RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 ANKRD31Q8N7Z5 1873 aa10.19□□□□□ -0.78
GTF3A-206ENST00000470606 POLRMTO00411 1230 aaKnown RBP10.19□□□□□ -0.78
GTF3A-206ENST00000470606 CHGBP05060 677 aa10.19□□□□□ -0.78
GTF3A-206ENST00000470606 CCDC152Q4G0S7 254 aa10.19□□□□□ -0.78
GTF3A-206ENST00000470606 TAF7LQ5H9L4 462 aa10.19□□□□□ -0.78
GTF3A-206ENST00000470606 CELF1Q92879 486 aaKnown RBP10.19□□□□□ -0.78
GTF3A-206ENST00000470606 CEP126Q9P2H0 1117 aa10.19□□□□□ -0.78
GTF3A-206ENST00000470606 ATP5JP18859 108 aa10.18□□□□□ -0.78
GTF3A-206ENST00000470606 NEUROD6Q96NK8 337 aa10.18□□□□□ -0.78
GTF3A-206ENST00000470606 NYXQ9GZU5 481 aa10.18□□□□□ -0.78
GTF3A-206ENST00000470606 CNNM1Q9NRU3 951 aa10.18□□□□□ -0.78
GTF3A-206ENST00000470606 MYO5AQ9Y4I1 1855 aaKnown RBP10.18□□□□□ -0.78
GTF3A-206ENST00000470606 TAF5LO75529 589 aa10.17□□□□□ -0.78
GTF3A-206ENST00000470606 PDE8BO95263 885 aa10.17□□□□□ -0.78
GTF3A-206ENST00000470606 SERPINB2P05120 415 aa10.17□□□□□ -0.78
GTF3A-206ENST00000470606 FGFR2P21802 821 aa10.17□□□□□ -0.78
GTF3A-206ENST00000470606 GTF2E1P29083 439 aaPredicted RBP10.17□□□□□ -0.78
GTF3A-206ENST00000470606 SCARF1Q14162 830 aa10.17□□□□□ -0.78
GTF3A-206ENST00000470606 METTL24Q5JXM2 366 aa10.17□□□□□ -0.78
GTF3A-206ENST00000470606 XAGE2Q96GT9 111 aa10.17□□□□□ -0.78
GTF3A-206ENST00000470606 KIF2CQ99661 725 aa10.17□□□□□ -0.78
GTF3A-206ENST00000470606 NRXN2Q9P2S2 1712 aa10.17□□□□□ -0.78
GTF3A-206ENST00000470606 SRCAPQ6ZRS2 3230 aa10.17□□□□□ -0.78
GTF3A-206ENST00000470606 ARAP2Q8WZ64 1704 aa10.17□□□□□ -0.78
GTF3A-206ENST00000470606 ERC2O15083 957 aa10.17□□□□□ -0.78
GTF3A-206ENST00000470606 CNBD1Q8NA66 436 aa10.17□□□□□ -0.78
GTF3A-206ENST00000470606 MSH5O43196 834 aa10.16□□□□□ -0.78
GTF3A-206ENST00000470606 SLC15A2Q16348 729 aa10.16□□□□□ -0.78
GTF3A-206ENST00000470606 ATP2B3Q16720 1220 aa10.16□□□□□ -0.78
GTF3A-206ENST00000470606 PI16Q6UXB8 463 aa10.16□□□□□ -0.78
GTF3A-206ENST00000470606 NLRP3Q96P20 1036 aa10.16□□□□□ -0.78
GTF3A-206ENST00000470606 ESYT1Q9BSJ8 1104 aa10.16□□□□□ -0.78
GTF3A-206ENST00000470606 C22orf23Q9BZE7 217 aa10.16□□□□□ -0.78
GTF3A-206ENST00000470606 CHRNDQ07001 517 aa10.15□□□□□ -0.78
GTF3A-206ENST00000470606 SLFNL1Q499Z3 407 aa10.15□□□□□ -0.78
GTF3A-206ENST00000470606 CRY2Q49AN0 593 aa10.15□□□□□ -0.78
GTF3A-206ENST00000470606 MSL1Q68DK7 614 aa10.15□□□□□ -0.78
GTF3A-206ENST00000470606 GPATCH3Q96I76 525 aa10.15□□□□□ -0.78
GTF3A-206ENST00000470606 MPHOSPH8Q99549 860 aa10.15□□□□□ -0.78
GTF3A-206ENST00000470606 HAUS7Q99871 368 aa10.15□□□□□ -0.78
GTF3A-206ENST00000470606 USP26Q9BXU7 913 aa10.15□□□□□ -0.78
GTF3A-206ENST00000470606 MINPP1Q9UNW1 487 aa10.15□□□□□ -0.78
GTF3A-206ENST00000470606 QSER1Q2KHR3 1735 aa10.15□□□□□ -0.78
GTF3A-206ENST00000470606 HSP90B1P14625 803 aaKnown RBP10.15□□□□□ -0.79
GTF3A-206ENST00000470606 RBM25P49756 843 aaKnown RBP10.15□□□□□ -0.79
GTF3A-206ENST00000470606 CNTROBQ8N137 903 aa10.15□□□□□ -0.79
GTF3A-206ENST00000470606 EVI5LQ96CN4 794 aa10.15□□□□□ -0.79
GTF3A-206ENST00000470606 ANTXR1Q9H6X2 564 aa10.15□□□□□ -0.79
GTF3A-206ENST00000470606 BSDC1Q9NW68 430 aaPredicted RBP10.15□□□□□ -0.79
GTF3A-206ENST00000470606 MROH5Q6ZUA9 1318 aa10.15□□□□□ -0.79
GTF3A-206ENST00000470606 IGHMBP2P38935 993 aaKnown RBP10.14□□□□□ -0.79
GTF3A-206ENST00000470606 PHKA1P46020 1223 aa10.14□□□□□ -0.79
GTF3A-206ENST00000470606 RPS8P62241 208 aaKnown RBP10.14□□□□□ -0.79
GTF3A-206ENST00000470606 DDX46Q7L014 1031 aaKnown RBP10.14□□□□□ -0.79
GTF3A-206ENST00000470606 ANKRD18AQ8IVF6 992 aa10.14□□□□□ -0.79
GTF3A-206ENST00000470606 FAM227BQ96M60 508 aa10.14□□□□□ -0.79
GTF3A-206ENST00000470606 CDC5LQ99459 802 aaKnown RBP10.14□□□□□ -0.79
GTF3A-206ENST00000470606 AKAP2Q9Y2D5 859 aa10.14□□□□□ -0.79
GTF3A-206ENST00000470606 SGSM2O43147 1006 aa10.13□□□□□ -0.79
GTF3A-206ENST00000470606 MMP10P09238 476 aa10.13□□□□□ -0.79
GTF3A-206ENST00000470606 MCAMP43121 646 aa10.13□□□□□ -0.79
GTF3A-206ENST00000470606 PUM3Q15397 648 aaKnown RBP10.13□□□□□ -0.79
GTF3A-206ENST00000470606 NLGN1Q8N2Q7 840 aa10.13□□□□□ -0.79
GTF3A-206ENST00000470606 DNAJC2Q99543 621 aaKnown RBP10.13□□□□□ -0.79
GTF3A-206ENST00000470606 SNRKQ9NRH2 765 aa10.13□□□□□ -0.79
GTF3A-206ENST00000470606 COL11A2P13942 1736 aaPredicted RBP10.13□□□□□ -0.79
GTF3A-206ENST00000470606 A0A0D9SFI3 127 aa10.13□□□□□ -0.79
GTF3A-206ENST00000470606 KLRG2A4D1S0 409 aaPredicted RBP10.13□□□□□ -0.79
GTF3A-206ENST00000470606 KLRK1P26718 216 aa10.13□□□□□ -0.79
GTF3A-206ENST00000470606 ANP32AP39687 249 aaKnown RBP10.13□□□□□ -0.79
GTF3A-206ENST00000470606 CCDC102BQ68D86 513 aa10.13□□□□□ -0.79
GTF3A-206ENST00000470606 CWC27Q6UX04 472 aaKnown RBP10.13□□□□□ -0.79
GTF3A-206ENST00000470606 GOLIM4O00461 696 aa10.12□□□□□ -0.79
GTF3A-206ENST00000470606 NPHP1O15259 732 aa10.12□□□□□ -0.79
GTF3A-206ENST00000470606 FLAD1Q8NFF5 587 aa10.12□□□□□ -0.79
GTF3A-206ENST00000470606 LPIN2Q92539 896 aa10.12□□□□□ -0.79
GTF3A-206ENST00000470606 IPO9Q96P70 1041 aaKnown RBP10.12□□□□□ -0.79
GTF3A-206ENST00000470606 MYH7P12883 1935 aa10.12□□□□□ -0.79
GTF3A-206ENST00000470606 IRS2Q9Y4H2 1338 aa10.11□□□□□ -0.79
GTF3A-206ENST00000470606 IFIT1P09914 478 aaKnown RBP10.11□□□□□ -0.79
GTF3A-206ENST00000470606 ZAP70P43403 619 aa10.11□□□□□ -0.79
GTF3A-206ENST00000470606 BAG6P46379 1132 aa10.11□□□□□ -0.79
GTF3A-206ENST00000470606 SLC4A3P48751 1232 aa10.11□□□□□ -0.79
GTF3A-206ENST00000470606 BCAMP50895 628 aa10.11□□□□□ -0.79
GTF3A-206ENST00000470606 NMIQ13287 307 aaPredicted RBP10.11□□□□□ -0.79
GTF3A-206ENST00000470606 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.11□□□□□ -0.79
GTF3A-206ENST00000470606 LSG1Q9H089 658 aaKnown RBP10.11□□□□□ -0.79
GTF3A-206ENST00000470606 UPF2Q9HAU5 1272 aaKnown RBP10.11□□□□□ -0.79
GTF3A-206ENST00000470606 PAG1Q9NWQ8 432 aa10.11□□□□□ -0.79
GTF3A-206ENST00000470606 UTRNP46939 3433 aa10.11□□□□□ -0.79
GTF3A-206ENST00000470606 HMGB2P26583 209 aaKnown RBP10.11□□□□□ -0.79
GTF3A-206ENST00000470606 ARID4AP29374 1257 aaPredicted RBP10.11□□□□□ -0.79
GTF3A-206ENST00000470606 FKBP4Q02790 459 aaKnown RBP eCLIP10.11□□□□□ -0.79
GTF3A-206ENST00000470606 PTH1RQ03431 593 aa10.11□□□□□ -0.79
GTF3A-206ENST00000470606 GRAPQ13588 217 aa10.11□□□□□ -0.79
GTF3A-206ENST00000470606 CASC1Q6TDU7 716 aa10.11□□□□□ -0.79
GTF3A-206ENST00000470606 ZNF589Q86UQ0 364 aaPredicted RBP10.11□□□□□ -0.79
GTF3A-206ENST00000470606 TXNRD3Q86VQ6 643 aa10.11□□□□□ -0.79
GTF3A-206ENST00000470606 KBTBD3Q8NAB2 608 aa10.11□□□□□ -0.79
GTF3A-206ENST00000470606 GRAPLQ8TC17 118 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms