RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 PLS1Q14651 629 aa7.81□□□□□ -1.16
BRCA1-210ENST00000471181 PROSER2Q86WR7 435 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-210ENST00000471181 SCAND2PQ9GZW5 306 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-210ENST00000471181 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.81□□□□□ -1.164e-6■■□□□ 13.9
BRCA1-210ENST00000471181 POLA1P09884 1462 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-210ENST00000471181 CYLC1P35663 651 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-210ENST00000471181 CDR2Q01850 454 aa7.81□□□□□ -1.16
BRCA1-210ENST00000471181 NCBP1Q09161 790 aaKnown RBP7.81□□□□□ -1.16
BRCA1-210ENST00000471181 MAP3K12Q12852 859 aa7.81□□□□□ -1.16
BRCA1-210ENST00000471181 CLUL1Q15846 466 aa7.81□□□□□ -1.16
BRCA1-210ENST00000471181 RUFY3Q7L099 469 aa7.81□□□□□ -1.16
BRCA1-210ENST00000471181 KIFC2Q96AC6 838 aa7.81□□□□□ -1.16
BRCA1-210ENST00000471181 TRIM6Q9C030 488 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-210ENST00000471181 BOLA2Q9H3K6 86 aa7.81□□□□□ -1.16
BRCA1-210ENST00000471181 ATP6V0A2Q9Y487 856 aa7.81□□□□□ -1.16
BRCA1-210ENST00000471181 RPGRIP1LQ68CZ1 1315 aa7.81□□□□□ -1.16
BRCA1-210ENST00000471181 CTTNBP2Q8WZ74 1663 aa7.81□□□□□ -1.16
BRCA1-210ENST00000471181 ADAMTS12P58397 1594 aa7.81□□□□□ -1.16
BRCA1-210ENST00000471181 HGSO14964 777 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-210ENST00000471181 BUB1BO60566 1050 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-210ENST00000471181 ADCY5O95622 1261 aa7.81□□□□□ -1.16
BRCA1-210ENST00000471181 ATXN8OSP0DMR3 200 aa7.81□□□□□ -1.16
BRCA1-210ENST00000471181 UBA7P41226 1012 aa7.81□□□□□ -1.16
BRCA1-210ENST00000471181 AFMP43652 599 aa7.81□□□□□ -1.16
BRCA1-210ENST00000471181 FYB2Q5VWT5 728 aa7.81□□□□□ -1.16
BRCA1-210ENST00000471181 SLF2Q8IX21 1173 aa7.81□□□□□ -1.16
BRCA1-210ENST00000471181 KRT222Q8N1A0 295 aa7.81□□□□□ -1.16
BRCA1-210ENST00000471181 ANKRD24Q8TF21 1146 aa7.81□□□□□ -1.16
BRCA1-210ENST00000471181 TBC1D31Q96DN5 1066 aa7.81□□□□□ -1.16
BRCA1-210ENST00000471181 CIZ1Q9ULV3 898 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-210ENST00000471181 LRRIQ1Q96JM4 1722 aa7.81□□□□□ -1.16
BRCA1-210ENST00000471181 CUL7Q14999 1698 aa7.81□□□□□ -1.16
BRCA1-210ENST00000471181 SLC5A1P13866 664 aa7.8□□□□□ -1.16
BRCA1-210ENST00000471181 MCM7P33993 719 aa7.8□□□□□ -1.16
BRCA1-210ENST00000471181 ZNF710Q8N1W2 664 aa7.8□□□□□ -1.16
BRCA1-210ENST00000471181 ERMNQ8TAM6 284 aa7.8□□□□□ -1.16
BRCA1-210ENST00000471181 CLNS1AP54105 237 aaKnown RBP7.8□□□□□ -1.16
BRCA1-210ENST00000471181 INF2Q27J81 1249 aa7.8□□□□□ -1.16
BRCA1-210ENST00000471181 PPP4R4Q6NUP7 873 aa7.8□□□□□ -1.16
BRCA1-210ENST00000471181 XAB2Q9HCS7 855 aaKnown RBP7.8□□□□□ -1.16
BRCA1-210ENST00000471181 ZNF652Q9Y2D9 606 aa7.8□□□□□ -1.16
BRCA1-210ENST00000471181 GNL1P36915 607 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-210ENST00000471181 ARHGEF2Q92974 986 aaKnown RBP7.8□□□□□ -1.16
BRCA1-210ENST00000471181 ZMAT2Q96NC0 199 aaKnown RBP7.8□□□□□ -1.16
BRCA1-210ENST00000471181 AGTPBP1Q9UPW5 1226 aa7.8□□□□□ -1.16
BRCA1-210ENST00000471181 CLEC11AQ9Y240 323 aa7.8□□□□□ -1.16
BRCA1-210ENST00000471181 GIPC1O14908 333 aa7.8□□□□□ -1.16
BRCA1-210ENST00000471181 SMARCA5O60264 1052 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-210ENST00000471181 PPFIA2O75334 1257 aa7.8□□□□□ -1.16
BRCA1-210ENST00000471181 SULT6B1Q6IMI4 303 aa7.8□□□□□ -1.16
BRCA1-210ENST00000471181 ADAMTS8Q9UP79 889 aa7.8□□□□□ -1.16
BRCA1-210ENST00000471181 MVPQ14764 893 aaKnown RBP7.8□□□□□ -1.16
BRCA1-210ENST00000471181 LMBR1Q8WVP7 490 aa7.8□□□□□ -1.16
BRCA1-210ENST00000471181 FAM204AQ9H8W3 233 aa7.8□□□□□ -1.16
BRCA1-210ENST00000471181 C6orf229H3BNL8 230 aa7.79□□□□□ -1.16
BRCA1-210ENST00000471181 EBAG9O00559 213 aa7.79□□□□□ -1.16
BRCA1-210ENST00000471181 NBPF11Q86T75 865 aa7.79□□□□□ -1.16
BRCA1-210ENST00000471181 AFAP1L2Q8N4X5 818 aa7.79□□□□□ -1.16
BRCA1-210ENST00000471181 TMEM57Q8N5G2 664 aa7.79□□□□□ -1.16
BRCA1-210ENST00000471181 MSANTD4Q8NCY6 345 aa7.79□□□□□ -1.16
BRCA1-210ENST00000471181 NKIRAS1Q9NYS0 192 aa7.79□□□□□ -1.16
BRCA1-210ENST00000471181 CALM1P0DP23 149 aa7.79□□□□□ -1.16
BRCA1-210ENST00000471181 CALM2P0DP24 149 aa7.79□□□□□ -1.16
BRCA1-210ENST00000471181 CALM3P0DP25 149 aa7.79□□□□□ -1.16
BRCA1-210ENST00000471181 STAT6P42226 847 aa7.79□□□□□ -1.16
BRCA1-210ENST00000471181 CDCA7LQ96GN5 454 aa7.79□□□□□ -1.16
BRCA1-210ENST00000471181 SLC26A6Q9BXS9 759 aa7.79□□□□□ -1.16
BRCA1-210ENST00000471181 VCXQ9H320 206 aa7.79□□□□□ -1.16
BRCA1-210ENST00000471181 RNF41Q9H4P4 317 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-210ENST00000471181 ARFGAP3Q9NP61 516 aa7.79□□□□□ -1.16
BRCA1-210ENST00000471181 RMND1Q9NWS8 449 aa7.79□□□□□ -1.16
BRCA1-210ENST00000471181 ZBTB21Q9ULJ3 1066 aa7.79□□□□□ -1.16
BRCA1-210ENST00000471181 TSPY2A6NKD2 308 aa7.79□□□□□ -1.16
BRCA1-210ENST00000471181 ITIH3Q06033 890 aa7.79□□□□□ -1.16
BRCA1-210ENST00000471181 KMT5BQ4FZB7 885 aa7.79□□□□□ -1.16
BRCA1-210ENST00000471181 CCDC122Q5T0U0 273 aa7.79□□□□□ -1.16
BRCA1-210ENST00000471181 C10orf67Q8IYJ2 551 aa7.79□□□□□ -1.16
BRCA1-210ENST00000471181 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.79□□□□□ -1.16
BRCA1-210ENST00000471181 STARD3NLO95772 234 aa7.79□□□□□ -1.16
BRCA1-210ENST00000471181 TMEM67Q5HYA8 995 aa7.79□□□□□ -1.16
BRCA1-210ENST00000471181 MYD88Q99836 296 aa7.79□□□□□ -1.16
BRCA1-210ENST00000471181 TFIP11Q9UBB9 837 aaKnown RBP7.79□□□□□ -1.16
BRCA1-210ENST00000471181 BIN2Q9UBW5 565 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-210ENST00000471181 MTRF1LQ9UGC7 380 aaKnown RBP7.79□□□□□ -1.16
BRCA1-210ENST00000471181 CETN3O15182 167 aa7.79□□□□□ -1.16
BRCA1-210ENST00000471181 KRT9P35527 623 aa7.79□□□□□ -1.16
BRCA1-210ENST00000471181 NBPF1Q3BBV0 1214 aa7.79□□□□□ -1.16
BRCA1-210ENST00000471181 DNAI1Q9UI46 699 aa7.79□□□□□ -1.16
BRCA1-210ENST00000471181 HLA-DOAP06340 250 aa7.78□□□□□ -1.16
BRCA1-210ENST00000471181 ZC3H6P61129 1189 aaKnown RBP7.78□□□□□ -1.16
BRCA1-210ENST00000471181 PPARDQ03181 441 aa7.78□□□□□ -1.16
BRCA1-210ENST00000471181 TMEM132EQ6IEE7 984 aa7.78□□□□□ -1.16
BRCA1-210ENST00000471181 PAXBP1Q9Y5B6 917 aa7.78□□□□□ -1.16
BRCA1-210ENST00000471181 SPECC1L-ADORA2AF8WAN1 911 aa7.78□□□□□ -1.16
BRCA1-210ENST00000471181 DAPK3O43293 454 aa7.78□□□□□ -1.16
BRCA1-210ENST00000471181 ERICH3Q5RHP9 1530 aa7.78□□□□□ -1.16
BRCA1-210ENST00000471181 CTAGE9A4FU28 777 aa7.78□□□□□ -1.16
BRCA1-210ENST00000471181 PDIA4P13667 645 aaKnown RBP7.78□□□□□ -1.16
BRCA1-210ENST00000471181 UBASH3AP57075 661 aa7.78□□□□□ -1.16
BRCA1-210ENST00000471181 RNF168Q8IYW5 571 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms