RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 GTPBP4Q9BZE4 634 aaKnown RBP12.14□□□□□ -0.47
SMC4-210ENST00000469762 IGSF3O75054 1194 aa12.13□□□□□ -0.47
SMC4-210ENST00000469762 CHAF1AQ13111 956 aaPredicted RBP12.13□□□□□ -0.47
SMC4-210ENST00000469762 ATP5JP18859 108 aa12.13□□□□□ -0.47
SMC4-210ENST00000469762 CCZ1BP86790 482 aa12.13□□□□□ -0.47
SMC4-210ENST00000469762 CCZ1P86791 482 aaPredicted RBP12.13□□□□□ -0.47
SMC4-210ENST00000469762 PTPN12Q05209 780 aaKnown RBP12.13□□□□□ -0.47
SMC4-210ENST00000469762 PLEKHO1Q53GL0 409 aaPredicted RBP12.13□□□□□ -0.47
SMC4-210ENST00000469762 NSUN7Q8NE18 718 aaKnown RBP12.13□□□□□ -0.47
SMC4-210ENST00000469762 BICD2Q8TD16 824 aa12.13□□□□□ -0.47
SMC4-210ENST00000469762 RCOR1Q9UKL0 485 aa12.13□□□□□ -0.47
SMC4-210ENST00000469762 AXIN2Q9Y2T1 843 aa12.13□□□□□ -0.47
SMC4-210ENST00000469762 NEDD4P46934 1319 aa12.13□□□□□ -0.47
SMC4-210ENST00000469762 GCKRQ14397 625 aa12.13□□□□□ -0.47
SMC4-210ENST00000469762 ADAMTSL3P82987 1691 aa12.12□□□□□ -0.47
SMC4-210ENST00000469762 CEBPZQ03701 1054 aaKnown RBP12.12□□□□□ -0.47
SMC4-210ENST00000469762 ERCC4Q92889 916 aaPredicted RBP12.12□□□□□ -0.47
SMC4-210ENST00000469762 ABCC6O95255 1503 aa12.12□□□□□ -0.47
SMC4-210ENST00000469762 SALL1Q9NSC2 1324 aa12.12□□□□□ -0.47
SMC4-210ENST00000469762 DRC7Q8IY82 874 aa12.12□□□□□ -0.47
SMC4-210ENST00000469762 GOLGA6L4A6NEF3 574 aa12.12□□□□□ -0.47
SMC4-210ENST00000469762 TFCP2Q12800 502 aa12.12□□□□□ -0.47
SMC4-210ENST00000469762 TNNI3KQ59H18 835 aa12.12□□□□□ -0.47
SMC4-210ENST00000469762 NBPF11Q86T75 865 aa12.12□□□□□ -0.47
SMC4-210ENST00000469762 USP28Q96RU2 1077 aa12.12□□□□□ -0.47
SMC4-210ENST00000469762 COPRSQ9NQ92 184 aa12.12□□□□□ -0.47
SMC4-210ENST00000469762 FPGT-TNNI3KV9GXZ4 949 aa12.12□□□□□ -0.47
SMC4-210ENST00000469762 SLC39A6Q13433 755 aa12.11□□□□□ -0.47
SMC4-210ENST00000469762 ARHGEF25Q86VW2 580 aa12.11□□□□□ -0.47
SMC4-210ENST00000469762 MRFAP1L1Q96HT8 127 aa12.11□□□□□ -0.47
SMC4-210ENST00000469762 CHMP4AQ9BY43 222 aa12.11□□□□□ -0.47
SMC4-210ENST00000469762 SCN11AQ9UI33 1791 aa12.11□□□□□ -0.47
SMC4-210ENST00000469762 AFDNP55196 1824 aaKnown RBP12.11□□□□□ -0.47
SMC4-210ENST00000469762 AGXT2Q9BYV1 514 aa12.11□□□□□ -0.47
SMC4-210ENST00000469762 DDX41Q9UJV9 622 aaKnown RBP12.11□□□□□ -0.47
SMC4-210ENST00000469762 SLIT3O75094 1523 aa12.11□□□□□ -0.47
SMC4-210ENST00000469762 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.11□□□□□ -0.47
SMC4-210ENST00000469762 PFKFB2O60825 505 aa12.11□□□□□ -0.47
SMC4-210ENST00000469762 AMOTQ4VCS5 1084 aa12.11□□□□□ -0.47
SMC4-210ENST00000469762 DBNDD2Q9BQY9 259 aa12.11□□□□□ -0.47
SMC4-210ENST00000469762 LMTK3Q96Q04 1460 aa12.11□□□□□ -0.47
SMC4-210ENST00000469762 PPFIA3O75145 1194 aa12.11□□□□□ -0.47
SMC4-210ENST00000469762 FEZ1Q99689 392 aa12.11□□□□□ -0.47
SMC4-210ENST00000469762 BCL11BQ9C0K0 894 aaPredicted RBP12.11□□□□□ -0.47
SMC4-210ENST00000469762 ZSCAN16Q9H4T2 348 aaPredicted RBP12.11□□□□□ -0.47
SMC4-210ENST00000469762 KDM6AO15550 1401 aaPredicted RBP12.1□□□□□ -0.47
SMC4-210ENST00000469762 EXOSC10Q01780 885 aaKnown RBP12.1□□□□□ -0.47
SMC4-210ENST00000469762 CCAR1Q8IX12 1150 aaKnown RBP12.1□□□□□ -0.47
SMC4-210ENST00000469762 PAXBP1Q9Y5B6 917 aa12.1□□□□□ -0.47
SMC4-210ENST00000469762 FAM53CQ9NYF3 392 aa12.1□□□□□ -0.47
SMC4-210ENST00000469762 OGFRQ9NZT2 677 aa12.1□□□□□ -0.47
SMC4-210ENST00000469762 ARFGEF2Q9Y6D5 1785 aa12.1□□□□□ -0.47
SMC4-210ENST00000469762 NWD2Q9ULI1 1742 aa12.1□□□□□ -0.47
SMC4-210ENST00000469762 FOSBP53539 338 aa12.1□□□□□ -0.47
SMC4-210ENST00000469762 RABL6Q3YEC7 729 aaPredicted RBP12.1□□□□□ -0.47
SMC4-210ENST00000469762 CEP135Q66GS9 1140 aa12.1□□□□□ -0.47
SMC4-210ENST00000469762 XAGE3Q8WTP9 111 aa12.1□□□□□ -0.47
SMC4-210ENST00000469762 MYL6BP14649 208 aa12.09□□□□□ -0.47
SMC4-210ENST00000469762 PIP4K2AP48426 406 aaPredicted RBP12.09□□□□□ -0.47
SMC4-210ENST00000469762 KRT32Q14532 448 aa12.09□□□□□ -0.47
SMC4-210ENST00000469762 TPD52L1Q16890 204 aaPredicted RBP12.09□□□□□ -0.47
SMC4-210ENST00000469762 PLPPR3Q6T4P5 718 aa12.09□□□□□ -0.47
SMC4-210ENST00000469762 HAUS7Q99871 368 aa12.09□□□□□ -0.47
SMC4-210ENST00000469762 NCOA5Q9HCD5 579 aaKnown RBP12.09□□□□□ -0.47
SMC4-210ENST00000469762 GLI3P10071 1580 aa12.09□□□□□ -0.47
SMC4-210ENST00000469762 GCP02774 474 aa12.09□□□□□ -0.47
SMC4-210ENST00000469762 CASP7P55210 303 aa12.09□□□□□ -0.47
SMC4-210ENST00000469762 APOBRQ0VD83 1088 aa12.09□□□□□ -0.47
SMC4-210ENST00000469762 KMT5BQ4FZB7 885 aa12.09□□□□□ -0.47
SMC4-210ENST00000469762 C1orf141Q5JVX7 400 aa12.09□□□□□ -0.47
SMC4-210ENST00000469762 DDX46Q7L014 1031 aaKnown RBP12.09□□□□□ -0.47
SMC4-210ENST00000469762 COPS6Q7L5N1 327 aa12.09□□□□□ -0.47
SMC4-210ENST00000469762 MYD88Q99836 296 aa12.09□□□□□ -0.47
SMC4-210ENST00000469762 METTL22Q9BUU2 404 aaPredicted RBP12.09□□□□□ -0.47
SMC4-210ENST00000469762 ZNF215Q9UL58 517 aaPredicted RBP12.09□□□□□ -0.47
SMC4-210ENST00000469762 RFX7Q2KHR2 1363 aa12.09□□□□□ -0.47
SMC4-210ENST00000469762 FDPSP14324 419 aaKnown RBP12.09□□□□□ -0.47
SMC4-210ENST00000469762 MCMDC2Q4G0Z9 681 aa12.09□□□□□ -0.47
SMC4-210ENST00000469762 NAA16Q6N069 864 aaPredicted RBP12.09□□□□□ -0.47
SMC4-210ENST00000469762 RIC3Q7Z5B4 369 aa12.09□□□□□ -0.47
SMC4-210ENST00000469762 KIF18AQ8NI77 898 aa12.09□□□□□ -0.47
SMC4-210ENST00000469762 HDAC5Q9UQL6 1122 aa12.09□□□□□ -0.47
SMC4-210ENST00000469762 MORC2Q9Y6X9 1032 aaPredicted RBP12.09□□□□□ -0.47
SMC4-210ENST00000469762 PALLDQ8WX93 1383 aa12.08□□□□□ -0.47
SMC4-210ENST00000469762 DDX60Q8IY21 1712 aaKnown RBP12.08□□□□□ -0.48
SMC4-210ENST00000469762 PTPDC1A2A3K4 754 aa12.08□□□□□ -0.48
SMC4-210ENST00000469762 ZNF790Q6PG37 636 aa12.08□□□□□ -0.48
SMC4-210ENST00000469762 ANKRD24Q8TF21 1146 aa12.08□□□□□ -0.48
SMC4-210ENST00000469762 KCND1Q9NSA2 647 aa12.08□□□□□ -0.48
SMC4-210ENST00000469762 CFAP45Q9UL16 551 aa12.08□□□□□ -0.48
SMC4-210ENST00000469762 CAVIN2O95810 425 aa12.08□□□□□ -0.48
SMC4-210ENST00000469762 SKILP12757 684 aa12.08□□□□□ -0.48
SMC4-210ENST00000469762 STX1AQ16623 288 aa12.08□□□□□ -0.48
SMC4-210ENST00000469762 CCDC112Q8NEF3 446 aa12.08□□□□□ -0.48
SMC4-210ENST00000469762 LLPHQ9BRT6 129 aaKnown RBP12.08□□□□□ -0.48
SMC4-210ENST00000469762 U3KPZ7 1027 aaPredicted RBP12.08□□□□□ -0.48
SMC4-210ENST00000469762 CCDC69A6NI79 296 aa12.08□□□□□ -0.48
SMC4-210ENST00000469762 KIF20AO95235 890 aa12.08□□□□□ -0.48
SMC4-210ENST00000469762 FMR1NBQ8N0W7 255 aaPredicted RBP12.08□□□□□ -0.48
SMC4-210ENST00000469762 THEMISQ8N1K5 641 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms