RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 ZFATQ9P243 1243 aa6.48□□□□□ -1.37
PRPF3-204ENST00000470824 MAP3K6O95382 1288 aa6.47□□□□□ -1.37
PRPF3-204ENST00000470824 CD33P20138 364 aa6.47□□□□□ -1.37
PRPF3-204ENST00000470824 SOX18P35713 384 aa6.47□□□□□ -1.37
PRPF3-204ENST00000470824 VEGFBP49765 207 aa6.47□□□□□ -1.37
PRPF3-204ENST00000470824 FANCCQ00597 558 aa6.47□□□□□ -1.37
PRPF3-204ENST00000470824 FAM182BQ5T319 152 aa6.47□□□□□ -1.37
PRPF3-204ENST00000470824 NXPE4Q6UWF7 544 aa6.47□□□□□ -1.37
PRPF3-204ENST00000470824 NT5DC4Q86YG4 428 aa6.47□□□□□ -1.37
PRPF3-204ENST00000470824 BHMTQ93088 406 aa6.47□□□□□ -1.37
PRPF3-204ENST00000470824 KANSL3Q9P2N6 904 aa6.47□□□□□ -1.37
PRPF3-204ENST00000470824 SALL4Q9UJQ4 1053 aa6.47□□□□□ -1.37
PRPF3-204ENST00000470824 TRAK1Q9UPV9 953 aa6.47□□□□□ -1.37
PRPF3-204ENST00000470824 A0A1W2PP55 124 aa6.46□□□□□ -1.38
PRPF3-204ENST00000470824 USP17L7P0C7H9 530 aa6.46□□□□□ -1.38
PRPF3-204ENST00000470824 FGFR3P22607 806 aa6.46□□□□□ -1.38
PRPF3-204ENST00000470824 PLAURQ03405 335 aa6.46□□□□□ -1.38
PRPF3-204ENST00000470824 HYAL2Q12891 473 aa6.46□□□□□ -1.38
PRPF3-204ENST00000470824 GRIN2CQ14957 1233 aa6.46□□□□□ -1.38
PRPF3-204ENST00000470824 METTL16Q86W50 562 aaKnown RBP6.46□□□□□ -1.38
PRPF3-204ENST00000470824 NCAPG2Q86XI2 1143 aa6.46□□□□□ -1.38
PRPF3-204ENST00000470824 SLC16A10Q8TF71 515 aa6.46□□□□□ -1.38
PRPF3-204ENST00000470824 SLC30A3Q99726 388 aa6.46□□□□□ -1.38
PRPF3-204ENST00000470824 EHD4Q9H223 541 aa6.46□□□□□ -1.38
PRPF3-204ENST00000470824 HCN2Q9UL51 889 aa6.46□□□□□ -1.38
PRPF3-204ENST00000470824 USP31Q70CQ4 1352 aa6.45□□□□□ -1.38
PRPF3-204ENST00000470824 GRM2Q14416 872 aa6.45□□□□□ -1.38
PRPF3-204ENST00000470824 TAF1CQ15572 869 aaPredicted RBP6.45□□□□□ -1.38
PRPF3-204ENST00000470824 DHX32Q7L7V1 743 aaKnown RBP6.45□□□□□ -1.38
PRPF3-204ENST00000470824 USP35Q9P2H5 1018 aa6.45□□□□□ -1.38
PRPF3-204ENST00000470824 PRR12Q9ULL5 1215 aa6.45□□□□□ -1.38
PRPF3-204ENST00000470824 CDC14CA4D256 554 aa6.44□□□□□ -1.38
PRPF3-204ENST00000470824 IGSF3O75054 1194 aa6.44□□□□□ -1.38
PRPF3-204ENST00000470824 PPFIA3O75145 1194 aa6.44□□□□□ -1.38
PRPF3-204ENST00000470824 KIF4AO95239 1232 aa6.44□□□□□ -1.38
PRPF3-204ENST00000470824 HOXD8P13378 290 aaPredicted RBP6.44□□□□□ -1.38
PRPF3-204ENST00000470824 GSTT1P30711 240 aa6.44□□□□□ -1.38
PRPF3-204ENST00000470824 NRLP54845 237 aa6.44□□□□□ -1.38
PRPF3-204ENST00000470824 PEAR1Q5VY43 1037 aaPredicted RBP6.44□□□□□ -1.38
PRPF3-204ENST00000470824 SV2AQ7L0J3 742 aa6.44□□□□□ -1.38
PRPF3-204ENST00000470824 VWA5B2Q8N398 1253 aa6.44□□□□□ -1.38
PRPF3-204ENST00000470824 SPACA7Q96KW9 195 aa6.44□□□□□ -1.38
PRPF3-204ENST00000470824 LATS2Q9NRM7 1088 aa6.44□□□□□ -1.38
PRPF3-204ENST00000470824 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.44□□□□□ -1.38
PRPF3-204ENST00000470824 FAM181BA6NEQ2 426 aa6.43□□□□□ -1.38
PRPF3-204ENST00000470824 ST13P50502 369 aaKnown RBP6.43□□□□□ -1.38
PRPF3-204ENST00000470824 CTBSQ01459 385 aa6.43□□□□□ -1.38
PRPF3-204ENST00000470824 RAD51AP2Q09MP3 1159 aa6.43□□□□□ -1.38
PRPF3-204ENST00000470824 PCSK7Q16549 785 aa6.43□□□□□ -1.38
PRPF3-204ENST00000470824 NAALADL2Q58DX5 795 aa6.43□□□□□ -1.38
PRPF3-204ENST00000470824 MEI1Q5TIA1 1274 aa6.43□□□□□ -1.38
PRPF3-204ENST00000470824 RAB44Q7Z6P3 723 aaPredicted RBP6.43□□□□□ -1.38
PRPF3-204ENST00000470824 OSMRQ99650 979 aa6.43□□□□□ -1.38
PRPF3-204ENST00000470824 TGIF2Q9GZN2 237 aa6.43□□□□□ -1.38
PRPF3-204ENST00000470824 CCSER2Q9H7U1 834 aa6.43□□□□□ -1.38
PRPF3-204ENST00000470824 LIN7BQ9HAP6 207 aa6.43□□□□□ -1.38
PRPF3-204ENST00000470824 NXF1Q9UBU9 619 aaKnown RBP6.43□□□□□ -1.38
PRPF3-204ENST00000470824 GPR25O00155 361 aa6.42□□□□□ -1.38
PRPF3-204ENST00000470824 XRCC5P13010 732 aaKnown RBP6.42□□□□□ -1.38
PRPF3-204ENST00000470824 PTPN12Q05209 780 aaKnown RBP6.42□□□□□ -1.38
PRPF3-204ENST00000470824 COL13A1Q5TAT6 717 aaPredicted RBP6.42□□□□□ -1.38
PRPF3-204ENST00000470824 PRPF40BQ6NWY9 871 aaKnown RBP6.42□□□□□ -1.38
PRPF3-204ENST00000470824 HS2ST1Q7LGA3 356 aa6.42□□□□□ -1.38
PRPF3-204ENST00000470824 CEP120Q8N960 986 aa6.42□□□□□ -1.38
PRPF3-204ENST00000470824 GLIS3Q8NEA6 775 aa6.42□□□□□ -1.38
PRPF3-204ENST00000470824 TRPM4Q8TD43 1214 aa6.42□□□□□ -1.38
PRPF3-204ENST00000470824 NANOS1Q8WY41 292 aaKnown RBP6.42□□□□□ -1.38
PRPF3-204ENST00000470824 NSUN5Q96P11 429 aaKnown RBP6.42□□□□□ -1.38
PRPF3-204ENST00000470824 ZFYVE1Q9HBF4 777 aa6.42□□□□□ -1.38
PRPF3-204ENST00000470824 GGT7Q9UJ14 662 aa6.42□□□□□ -1.38
PRPF3-204ENST00000470824 LOC102724428A0A0B4J2F2 783 aa6.41□□□□□ -1.38
PRPF3-204ENST00000470824 TMEM238LA0A1B0GVL6 79 aa6.41□□□□□ -1.38
PRPF3-204ENST00000470824 BMP4P12644 408 aa6.41□□□□□ -1.38
PRPF3-204ENST00000470824 GMPRP36959 345 aa6.41□□□□□ -1.38
PRPF3-204ENST00000470824 FCGRTP55899 365 aa6.41□□□□□ -1.38
PRPF3-204ENST00000470824 SIK1P57059 783 aa6.41□□□□□ -1.38
PRPF3-204ENST00000470824 GPLD1P80108 840 aa6.41□□□□□ -1.38
PRPF3-204ENST00000470824 CCNJLQ8IV13 435 aa6.41□□□□□ -1.38
PRPF3-204ENST00000470824 IRF7Q92985 503 aa6.41□□□□□ -1.38
PRPF3-204ENST00000470824 ZKSCAN3Q9BRR0 538 aa6.41□□□□□ -1.38
PRPF3-204ENST00000470824 IGFLR1Q9H665 355 aa6.41□□□□□ -1.38
PRPF3-204ENST00000470824 DZANK1Q9NVP4 752 aa6.41□□□□□ -1.38
PRPF3-204ENST00000470824 TTF2Q9UNY4 1162 aaKnown RBP6.41□□□□□ -1.38
PRPF3-204ENST00000470824 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.41□□□□□ -1.38
PRPF3-204ENST00000470824 SIN3BO75182 1162 aa6.4□□□□□ -1.38
PRPF3-204ENST00000470824 DTHD1Q6ZMT9 781 aa6.4□□□□□ -1.38
PRPF3-204ENST00000470824 SYT9Q86SS6 491 aa6.4□□□□□ -1.38
PRPF3-204ENST00000470824 ZNF654Q8IZM8 581 aa6.4□□□□□ -1.38
PRPF3-204ENST00000470824 ZSCAN1Q8NBB4 408 aa6.4□□□□□ -1.38
PRPF3-204ENST00000470824 C3orf58Q8NDZ4 430 aa6.4□□□□□ -1.38
PRPF3-204ENST00000470824 SREK1Q8WXA9 508 aaKnown RBP6.4□□□□□ -1.38
PRPF3-204ENST00000470824 TCF12Q99081 682 aa6.4□□□□□ -1.38
PRPF3-204ENST00000470824 OXCT2Q9BYC2 517 aaPredicted RBP6.4□□□□□ -1.38
PRPF3-204ENST00000470824 RBSNQ9H1K0 784 aa6.4□□□□□ -1.38
PRPF3-204ENST00000470824 PPM1HQ9ULR3 514 aa6.4□□□□□ -1.38
PRPF3-204ENST00000470824 AKAP2Q9Y2D5 859 aa6.4□□□□□ -1.38
PRPF3-204ENST00000470824 ZBTB42B2RXF5 422 aa6.39□□□□□ -1.39
PRPF3-204ENST00000470824 J3QW42 95 aa6.39□□□□□ -1.39
PRPF3-204ENST00000470824 GHRHP01286 108 aa6.39□□□□□ -1.39
PRPF3-204ENST00000470824 ACPPP15309 386 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms