RNA–Protein interactions for RNA: ENST00000470458.1

RFTN1-208, Transcript of raftlin, lipid raft linker 1, human

TSL 4

Gene RFTN1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFTN1-208	ENST00000470458	CDCA7L	Q96GN5	454 aa		13.7	□□□□□ -0.22
RFTN1-208	ENST00000470458	TAF1	P21675	1872 aa		13.7	□□□□□ -0.22
RFTN1-208	ENST00000470458	ITGA6	P23229	1130 aa		13.69	□□□□□ -0.22
RFTN1-208	ENST00000470458	RPS12	P25398	132 aa	Known RBP	13.69	□□□□□ -0.22
RFTN1-208	ENST00000470458	CASP7	P55210	303 aa		13.69	□□□□□ -0.22
RFTN1-208	ENST00000470458	TBC1D16	Q8TBP0	767 aa		13.69	□□□□□ -0.22
RFTN1-208	ENST00000470458	GREM2	Q9H772	168 aa		13.69	□□□□□ -0.22
RFTN1-208	ENST00000470458	GJA3	Q9Y6H8	435 aa		13.69	□□□□□ -0.22
RFTN1-208	ENST00000470458	UTY	O14607	1347 aa		13.68	□□□□□ -0.22
RFTN1-208	ENST00000470458		H7C1D1	291 aa		13.68	□□□□□ -0.22
RFTN1-208	ENST00000470458	UFL1	O94874	794 aa		13.68	□□□□□ -0.22
RFTN1-208	ENST00000470458	EPHX2	P34913	555 aa		13.68	□□□□□ -0.22
RFTN1-208	ENST00000470458	GPSM2	P81274	684 aa		13.68	□□□□□ -0.22
RFTN1-208	ENST00000470458	CHADL	Q6NUI6	762 aa		13.68	□□□□□ -0.22
RFTN1-208	ENST00000470458	USP50	Q70EL3	339 aa	Predicted RBP	13.68	□□□□□ -0.22
RFTN1-208	ENST00000470458	PODN	Q7Z5L7	613 aa		13.68	□□□□□ -0.22
RFTN1-208	ENST00000470458	BCL2L13	Q9BXK5	485 aa		13.68	□□□□□ -0.22
RFTN1-208	ENST00000470458	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.68	□□□□□ -0.22
RFTN1-208	ENST00000470458	SEC31B	Q9NQW1	1179 aa		13.68	□□□□□ -0.22
RFTN1-208	ENST00000470458	CHMP3	Q9Y3E7	222 aa		13.68	□□□□□ -0.22
RFTN1-208	ENST00000470458	ZBED9	Q6R2W3	1325 aa		13.67	□□□□□ -0.22
RFTN1-208	ENST00000470458	KCNJ4	P48050	445 aa		13.67	□□□□□ -0.22
RFTN1-208	ENST00000470458	DPF2	Q92785	391 aa		13.67	□□□□□ -0.22
RFTN1-208	ENST00000470458	JARID2	Q92833	1246 aa	Predicted RBP	13.67	□□□□□ -0.22
RFTN1-208	ENST00000470458	MINPP1	Q9UNW1	487 aa		13.67	□□□□□ -0.22
RFTN1-208	ENST00000470458	RARS	P54136	660 aa	Known RBP	13.66	□□□□□ -0.22
RFTN1-208	ENST00000470458	CXCL9	Q07325	125 aa		13.66	□□□□□ -0.22
RFTN1-208	ENST00000470458	LMBR1L	Q6UX01	489 aa		13.66	□□□□□ -0.22
RFTN1-208	ENST00000470458	ZC3H15	Q8WU90	426 aa	Known RBP	13.66	□□□□□ -0.22
RFTN1-208	ENST00000470458	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.66	□□□□□ -0.22
RFTN1-208	ENST00000470458	ADARB2	Q9NS39	739 aa	Known RBP	13.66	□□□□□ -0.22
RFTN1-208	ENST00000470458	POLL	Q9UGP5	575 aa		13.66	□□□□□ -0.22
RFTN1-208	ENST00000470458	CLEC11A	Q9Y240	323 aa		13.66	□□□□□ -0.22
RFTN1-208	ENST00000470458	ZNF541	Q9H0D2	1346 aa		13.65	□□□□□ -0.22
RFTN1-208	ENST00000470458	POTEC	B2RU33	542 aa		13.65	□□□□□ -0.22
RFTN1-208	ENST00000470458	MS4A1	P11836	297 aa		13.65	□□□□□ -0.22
RFTN1-208	ENST00000470458	FOXO4	P98177	505 aa		13.65	□□□□□ -0.22
RFTN1-208	ENST00000470458	LDHAL6A	Q6ZMR3	332 aa		13.65	□□□□□ -0.22
RFTN1-208	ENST00000470458	COA1	Q9GZY4	146 aa		13.65	□□□□□ -0.22
RFTN1-208	ENST00000470458	NOB1	Q9ULX3	412 aa	Known RBP	13.65	□□□□□ -0.22
RFTN1-208	ENST00000470458	MED23	Q9ULK4	1368 aa		13.65	□□□□□ -0.22
RFTN1-208	ENST00000470458	MYO3B	Q8WXR4	1341 aa		13.64	□□□□□ -0.23
RFTN1-208	ENST00000470458	RIMBP2	O15034	1052 aa		13.64	□□□□□ -0.23
RFTN1-208	ENST00000470458	ECE2	O60344	883 aa		13.64	□□□□□ -0.23
RFTN1-208	ENST00000470458	GNAI3	P08754	354 aa		13.64	□□□□□ -0.23
RFTN1-208	ENST00000470458	FAM161A	Q3B820	660 aa		13.64	□□□□□ -0.23
RFTN1-208	ENST00000470458	CNNM1	Q9NRU3	951 aa		13.64	□□□□□ -0.23
RFTN1-208	ENST00000470458	GPRC5D	Q9NZD1	345 aa		13.64	□□□□□ -0.23
RFTN1-208	ENST00000470458	FBXO3	Q9UK99	471 aa		13.64	□□□□□ -0.23
RFTN1-208	ENST00000470458	ZNF804B	A4D1E1	1349 aa		13.64	□□□□□ -0.23
RFTN1-208	ENST00000470458	MROH5	Q6ZUA9	1318 aa		13.64	□□□□□ -0.23
RFTN1-208	ENST00000470458	UBTFL1	P0CB47	393 aa	Predicted RBP	13.63	□□□□□ -0.23
RFTN1-208	ENST00000470458	EAPP	Q56P03	285 aa	Predicted RBP	13.63	□□□□□ -0.23
RFTN1-208	ENST00000470458	AGBL3	Q8NEM8	1001 aa		13.63	□□□□□ -0.23
RFTN1-208	ENST00000470458	RABL6	Q3YEC7	729 aa	Predicted RBP	13.62	□□□□□ -0.23
RFTN1-208	ENST00000470458	C15orf52	Q6ZUT6	534 aa	Known RBP	13.62	□□□□□ -0.23
RFTN1-208	ENST00000470458	OGFOD1	Q8N543	542 aa		13.62	□□□□□ -0.23
RFTN1-208	ENST00000470458	USP44	Q9H0E7	712 aa		13.62	□□□□□ -0.23
RFTN1-208	ENST00000470458	CNOT7	Q9UIV1	285 aa	Known RBP	13.62	□□□□□ -0.23
RFTN1-208	ENST00000470458	LTBP1	Q14766	1721 aa		13.61	□□□□□ -0.23
RFTN1-208	ENST00000470458	USP17L3	A6NCW0	530 aa		13.61	□□□□□ -0.23
RFTN1-208	ENST00000470458	USP17L4	A6NCW7	530 aa		13.61	□□□□□ -0.23
RFTN1-208	ENST00000470458	RAD17	O75943	681 aa		13.61	□□□□□ -0.23
RFTN1-208	ENST00000470458	VIL1	P09327	827 aa	Known RBP	13.61	□□□□□ -0.23
RFTN1-208	ENST00000470458	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.61	□□□□□ -0.23
RFTN1-208	ENST00000470458	SCNN1D	P51172	638 aa		13.61	□□□□□ -0.23
RFTN1-208	ENST00000470458	CHRND	Q07001	517 aa		13.61	□□□□□ -0.23
RFTN1-208	ENST00000470458	UBE4A	Q14139	1066 aa		13.61	□□□□□ -0.23
RFTN1-208	ENST00000470458	ZKSCAN2	Q63HK3	967 aa		13.61	□□□□□ -0.23
RFTN1-208	ENST00000470458	INTS3	Q68E01	1043 aa	Known RBP	13.61	□□□□□ -0.23
RFTN1-208	ENST00000470458	ATF7IP	Q6VMQ6	1270 aa		13.61	□□□□□ -0.23
RFTN1-208	ENST00000470458	USP17L1	Q7RTZ2	530 aa		13.61	□□□□□ -0.23
RFTN1-208	ENST00000470458	ZNF804A	Q7Z570	1209 aa		13.61	□□□□□ -0.23
RFTN1-208	ENST00000470458	CHMP4B	Q9H444	224 aa	Known RBP	13.61	□□□□□ -0.23
RFTN1-208	ENST00000470458	DBNDD1	Q9H9R9	158 aa		13.61	□□□□□ -0.23
RFTN1-208	ENST00000470458	ZNF609	O15014	1411 aa		13.6	□□□□□ -0.23
RFTN1-208	ENST00000470458	GMPS	P49915	693 aa	Predicted RBP	13.6	□□□□□ -0.23
RFTN1-208	ENST00000470458	DOK7	Q18PE1	504 aa		13.6	□□□□□ -0.23
RFTN1-208	ENST00000470458	STRIP1	Q5VSL9	837 aa		13.6	□□□□□ -0.23
RFTN1-208	ENST00000470458	CNTROB	Q8N137	903 aa		13.6	□□□□□ -0.23
RFTN1-208	ENST00000470458	DUOX1	Q9NRD9	1551 aa		13.6	□□□□□ -0.23
RFTN1-208	ENST00000470458	SPEF2	Q9C093	1822 aa		13.6	□□□□□ -0.23
RFTN1-208	ENST00000470458	PSMD14	O00487	310 aa		13.59	□□□□□ -0.23
RFTN1-208	ENST00000470458	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.59	□□□□□ -0.23
RFTN1-208	ENST00000470458	CREBZF	Q9NS37	354 aa		13.59	□□□□□ -0.23
RFTN1-208	ENST00000470458	HDAC9	Q9UKV0	1011 aa		13.59	□□□□□ -0.23
RFTN1-208	ENST00000470458	PSME4	Q14997	1843 aa		13.58	□□□□□ -0.24
RFTN1-208	ENST00000470458	YDJC	A8MPS7	323 aa		13.58	□□□□□ -0.24
RFTN1-208	ENST00000470458	EPS15	P42566	896 aa		13.58	□□□□□ -0.24
RFTN1-208	ENST00000470458	CAVIN4	Q5BKX8	364 aa		13.58	□□□□□ -0.24
RFTN1-208	ENST00000470458	CDC37L1	Q7L3B6	337 aa		13.58	□□□□□ -0.24
RFTN1-208	ENST00000470458	FTSJ3	Q8IY81	847 aa	Known RBP	13.58	□□□□□ -0.24
RFTN1-208	ENST00000470458	FRAT1	Q92837	279 aa	Predicted RBP	13.58	□□□□□ -0.24
RFTN1-208	ENST00000470458	SUCLG2	Q96I99	432 aa		13.58	□□□□□ -0.24
RFTN1-208	ENST00000470458	BICC1	Q9H694	974 aa	Known RBP	13.58	□□□□□ -0.24
RFTN1-208	ENST00000470458	PGAP2	Q9UHJ9	254 aa		13.58	□□□□□ -0.24
RFTN1-208	ENST00000470458	USP17L8	P0C7I0	530 aa		13.57	□□□□□ -0.24
RFTN1-208	ENST00000470458	FKBP1A	P62942	108 aa	Known RBP	13.57	□□□□□ -0.24
RFTN1-208	ENST00000470458	TTLL5	Q6EMB2	1281 aa		13.57	□□□□□ -0.24
RFTN1-208	ENST00000470458	VPS37D	Q86XT2	251 aa		13.57	□□□□□ -0.24

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