRPM4Q8TD43 1214 aa14.69□□□□□ -0.06
COL4A3-205ENST00000471862 DPF2Q92785 391 aa14.69□□□□□ -0.06
COL4A3-205ENST00000471862 BCL2L13Q9BXK5 485 aa14.69□□□□□ -0.06
COL4A3-205ENST00000471862 ZC3H12CQ9C0D7 883 aaKnown RBP14.69□□□□□ -0.06
COL4A3-205ENST00000471862 KCNQ5Q9NR82 932 aa14.69□□□□□ -0.06
COL4A3-205ENST00000471862 ANKIB1Q9P2G1 1089 aa14.69□□□□□ -0.06
COL4A3-205ENST00000471862 MKRN1Q9UHC7 482 aaKnown RBP14.69□□□□□ -0.06
COL4A3-205ENST00000471862 MINPP1Q9UNW1 487 aa14.69□□□□□ -0.06
COL4A3-205ENST00000471862 ZBTB12Q9Y330 459 aaPredicted RBP14.69□□□□□ -0.06
COL4A3-205ENST00000471862 A0A1B0GUL6 1792 aa14.68□□□□□ -0.06
COL4A3-205ENST00000471862 ATP2B4P23634 1241 aa14.68□□□□□ -0.06
COL4A3-205ENST00000471862 FMR1Q06787 632 aaKnown RBP eCLIP14.68□□□□□ -0.06
COL4A3-205ENST00000471862 CNOT7Q9UIV1 285 aaKnown RBP14.68□□□□□ -0.06
COL4A3-205ENST00000471862 E9PSI1 815 aa14.67□□□□□ -0.06
COL4A3-205ENST00000471862 VIL1P09327 827 aaKnown RBP14.67□□□□□ -0.06
COL4A3-205ENST00000471862 ITGA6P23229 1130 aa14.67□□□□□ -0.06
COL4A3-205ENST00000471862 RPS12P25398 132 aaKnown RBP14.67□□□□□ -0.06
COL4A3-205ENST00000471862 FAM161AQ3B820 660 aa14.67□□□□□ -0.06
COL4A3-205ENST00000471862 MICALL2Q8IY33 904 aa14.67□□□□□ -0.06
COL4A3-205ENST00000471862 ZC3H15Q8WU90 426 aaKnown RBP14.67□□□□□ -0.06
COL4A3-205ENST00000471862 MED23Q9ULK4 1368 aa14.67□□□□□ -0.06
COL4A3-205ENST00000471862 WTIPA6NIX2 430 aaPredicted RBP14.66□□□□□ -0.06
COL4A3-205ENST00000471862 RASSF10A6NK89 507 aa14.66□□□□□ -0.06
COL4A3-205ENST00000471862 CCER2I3L3R5 266 aa14.66□□□□□ -0.06
COL4A3-205ENST00000471862 FOXO4P98177 505 aa14.66□□□□□ -0.06
COL4A3-205ENST00000471862 SLFN5Q08AF3 891 aa14.66□□□□□ -0.06
COL4A3-205ENST00000471862 POLR2AP24928 1970 aaKnown RBP14.65□□□□□ -0.06
COL4A3-205ENST00000471862 H7C1D1 291 aa14.65□□□□□ -0.06
COL4A3-205ENST00000471862 TRAF5O00463 557 aa14.65□□□□□ -0.06
COL4A3-205ENST00000471862 HSPA1AP0DMV8 641 aaKnown RBP14.65□□□□□ -0.06
COL4A3-205ENST00000471862 HSPA1BP0DMV9 641 aaKnown RBP14.65□□□□□ -0.06
COL4A3-205ENST00000471862 IGHMBP2P38935 993 aaKnown RBP14.65□□□□□ -0.06
COL4A3-205ENST00000471862 CCT4P50991 539 aaKnown RBP14.65□□□□□ -0.06
COL4A3-205ENST00000471862 MRPL50Q8N5N7 158 aaKnown RBP14.65□□□□□ -0.06
COL4A3-205ENST00000471862 THSD7BQ9C0I4 1608 aa14.64□□□□□ -0.07
COL4A3-205ENST00000471862 GRM8O00222 908 aa14.64□□□□□ -0.07
COL4A3-205ENST00000471862 ALDH1L1O75891 902 aa14.64□□□□□ -0.07
COL4A3-205ENST00000471862 EGFRP00533 1210 aa14.64□□□□□ -0.07
COL4A3-205ENST00000471862 VEGFBP49765 207 aa14.64□□□□□ -0.07
COL4A3-205ENST00000471862 CST9Q5W186 159 aa14.64□□□□□ -0.07
COL4A3-205ENST00000471862 TRMT2AQ8IZ69 625 aaKnown RBP14.64□□□□□ -0.07
COL4A3-205ENST00000471862 DEFB115Q30KQ5 88 aa14.63□□□□□ -0.07
COL4A3-205ENST00000471862 EPHA10Q5JZY3 1008 aa14.63□□□□□ -0.07
COL4A3-205ENST00000471862 RSBN1LQ6PCB5 846 aaPredicted RBP14.63□□□□□ -0.07
COL4A3-205ENST00000471862 SAMD7Q7Z3H4 446 aa14.63□□□□□ -0.07
COL4A3-205ENST00000471862 PODNQ7Z5L7 613 aa14.63□□□□□ -0.07
COL4A3-205ENST00000471862 GMLQ99445 158 aa14.63□□□□□ -0.07
COL4A3-205ENST00000471862 GLIS2Q9BZE0 524 aaPredicted RBP14.63□□□□□ -0.07
COL4A3-205ENST00000471862 LEMD3Q9Y2U8 911 aa14.63□□□□□ -0.07
COL4A3-205ENST00000471862 ANKRD18BA2A2Z9 1011 aa14.62□□□□□ -0.07
COL4A3-205ENST00000471862 G3V3G9 751 aa14.62□□□□□ -0.07
COL4A3-205ENST00000471862 TBC1D10BQ4KMP7 808 aaPredicted RBP14.62□□□□□ -0.07
COL4A3-205ENST00000471862 DCAF8Q5TAQ9 597 aa14.62□□□□□ -0.07
COL4A3-205ENST00000471862 TXNRD3Q86VQ6 643 aa14.62□□□□□ -0.07
COL4A3-205ENST00000471862 AGBL3Q8NEM8 1001 aa14.62□□□□□ -0.07
COL4A3-205ENST00000471862 CDCA7LQ96GN5 454 aa14.62□□□□□ -0.07
COL4A3-205ENST00000471862 MPHOSPH8Q99549 860 aa14.62□□□□□ -0.07
COL4A3-205ENST00000471862 SRCIN1Q9C0H9 1055 aa14.62□□□□□ -0.07
COL4A3-205ENST00000471862 ANKRD2Q9GZV1 360 aa14.62□□□□□ -0.07
COL4A3-205ENST00000471862 IRS2Q9Y4H2 1338 aa14.62□□□□□ -0.07
COL4A3-205ENST00000471862 ZNF280AP59817 542 aaPredicted RBP14.61□□□□□ -0.07
COL4A3-205ENST00000471862 CHRNDQ07001 517 aa14.61□□□□□ -0.07
COL4A3-205ENST00000471862 IFFO2Q5TF58 517 aa14.61□□□□□ -0.07
COL4A3-205ENST00000471862 SLC4A10Q6U841 1118 aa14.61□□□□□ -0.07
COL4A3-205ENST00000471862 LMBR1LQ6UX01 489 aa14.61□□□□□ -0.07
COL4A3-205ENST00000471862 CDC37L1Q7L3B6 337 aa14.61□□□□□ -0.07
COL4A3-205ENST00000471862 SSH1Q8WYL5 1049 aa14.61□□□□□ -0.07
COL4A3-205ENST00000471862 KAZALD1Q96I82 304 aa14.61□□□□□ -0.07
COL4A3-205ENST00000471862 ABT1Q9ULW3 272 aaKnown RBP14.61□□□□□ -0.07
COL4A3-205ENST00000471862 TLL2Q9Y6L7 1015 aa14.61□□□□□ -0.07
COL4A3-205ENST00000471862 ZNF804BA4D1E1 1349 aa14.61□□□□□ -0.07
COL4A3-205ENST00000471862 UTYO14607 1347 aa14.61□□□□□ -0.07
COL4A3-205ENST00000471862 PTPRCP08575 1304 aa14.61□□□□□ -0.07
COL4A3-205ENST00000471862 USP17L3A6NCW0 530 aa14.6□□□□□ -0.07
COL4A3-205ENST00000471862 USP17L4A6NCW7 530 aa14.6□□□□□ -0.07
COL4A3-205ENST00000471862 KLRK1P26718 216 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms