RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 TRPA1O75762 1119 aa25.91■■□□□ 1.74
CCDC78-208ENST00000471861 KIF4BQ2VIQ3 1234 aa25.91■■□□□ 1.74
CCDC78-208ENST00000471861 PCDH10Q9P2E7 1040 aa25.91■■□□□ 1.74
CCDC78-208ENST00000471861 PLBD2Q8NHP8 589 aa25.9■■□□□ 1.74
CCDC78-208ENST00000471861 TBC1D16Q8TBP0 767 aa25.9■■□□□ 1.74
CCDC78-208ENST00000471861 ATP5J2-PTCD1G3V325 749 aa25.89■■□□□ 1.74
CCDC78-208ENST00000471861 CSRNP1Q96S65 589 aa25.89■■□□□ 1.74
CCDC78-208ENST00000471861 CHL1O00533 1208 aa25.88■■□□□ 1.73
CCDC78-208ENST00000471861 VIL1P09327 827 aaKnown RBP25.88■■□□□ 1.73
CCDC78-208ENST00000471861 RTL5Q5HYW3 569 aaPredicted RBP25.88■■□□□ 1.73
CCDC78-208ENST00000471861 AKAP11Q9UKA4 1901 aa25.87■■□□□ 1.73
CCDC78-208ENST00000471861 LMOD3Q0VAK6 560 aa25.87■■□□□ 1.73
CCDC78-208ENST00000471861 CDCA5Q96FF9 252 aa25.87■■□□□ 1.73
CCDC78-208ENST00000471861 EYA3Q99504 573 aa25.87■■□□□ 1.73
CCDC78-208ENST00000471861 ZNF609O15014 1411 aa25.87■■□□□ 1.73
CCDC78-208ENST00000471861 HDGFL1Q5TGJ6 251 aa25.86■■□□□ 1.73
CCDC78-208ENST00000471861 ANKRD13DQ6ZTN6 518 aa25.86■■□□□ 1.73
CCDC78-208ENST00000471861 RASAL3Q86YV0 1011 aa25.86■■□□□ 1.73
CCDC78-208ENST00000471861 SULF1Q8IWU6 871 aa25.85■■□□□ 1.73
CCDC78-208ENST00000471861 RPS8P62241 208 aaKnown RBP25.84■■□□□ 1.73
CCDC78-208ENST00000471861 PODXL2Q9NZ53 605 aa25.84■■□□□ 1.73
CCDC78-208ENST00000471861 PAPPA2Q9BXP8 1791 aa25.83■■□□□ 1.73
CCDC78-208ENST00000471861 IRS4O14654 1257 aaPredicted RBP25.83■■□□□ 1.73
CCDC78-208ENST00000471861 ZNF280AP59817 542 aaPredicted RBP25.83■■□□□ 1.73
CCDC78-208ENST00000471861 SEC31BQ9NQW1 1179 aa25.83■■□□□ 1.73
CCDC78-208ENST00000471861 TRIM35Q9UPQ4 493 aa25.83■■□□□ 1.73
CCDC78-208ENST00000471861 PSME4Q14997 1843 aa25.83■■□□□ 1.73
CCDC78-208ENST00000471861 ANGEL2Q5VTE6 544 aaKnown RBP25.82■■□□□ 1.72
CCDC78-208ENST00000471861 CTU1Q7Z7A3 348 aaKnown RBP25.82■■□□□ 1.72
CCDC78-208ENST00000471861 UFL1O94874 794 aa25.81■■□□□ 1.72
CCDC78-208ENST00000471861 HOXB7P09629 217 aa25.81■■□□□ 1.72
CCDC78-208ENST00000471861 TRIM28Q13263 835 aaKnown RBP25.81■■□□□ 1.72
CCDC78-208ENST00000471861 NEUROD2Q15784 382 aa25.81■■□□□ 1.72
CCDC78-208ENST00000471861 CCDC146Q8IYE0 955 aa25.81■■□□□ 1.72
CCDC78-208ENST00000471861 ZC3H12CQ9C0D7 883 aaKnown RBP25.81■■□□□ 1.72
CCDC78-208ENST00000471861 DBF4Q9UBU7 674 aaPredicted RBP25.81■■□□□ 1.72
CCDC78-208ENST00000471861 LAS1LQ9Y4W2 734 aaKnown RBP25.81■■□□□ 1.72
CCDC78-208ENST00000471861 SCARF1Q14162 830 aa25.8■■□□□ 1.72
CCDC78-208ENST00000471861 RSBN1LQ6PCB5 846 aaPredicted RBP25.79■■□□□ 1.72
CCDC78-208ENST00000471861 GMLQ99445 158 aa25.79■■□□□ 1.72
CCDC78-208ENST00000471861 MOB2Q70IA6 237 aa25.78■■□□□ 1.72
CCDC78-208ENST00000471861 AGBL3Q8NEM8 1001 aa25.78■■□□□ 1.72
CCDC78-208ENST00000471861 SCAF8Q9UPN6 1271 aaKnown RBP25.78■■□□□ 1.72
CCDC78-208ENST00000471861 GGA1Q9UJY5 639 aa25.77■■□□□ 1.72
CCDC78-208ENST00000471861 HPS5Q9UPZ3 1129 aa25.77■■□□□ 1.72
CCDC78-208ENST00000471861 ZBTB38Q8NAP3 1195 aaPredicted RBP25.76■■□□□ 1.71
CCDC78-208ENST00000471861 HYPKQ9NX55 129 aa25.76■■□□□ 1.71
CCDC78-208ENST00000471861 ANKIB1Q9P2G1 1089 aa25.76■■□□□ 1.71
CCDC78-208ENST00000471861 ZNF646O15015 1829 aaPredicted RBP25.75■■□□□ 1.71
CCDC78-208ENST00000471861 PITPNM2Q9BZ72 1349 aa25.75■■□□□ 1.71
CCDC78-208ENST00000471861 FKBP1BP68106 108 aa25.75■■□□□ 1.71
CCDC78-208ENST00000471861 PRPF38BQ5VTL8 546 aaKnown RBP25.75■■□□□ 1.71
CCDC78-208ENST00000471861 MYOZ2Q9NPC6 264 aa25.75■■□□□ 1.71
CCDC78-208ENST00000471861 DUSP27Q5VZP5 1158 aa25.74■■□□□ 1.71
CCDC78-208ENST00000471861 REM2Q8IYK8 340 aaPredicted RBP25.74■■□□□ 1.71
CCDC78-208ENST00000471861 WTIPA6NIX2 430 aaPredicted RBP25.72■■□□□ 1.71
CCDC78-208ENST00000471861 G3V3G9 751 aa25.72■■□□□ 1.71
CCDC78-208ENST00000471861 USP17L8P0C7I0 530 aa25.72■■□□□ 1.71
CCDC78-208ENST00000471861 DCAF8Q5TAQ9 597 aa25.72■■□□□ 1.71
CCDC78-208ENST00000471861 PRAMEF18Q5VWM3 479 aa25.72■■□□□ 1.71
CCDC78-208ENST00000471861 ZNF296Q8WUU4 475 aaPredicted RBP25.72■■□□□ 1.71
CCDC78-208ENST00000471861 CCDC85AQ96PX6 553 aaPredicted RBP25.72■■□□□ 1.71
CCDC78-208ENST00000471861 PHAXQ9H814 394 aaKnown RBP25.72■■□□□ 1.71
CCDC78-208ENST00000471861 TBC1D8O95759 1140 aa25.71■■□□□ 1.71
CCDC78-208ENST00000471861 JARID2Q92833 1246 aaPredicted RBP25.71■■□□□ 1.71
CCDC78-208ENST00000471861 XDHP47989 1333 aa25.7■■□□□ 1.71
CCDC78-208ENST00000471861 UBE2Q2LH0YL09 131 aa25.7■■□□□ 1.7
CCDC78-208ENST00000471861 RALBP1Q15311 655 aa25.7■■□□□ 1.7
CCDC78-208ENST00000471861 CCDC152Q4G0S7 254 aa25.7■■□□□ 1.7
CCDC78-208ENST00000471861 RIC3Q7Z5B4 369 aa25.7■■□□□ 1.7
CCDC78-208ENST00000471861 MYD88Q99836 296 aa25.7■■□□□ 1.7
CCDC78-208ENST00000471861 MBIPQ9NS73 344 aa25.7■■□□□ 1.7
CCDC78-208ENST00000471861 PCCAP05165 728 aaPredicted RBP25.69■■□□□ 1.7
CCDC78-208ENST00000471861 NBPF9Q3BBW0 867 aa25.69■■□□□ 1.7
CCDC78-208ENST00000471861 RUNDC1Q96C34 613 aa25.69■■□□□ 1.7
CCDC78-208ENST00000471861 USP17L3A6NCW0 530 aa25.68■■□□□ 1.7
CCDC78-208ENST00000471861 USP17L4A6NCW7 530 aa25.68■■□□□ 1.7
CCDC78-208ENST00000471861 PDE8AO60658 829 aa25.68■■□□□ 1.7
CCDC78-208ENST00000471861 GOLGA2Q08379 1002 aa25.68■■□□□ 1.7
CCDC78-208ENST00000471861 USP17L1Q7RTZ2 530 aa25.68■■□□□ 1.7
CCDC78-208ENST00000471861 MXD3Q9BW11 206 aa25.68■■□□□ 1.7
CCDC78-208ENST00000471861 PKN2Q16513 984 aaKnown RBP25.67■■□□□ 1.7
CCDC78-208ENST00000471861 PODNQ7Z5L7 613 aa25.67■■□□□ 1.7
CCDC78-208ENST00000471861 CCDC191Q8NCU4 936 aa25.66■■□□□ 1.7
CCDC78-208ENST00000471861 HDAC9Q9UKV0 1011 aa25.66■■□□□ 1.7
CCDC78-208ENST00000471861 ZNF853P0CG23 659 aa25.65■■□□□ 1.7
CCDC78-208ENST00000471861 ATP2B4P23634 1241 aa25.65■■□□□ 1.7
CCDC78-208ENST00000471861 TM4SF4P48230 202 aa25.65■■□□□ 1.7
CCDC78-208ENST00000471861 DACT2Q5SW24 774 aa25.65■■□□□ 1.7
CCDC78-208ENST00000471861 ANKRD18AQ8IVF6 992 aa25.65■■□□□ 1.7
CCDC78-208ENST00000471861 MED23Q9ULK4 1368 aa25.65■■□□□ 1.7
CCDC78-208ENST00000471861 HTTP42858 3142 aa25.64■■□□□ 1.7
CCDC78-208ENST00000471861 GPR25O00155 361 aa25.64■■□□□ 1.7
CCDC78-208ENST00000471861 HSP90B1P14625 803 aaKnown RBP25.64■■□□□ 1.7
CCDC78-208ENST00000471861 MKRN3Q13064 507 aaKnown RBP25.64■■□□□ 1.7
CCDC78-208ENST00000471861 CWC25Q9NXE8 425 aaPredicted RBP25.64■■□□□ 1.7
CCDC78-208ENST00000471861 MYBBP1AQ9BQG0 1328 aaKnown RBP25.63■■□□□ 1.69
CCDC78-208ENST00000471861 SPEF2Q9C093 1822 aa25.63■■□□□ 1.69
CCDC78-208ENST00000471861 WNT10BO00744 389 aa25.63■■□□□ 1.69
CCDC78-208ENST00000471861 NOM1Q5C9Z4 860 aaKnown RBP25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms