RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 FAM196AQ6ZSG2 479 aa9.85□□□□□ -0.83
CD47-204ENST00000471694 SPC24Q8NBT2 197 aa9.85□□□□□ -0.83
CD47-204ENST00000471694 CPLX3Q8WVH0 158 aa9.85□□□□□ -0.83
CD47-204ENST00000471694 DHX29Q7Z478 1369 aaKnown RBP9.85□□□□□ -0.83
CD47-204ENST00000471694 TNFAIP1Q13829 316 aa9.84□□□□□ -0.83
CD47-204ENST00000471694 MAGEB6Q8N7X4 407 aa9.84□□□□□ -0.83
CD47-204ENST00000471694 MIGA1Q8NAN2 632 aa9.84□□□□□ -0.83
CD47-204ENST00000471694 NCOA7Q8NI08 942 aa9.84□□□□□ -0.83
CD47-204ENST00000471694 CEP83Q9Y592 693 aa9.84□□□□□ -0.83
CD47-204ENST00000471694 WDR33Q9C0J8 1336 aaKnown RBP9.84□□□□□ -0.83
CD47-204ENST00000471694 PRKCSHP14314 528 aaPredicted RBP9.84□□□□□ -0.83
CD47-204ENST00000471694 MTIF2P46199 727 aaKnown RBP9.84□□□□□ -0.83
CD47-204ENST00000471694 TAF3Q5VWG9 929 aa9.84□□□□□ -0.83
CD47-204ENST00000471694 IQCEQ6IPM2 695 aa9.84□□□□□ -0.83
CD47-204ENST00000471694 AZI2Q9H6S1 392 aa9.84□□□□□ -0.83
CD47-204ENST00000471694 FERP16591 822 aa9.84□□□□□ -0.83
CD47-204ENST00000471694 HACE1Q8IYU2 909 aa9.84□□□□□ -0.83
CD47-204ENST00000471694 CCDC148Q8NFR7 591 aa9.84□□□□□ -0.83
CD47-204ENST00000471694 TBC1D5Q92609 795 aa9.84□□□□□ -0.83
CD47-204ENST00000471694 GOLGA1Q92805 767 aa9.84□□□□□ -0.83
CD47-204ENST00000471694 DCAF5Q96JK2 942 aa9.84□□□□□ -0.83
CD47-204ENST00000471694 MRVI1Q9Y6F6 885 aa9.84□□□□□ -0.83
CD47-204ENST00000471694 SMTNL1A8MU46 457 aa9.84□□□□□ -0.83
CD47-204ENST00000471694 FAM13AO94988 1023 aa9.84□□□□□ -0.83
CD47-204ENST00000471694 IARSP41252 1262 aaKnown RBP9.84□□□□□ -0.83
CD47-204ENST00000471694 UBA7P41226 1012 aa9.84□□□□□ -0.83
CD47-204ENST00000471694 GNAQP50148 359 aa9.84□□□□□ -0.83
CD47-204ENST00000471694 SMC1AQ14683 1233 aaKnown RBP9.84□□□□□ -0.83
CD47-204ENST00000471694 SLU7O95391 586 aaKnown RBP9.83□□□□□ -0.84
CD47-204ENST00000471694 DNA2P51530 1060 aa9.83□□□□□ -0.84
CD47-204ENST00000471694 CCDC83Q8IWF9 413 aa9.83□□□□□ -0.84
CD47-204ENST00000471694 TMEM57Q8N5G2 664 aa9.83□□□□□ -0.84
CD47-204ENST00000471694 NCOA1Q15788 1441 aa9.83□□□□□ -0.84
CD47-204ENST00000471694 ANO3Q9BYT9 981 aa9.83□□□□□ -0.84
CD47-204ENST00000471694 SLC8A3P57103 927 aa9.83□□□□□ -0.84
CD47-204ENST00000471694 GPCPD1Q9NPB8 672 aa9.83□□□□□ -0.84
CD47-204ENST00000471694 EXOC1Q9NV70 894 aa9.83□□□□□ -0.84
CD47-204ENST00000471694 ZNF608Q9ULD9 1512 aaPredicted RBP9.83□□□□□ -0.84
CD47-204ENST00000471694 HIBADHP31937 336 aaKnown RBP9.83□□□□□ -0.84
CD47-204ENST00000471694 EVI5LQ96CN4 794 aa9.83□□□□□ -0.84
CD47-204ENST00000471694 DENND2AQ9ULE3 1009 aa9.83□□□□□ -0.84
CD47-204ENST00000471694 CCDC192P0DO97 292 aa9.83□□□□□ -0.84
CD47-204ENST00000471694 FAM193AP78312 1265 aa9.83□□□□□ -0.84
CD47-204ENST00000471694 CPXCR1Q8N123 301 aa9.83□□□□□ -0.84
CD47-204ENST00000471694 CCDC113Q9H0I3 377 aa9.83□□□□□ -0.84
CD47-204ENST00000471694 ZEB2O60315 1214 aa9.82□□□□□ -0.84
CD47-204ENST00000471694 ZNF771Q7L3S4 317 aaPredicted RBP9.82□□□□□ -0.84
CD47-204ENST00000471694 FNBP4Q8N3X1 1017 aaPredicted RBP9.82□□□□□ -0.84
CD47-204ENST00000471694 ARHGEF10O15013 1369 aa9.82□□□□□ -0.84
CD47-204ENST00000471694 A2MP01023 1474 aa9.82□□□□□ -0.84
CD47-204ENST00000471694 ZNF518AQ6AHZ1 1483 aa9.82□□□□□ -0.84
CD47-204ENST00000471694 DCAF15Q66K64 600 aa9.82□□□□□ -0.84
CD47-204ENST00000471694 CAVIN1Q6NZI2 390 aaKnown RBP9.82□□□□□ -0.84
CD47-204ENST00000471694 UPF3BQ9BZI7 483 aaKnown RBP9.82□□□□□ -0.84
CD47-204ENST00000471694 USP16Q9Y5T5 823 aa9.82□□□□□ -0.84
CD47-204ENST00000471694 OSBPP22059 807 aa9.82□□□□□ -0.84
CD47-204ENST00000471694 PARP10Q53GL7 1025 aa9.82□□□□□ -0.84
CD47-204ENST00000471694 LMBR1LQ6UX01 489 aa9.82□□□□□ -0.84
CD47-204ENST00000471694 HAUS7Q99871 368 aa9.82□□□□□ -0.84
CD47-204ENST00000471694 CNNM2Q9H8M5 875 aa9.82□□□□□ -0.84
CD47-204ENST00000471694 LRFN2Q9ULH4 789 aa9.82□□□□□ -0.84
CD47-204ENST00000471694 PALM3A6NDB9 673 aaPredicted RBP9.82□□□□□ -0.84
CD47-204ENST00000471694 CAPN15O75808 1086 aa9.82□□□□□ -0.84
CD47-204ENST00000471694 NCAPG2Q86XI2 1143 aa9.82□□□□□ -0.84
CD47-204ENST00000471694 HCLS1P14317 486 aaPredicted RBP9.81□□□□□ -0.84
CD47-204ENST00000471694 DNM2P50570 870 aa9.81□□□□□ -0.84
CD47-204ENST00000471694 TCP10L2B9ZVM9 353 aa9.81□□□□□ -0.84
CD47-204ENST00000471694 NDC80O14777 642 aa9.81□□□□□ -0.84
CD47-204ENST00000471694 NBPF7P0C2Y1 421 aaPredicted RBP9.81□□□□□ -0.84
CD47-204ENST00000471694 DALRD3Q5D0E6 543 aaKnown RBP9.81□□□□□ -0.84
CD47-204ENST00000471694 SLC9C2Q5TAH2 1124 aa9.81□□□□□ -0.84
CD47-204ENST00000471694 DPP9Q86TI2 863 aa9.81□□□□□ -0.84
CD47-204ENST00000471694 ZBED2Q9BTP6 218 aa9.81□□□□□ -0.84
CD47-204ENST00000471694 TMEM106CQ9BVX2 250 aa9.81□□□□□ -0.84
CD47-204ENST00000471694 WDR62O43379 1518 aa9.81□□□□□ -0.84
CD47-204ENST00000471694 PTPRCP08575 1304 aa9.81□□□□□ -0.84
CD47-204ENST00000471694 GABPAQ06546 454 aa9.81□□□□□ -0.84
CD47-204ENST00000471694 FAM83GA6ND36 823 aa9.81□□□□□ -0.84
CD47-204ENST00000471694 CNKSR1Q969H4 720 aa9.81□□□□□ -0.84
CD47-204ENST00000471694 MSANTD4Q8NCY6 345 aa9.81□□□□□ -0.84
CD47-204ENST00000471694 TSPYL1Q9H0U9 437 aa9.81□□□□□ -0.84
CD47-204ENST00000471694 H0YHG0 523 aa9.8□□□□□ -0.84
CD47-204ENST00000471694 PARP1P09874 1014 aaKnown RBP9.8□□□□□ -0.84
CD47-204ENST00000471694 FCHSD1Q86WN1 690 aa9.8□□□□□ -0.84
CD47-204ENST00000471694 GJC1P36383 396 aa9.8□□□□□ -0.84
CD47-204ENST00000471694 CNNM3Q8NE01 707 aa9.8□□□□□ -0.84
CD47-204ENST00000471694 ORAI2Q96SN7 254 aa9.8□□□□□ -0.84
CD47-204ENST00000471694 MBD3O95983 291 aa9.8□□□□□ -0.84
CD47-204ENST00000471694 PRPF4BQ13523 1007 aaKnown RBP9.8□□□□□ -0.84
CD47-204ENST00000471694 CFAP58Q5T655 872 aa9.8□□□□□ -0.84
CD47-204ENST00000471694 CDAN1Q8IWY9 1227 aa9.8□□□□□ -0.84
CD47-204ENST00000471694 CHMP2AO43633 222 aa9.8□□□□□ -0.84
CD47-204ENST00000471694 RTN1Q16799 776 aa9.8□□□□□ -0.84
CD47-204ENST00000471694 CFAP100Q494V2 611 aa9.8□□□□□ -0.84
CD47-204ENST00000471694 TTC30AQ86WT1 665 aa9.8□□□□□ -0.84
CD47-204ENST00000471694 C2orf69Q8N8R5 385 aa9.8□□□□□ -0.84
CD47-204ENST00000471694 PLCD4Q9BRC7 762 aa9.8□□□□□ -0.84
CD47-204ENST00000471694 TMCO5BA8MYB1 307 aa9.8□□□□□ -0.84
CD47-204ENST00000471694 FMNL1O95466 1100 aaPredicted RBP9.8□□□□□ -0.84
CD47-204ENST00000471694 GNAT2P19087 354 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms