RNA–Protein interactions for RNA: ENST00000469769.1

THBS3-206, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-206ENST00000469769 RPGRQ92834 1020 aaKnown RBP12.82□□□□□ -0.36
THBS3-206ENST00000469769 MPHOSPH8Q99549 860 aa12.82□□□□□ -0.36
THBS3-206ENST00000469769 LNPKQ9C0E8 428 aa12.82□□□□□ -0.36
THBS3-206ENST00000469769 SIL1Q9H173 461 aa12.82□□□□□ -0.36
THBS3-206ENST00000469769 OSBPL3Q9H4L5 887 aa12.82□□□□□ -0.36
THBS3-206ENST00000469769 MINPP1Q9UNW1 487 aa12.82□□□□□ -0.36
THBS3-206ENST00000469769 LRRC37AA6NMS7 1700 aa12.82□□□□□ -0.36
THBS3-206ENST00000469769 SPEF2Q9C093 1822 aa12.81□□□□□ -0.36
THBS3-206ENST00000469769 ZBTB22O15209 634 aa12.81□□□□□ -0.36
THBS3-206ENST00000469769 SMARCA5O60264 1052 aaPredicted RBP12.81□□□□□ -0.36
THBS3-206ENST00000469769 PDE8BO95263 885 aa12.81□□□□□ -0.36
THBS3-206ENST00000469769 FGFR2P21802 821 aa12.81□□□□□ -0.36
THBS3-206ENST00000469769 KCNA3P22001 575 aa12.81□□□□□ -0.36
THBS3-206ENST00000469769 ALDH1B1P30837 517 aa12.81□□□□□ -0.36
THBS3-206ENST00000469769 TFCP2Q12800 502 aa12.81□□□□□ -0.36
THBS3-206ENST00000469769 CLASRPQ8N2M8 674 aaKnown RBP12.81□□□□□ -0.36
THBS3-206ENST00000469769 EAF2Q96CJ1 260 aaPredicted RBP12.81□□□□□ -0.36
THBS3-206ENST00000469769 CEP126Q9P2H0 1117 aa12.81□□□□□ -0.36
THBS3-206ENST00000469769 STAP2Q9UGK3 403 aa12.81□□□□□ -0.36
THBS3-206ENST00000469769 CD2APQ9Y5K6 639 aa12.81□□□□□ -0.36
THBS3-206ENST00000469769 H0YIN7 160 aa12.8□□□□□ -0.36
THBS3-206ENST00000469769 OS9Q13438 667 aaPredicted RBP12.8□□□□□ -0.36
THBS3-206ENST00000469769 TNNI3KQ59H18 835 aa12.8□□□□□ -0.36
THBS3-206ENST00000469769 C2CD5Q86YS7 1000 aa12.8□□□□□ -0.36
THBS3-206ENST00000469769 PLEKHM2Q8IWE5 1019 aa12.8□□□□□ -0.36
THBS3-206ENST00000469769 SPON1Q9HCB6 807 aa12.8□□□□□ -0.36
THBS3-206ENST00000469769 CNNM1Q9NRU3 951 aa12.8□□□□□ -0.36
THBS3-206ENST00000469769 FPGT-TNNI3KV9GXZ4 949 aa12.8□□□□□ -0.36
THBS3-206ENST00000469769 BRCA1P38398 1863 aaKnown RBP12.8□□□□□ -0.36
THBS3-206ENST00000469769 LTBP1Q14766 1721 aa12.79□□□□□ -0.36
THBS3-206ENST00000469769 CHRNDQ07001 517 aa12.79□□□□□ -0.36
THBS3-206ENST00000469769 SP8Q8IXZ3 490 aa12.79□□□□□ -0.36
THBS3-206ENST00000469769 C16orf71Q8IYS4 520 aaPredicted RBP12.79□□□□□ -0.36
THBS3-206ENST00000469769 C7orf43Q8WVR3 580 aa12.79□□□□□ -0.36
THBS3-206ENST00000469769 CNKSR1Q969H4 720 aa12.79□□□□□ -0.36
THBS3-206ENST00000469769 IL1RAPL2Q9NP60 686 aa12.79□□□□□ -0.36
THBS3-206ENST00000469769 PODXL2Q9NZ53 605 aa12.79□□□□□ -0.36
THBS3-206ENST00000469769 AKAP2Q9Y2D5 859 aa12.79□□□□□ -0.36
THBS3-206ENST00000469769 ZNF609O15014 1411 aa12.79□□□□□ -0.36
THBS3-206ENST00000469769 SNED1Q8TER0 1413 aa12.79□□□□□ -0.36
THBS3-206ENST00000469769 SLX4Q8IY92 1834 aa12.78□□□□□ -0.36
THBS3-206ENST00000469769 METTL24Q5JXM2 366 aa12.78□□□□□ -0.36
THBS3-206ENST00000469769 ANKRD2Q9GZV1 360 aa12.78□□□□□ -0.36
THBS3-206ENST00000469769 ATP6V0A2Q9Y487 856 aa12.78□□□□□ -0.36
THBS3-206ENST00000469769 ARAP2Q8WZ64 1704 aa12.78□□□□□ -0.36
THBS3-206ENST00000469769 AOX1Q06278 1338 aa12.78□□□□□ -0.36
THBS3-206ENST00000469769 A0A1B0GUL7 405 aa12.77□□□□□ -0.37
THBS3-206ENST00000469769 APBB1O00213 710 aa12.77□□□□□ -0.37
THBS3-206ENST00000469769 CHRNA5P30532 468 aa12.77□□□□□ -0.37
THBS3-206ENST00000469769 PDE1AP54750 535 aa12.77□□□□□ -0.37
THBS3-206ENST00000469769 UBE4AQ14139 1066 aa12.77□□□□□ -0.37
THBS3-206ENST00000469769 PUM3Q15397 648 aaKnown RBP12.77□□□□□ -0.37
THBS3-206ENST00000469769 C15orf52Q6ZUT6 534 aaKnown RBP12.77□□□□□ -0.37
THBS3-206ENST00000469769 SKAP1Q86WV1 359 aa12.77□□□□□ -0.37
THBS3-206ENST00000469769 OTUD7AQ8TE49 926 aaPredicted RBP12.77□□□□□ -0.37
THBS3-206ENST00000469769 LPIN2Q92539 896 aa12.77□□□□□ -0.37
THBS3-206ENST00000469769 ZBTB47Q9UFB7 747 aaPredicted RBP12.77□□□□□ -0.37
THBS3-206ENST00000469769 DBNLQ9UJU6 430 aaKnown RBP12.77□□□□□ -0.37
THBS3-206ENST00000469769 TTC41PQ6P2S7 1318 aa12.77□□□□□ -0.37
THBS3-206ENST00000469769 IRS2Q9Y4H2 1338 aa12.77□□□□□ -0.37
THBS3-206ENST00000469769 TIMM10P62072 90 aa12.76□□□□□ -0.37
THBS3-206ENST00000469769 ATP2B3Q16720 1220 aa12.76□□□□□ -0.37
THBS3-206ENST00000469769 AACSQ86V21 672 aa12.76□□□□□ -0.37
THBS3-206ENST00000469769 ZNF512BQ96KM6 892 aaPredicted RBP12.76□□□□□ -0.37
THBS3-206ENST00000469769 LEMD3Q9Y2U8 911 aa12.76□□□□□ -0.37
THBS3-206ENST00000469769 PPEF1O14829 653 aaPredicted RBP12.75□□□□□ -0.37
THBS3-206ENST00000469769 IFIT2P09913 472 aaKnown RBP12.75□□□□□ -0.37
THBS3-206ENST00000469769 DPEP1P16444 411 aa12.75□□□□□ -0.37
THBS3-206ENST00000469769 MX1P20591 662 aa12.75□□□□□ -0.37
THBS3-206ENST00000469769 XDHP47989 1333 aa12.75□□□□□ -0.37
THBS3-206ENST00000469769 C1QTNF8P60827 252 aa12.75□□□□□ -0.37
THBS3-206ENST00000469769 GRIPAP1Q4V328 841 aa12.75□□□□□ -0.37
THBS3-206ENST00000469769 CC2D2BQ6DHV5 1058 aa12.75□□□□□ -0.37
THBS3-206ENST00000469769 PRPF40BQ6NWY9 871 aaKnown RBP12.75□□□□□ -0.37
THBS3-206ENST00000469769 PI4K2BQ8TCG2 481 aa12.75□□□□□ -0.37
THBS3-206ENST00000469769 CCDC8Q9H0W5 538 aaPredicted RBP12.75□□□□□ -0.37
THBS3-206ENST00000469769 CACNA1SQ13698 1873 aa12.74□□□□□ -0.37
THBS3-206ENST00000469769 ZNF804BA4D1E1 1349 aa12.74□□□□□ -0.37
THBS3-206ENST00000469769 TAF5LO75529 589 aa12.74□□□□□ -0.37
THBS3-206ENST00000469769 TTLL6Q8N841 843 aa12.74□□□□□ -0.37
THBS3-206ENST00000469769 HELBQ8NG08 1087 aaPredicted RBP12.74□□□□□ -0.37
THBS3-206ENST00000469769 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.74□□□□□ -0.37
THBS3-206ENST00000469769 ZNF622Q969S3 477 aaKnown RBP eCLIP12.74□□□□□ -0.37
THBS3-206ENST00000469769 XAGE2Q96GT9 111 aa12.74□□□□□ -0.37
THBS3-206ENST00000469769 DBNDD2Q9BQY9 259 aa12.74□□□□□ -0.37
THBS3-206ENST00000469769 ECHDC1Q9NTX5 307 aa12.74□□□□□ -0.37
THBS3-206ENST00000469769 TLR7Q9NYK1 1049 aaKnown RBP12.74□□□□□ -0.37
THBS3-206ENST00000469769 AKAP11Q9UKA4 1901 aa12.74□□□□□ -0.37
THBS3-206ENST00000469769 A0A0G2JLW4 131 aa12.73□□□□□ -0.37
THBS3-206ENST00000469769 SNAP23O00161 211 aa12.73□□□□□ -0.37
THBS3-206ENST00000469769 SLC34A2O95436 690 aa12.73□□□□□ -0.37
THBS3-206ENST00000469769 SLC5A1P13866 664 aa12.73□□□□□ -0.37
THBS3-206ENST00000469769 ATP5JP18859 108 aa12.73□□□□□ -0.37
THBS3-206ENST00000469769 ATP2B4P23634 1241 aa12.73□□□□□ -0.37
THBS3-206ENST00000469769 GPSM2P81274 684 aa12.73□□□□□ -0.37
THBS3-206ENST00000469769 BMP2KLQ5H9B9 411 aa12.73□□□□□ -0.37
THBS3-206ENST00000469769 RTFDC1Q9BY42 306 aaPredicted RBP12.73□□□□□ -0.37
THBS3-206ENST00000469769 PIM2Q9P1W9 311 aa12.73□□□□□ -0.37
THBS3-206ENST00000469769 DUOX1Q9NRD9 1551 aa12.73□□□□□ -0.37
THBS3-206ENST00000469769 WTIPA6NIX2 430 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms