RNA–Protein interactions for RNA: ENST00000469560.1

PMPCB-207, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 1,615 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-207ENST00000469560 TRAPPC3LQ5T215 181 aa8.83□□□□□ -1
PMPCB-207ENST00000469560 NUTM1Q86Y26 1132 aa8.83□□□□□ -1
PMPCB-207ENST00000469560 EFCAB3Q8N7B9 438 aa8.83□□□□□ -1
PMPCB-207ENST00000469560 DCTPP1Q9H773 170 aa8.83□□□□□ -1
PMPCB-207ENST00000469560 C9orf78Q9NZ63 289 aaPredicted RBP8.83□□□□□ -1
PMPCB-207ENST00000469560 PA2G4Q9UQ80 394 aaKnown RBP8.83□□□□□ -1
PMPCB-207ENST00000469560 PPP1R37O75864 691 aa8.82□□□□□ -1
PMPCB-207ENST00000469560 NEXNQ0ZGT2 675 aa8.82□□□□□ -1
PMPCB-207ENST00000469560 SLC15A2Q16348 729 aa8.82□□□□□ -1
PMPCB-207ENST00000469560 ERFEQ4G0M1 354 aa8.82□□□□□ -1
PMPCB-207ENST00000469560 CLEC4GQ6UXB4 293 aa8.82□□□□□ -1
PMPCB-207ENST00000469560 BICDL1Q6ZP65 573 aa8.82□□□□□ -1
PMPCB-207ENST00000469560 RPAP2Q8IXW5 612 aaPredicted RBP8.82□□□□□ -1
PMPCB-207ENST00000469560 C16orf71Q8IYS4 520 aaPredicted RBP8.82□□□□□ -1
PMPCB-207ENST00000469560 ZBTB38Q8NAP3 1195 aaPredicted RBP8.82□□□□□ -1
PMPCB-207ENST00000469560 OTUD7AQ8TE49 926 aaPredicted RBP8.82□□□□□ -1
PMPCB-207ENST00000469560 PDZRN3Q9UPQ7 1066 aa8.82□□□□□ -1
PMPCB-207ENST00000469560 NIP7Q9Y221 180 aaKnown RBP eCLIP8.82□□□□□ -1
PMPCB-207ENST00000469560 SMARCA5O60264 1052 aaPredicted RBP8.81□□□□□ -1
PMPCB-207ENST00000469560 CSF1RP07333 972 aa8.81□□□□□ -1
PMPCB-207ENST00000469560 HCLS1P14317 486 aaPredicted RBP8.81□□□□□ -1
PMPCB-207ENST00000469560 LMBR1LQ6UX01 489 aa8.81□□□□□ -1
PMPCB-207ENST00000469560 CENPQQ7L2Z9 268 aaPredicted RBP8.81□□□□□ -1
PMPCB-207ENST00000469560 PLA2G12BQ9BX93 195 aa8.81□□□□□ -1
PMPCB-207ENST00000469560 EXOC6BQ9Y2D4 811 aa8.81□□□□□ -1
PMPCB-207ENST00000469560 CARMIL3Q8ND23 1372 aa8.81□□□□□ -1
PMPCB-207ENST00000469560 QSER1Q2KHR3 1735 aa8.81□□□□□ -1
PMPCB-207ENST00000469560 LAMB2P55268 1798 aa8.81□□□□□ -1
PMPCB-207ENST00000469560 TAF1P21675 1872 aa8.81□□□□□ -1
PMPCB-207ENST00000469560 ST18O60284 1047 aa8.8□□□□□ -1
PMPCB-207ENST00000469560 PTPN12Q05209 780 aaKnown RBP8.8□□□□□ -1
PMPCB-207ENST00000469560 TTLL11Q8NHH1 800 aa8.8□□□□□ -1
PMPCB-207ENST00000469560 ZNF594Q96JF6 807 aaPredicted RBP8.8□□□□□ -1
PMPCB-207ENST00000469560 CCDC85AQ96PX6 553 aaPredicted RBP8.8□□□□□ -1
PMPCB-207ENST00000469560 CDHR2Q9BYE9 1310 aa8.8□□□□□ -1
PMPCB-207ENST00000469560 GPBP1L1Q9HC44 474 aaPredicted RBP8.8□□□□□ -1
PMPCB-207ENST00000469560 TRMT112Q9UI30 125 aaKnown RBP8.8□□□□□ -1
PMPCB-207ENST00000469560 NRXN2Q9P2S2 1712 aa8.8□□□□□ -1
PMPCB-207ENST00000469560 POLRMTO00411 1230 aaKnown RBP8.8□□□□□ -1
PMPCB-207ENST00000469560 SRGAP3O43295 1099 aa8.8□□□□□ -1
PMPCB-207ENST00000469560 SASH1O94885 1247 aa8.8□□□□□ -1
PMPCB-207ENST00000469560 RFC4P35249 363 aa8.8□□□□□ -1
PMPCB-207ENST00000469560 NUCB1Q02818 461 aa8.8□□□□□ -1
PMPCB-207ENST00000469560 HSP90AB3PQ58FF7 597 aa8.8□□□□□ -1
PMPCB-207ENST00000469560 PUS3Q9BZE2 481 aaKnown RBP8.8□□□□□ -1
PMPCB-207ENST00000469560 ZMYND15Q9H091 742 aa8.8□□□□□ -1
PMPCB-207ENST00000469560 RWDD1Q9H446 243 aaPredicted RBP8.8□□□□□ -1
PMPCB-207ENST00000469560 TFCP2L1Q9NZI6 479 aa8.8□□□□□ -1
PMPCB-207ENST00000469560 SALL3Q9BXA9 1300 aa8.79□□□□□ -1
PMPCB-207ENST00000469560 IRS4O14654 1257 aaPredicted RBP8.79□□□□□ -1
PMPCB-207ENST00000469560 ZPR1O75312 459 aa8.79□□□□□ -1
PMPCB-207ENST00000469560 BAG6P46379 1132 aa8.79□□□□□ -1
PMPCB-207ENST00000469560 FAM161AQ3B820 660 aa8.79□□□□□ -1
PMPCB-207ENST00000469560 SLC10A5Q5PT55 438 aa8.79□□□□□ -1
PMPCB-207ENST00000469560 MSL1Q68DK7 614 aa8.79□□□□□ -1
PMPCB-207ENST00000469560 ATG9AQ7Z3C6 839 aa8.79□□□□□ -1
PMPCB-207ENST00000469560 SLAIN1Q8ND83 568 aa8.79□□□□□ -1
PMPCB-207ENST00000469560 UTP14AQ9BVJ6 771 aaKnown RBP8.79□□□□□ -1
PMPCB-207ENST00000469560 GREM2Q9H772 168 aa8.79□□□□□ -1
PMPCB-207ENST00000469560 SEC31BQ9NQW1 1179 aa8.79□□□□□ -1
PMPCB-207ENST00000469560 NOP58Q9Y2X3 529 aaKnown RBP8.79□□□□□ -1
PMPCB-207ENST00000469560 ANKRD31Q8N7Z5 1873 aa8.79□□□□□ -1
PMPCB-207ENST00000469560 WTIPA6NIX2 430 aaPredicted RBP8.78□□□□□ -1
PMPCB-207ENST00000469560 SOCS7O14512 581 aa8.78□□□□□ -1
PMPCB-207ENST00000469560 LRRC24Q50LG9 513 aa8.78□□□□□ -1
PMPCB-207ENST00000469560 PARP10Q53GL7 1025 aa8.78□□□□□ -1
PMPCB-207ENST00000469560 PRR5LQ6MZQ0 368 aa8.78□□□□□ -1
PMPCB-207ENST00000469560 LRP5O75197 1615 aa8.78□□□□□ -1
PMPCB-207ENST00000469560 SH3TC1Q8TE82 1336 aa8.77□□□□□ -1
PMPCB-207ENST00000469560 MYH3P11055 1940 aa8.77□□□□□ -1.01
PMPCB-207ENST00000469560 APBB1O00213 710 aa8.77□□□□□ -1.01
PMPCB-207ENST00000469560 CTSWP56202 376 aa8.77□□□□□ -1.01
PMPCB-207ENST00000469560 IL27Q8NEV9 243 aa8.77□□□□□ -1.01
PMPCB-207ENST00000469560 LNPKQ9C0E8 428 aa8.77□□□□□ -1.01
PMPCB-207ENST00000469560 COPRSQ9NQ92 184 aa8.77□□□□□ -1.01
PMPCB-207ENST00000469560 PDE8AO60658 829 aa8.76□□□□□ -1.01
PMPCB-207ENST00000469560 SERPINB2P05120 415 aa8.76□□□□□ -1.01
PMPCB-207ENST00000469560 ANKRD45Q5TZF3 282 aa8.76□□□□□ -1.01
PMPCB-207ENST00000469560 CHD1LQ86WJ1 897 aa8.76□□□□□ -1.01
PMPCB-207ENST00000469560 CCDC125Q86Z20 511 aa8.76□□□□□ -1.01
PMPCB-207ENST00000469560 SETDB2Q96T68 719 aa8.76□□□□□ -1.01
PMPCB-207ENST00000469560 SIL1Q9H173 461 aa8.76□□□□□ -1.01
PMPCB-207ENST00000469560 CHMP4BQ9H444 224 aaKnown RBP8.76□□□□□ -1.01
PMPCB-207ENST00000469560 SURF6O75683 361 aaKnown RBP8.76□□□□□ -1.01
PMPCB-207ENST00000469560 ZNF652Q9Y2D9 606 aa8.76□□□□□ -1.01
PMPCB-207ENST00000469560 RIC1Q4ADV7 1423 aa8.75□□□□□ -1.01
PMPCB-207ENST00000469560 SNAP23O00161 211 aa8.75□□□□□ -1.01
PMPCB-207ENST00000469560 MMP10P09238 476 aa8.75□□□□□ -1.01
PMPCB-207ENST00000469560 ITGA6P23229 1130 aa8.75□□□□□ -1.01
PMPCB-207ENST00000469560 SF3B3Q15393 1217 aaKnown RBP8.75□□□□□ -1.01
PMPCB-207ENST00000469560 TSHZ3Q63HK5 1081 aa8.75□□□□□ -1.01
PMPCB-207ENST00000469560 NPM2Q86SE8 214 aaKnown RBP8.75□□□□□ -1.01
PMPCB-207ENST00000469560 PLEKHM2Q8IWE5 1019 aa8.75□□□□□ -1.01
PMPCB-207ENST00000469560 RHPN1Q8TCX5 695 aa8.75□□□□□ -1.01
PMPCB-207ENST00000469560 GCC1Q96CN9 775 aa8.75□□□□□ -1.01
PMPCB-207ENST00000469560 IL1RAPL2Q9NP60 686 aa8.75□□□□□ -1.01
PMPCB-207ENST00000469560 STK32BQ9NY57 414 aa8.75□□□□□ -1.01
PMPCB-207ENST00000469560 TLR7Q9NYK1 1049 aaKnown RBP8.75□□□□□ -1.01
PMPCB-207ENST00000469560 RIPOR2Q9Y4F9 1068 aa8.75□□□□□ -1.01
PMPCB-207ENST00000469560 COL11A2P13942 1736 aaPredicted RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms