RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 GGA1Q9UJY5 639 aa23.22■■□□□ 1.31
PHGDH-204ENST00000469443 CSF1RP07333 972 aa23.21■■□□□ 1.31
PHGDH-204ENST00000469443 MRPL50Q8N5N7 158 aaKnown RBP23.21■■□□□ 1.31
PHGDH-204ENST00000469443 GPR101Q96P66 508 aaPredicted RBP23.21■■□□□ 1.31
PHGDH-204ENST00000469443 ZC3H12CQ9C0D7 883 aaKnown RBP23.21■■□□□ 1.31
PHGDH-204ENST00000469443 DBNDD1Q9H9R9 158 aa23.21■■□□□ 1.31
PHGDH-204ENST00000469443 GPRC5DQ9NZD1 345 aa23.21■■□□□ 1.31
PHGDH-204ENST00000469443 XDHP47989 1333 aa23.21■■□□□ 1.31
PHGDH-204ENST00000469443 GMPSP49915 693 aaPredicted RBP23.2■■□□□ 1.3
PHGDH-204ENST00000469443 TRMT2AQ8IZ69 625 aaKnown RBP23.2■■□□□ 1.3
PHGDH-204ENST00000469443 BSDC1Q9NW68 430 aaPredicted RBP23.2■■□□□ 1.3
PHGDH-204ENST00000469443 PASKQ96RG2 1323 aa23.19■■□□□ 1.3
PHGDH-204ENST00000469443 ECE2O60344 883 aa23.19■■□□□ 1.3
PHGDH-204ENST00000469443 ALDH1L1O75891 902 aa23.19■■□□□ 1.3
PHGDH-204ENST00000469443 FAM161AQ3B820 660 aa23.19■■□□□ 1.3
PHGDH-204ENST00000469443 SLC4A10Q6U841 1118 aa23.19■■□□□ 1.3
PHGDH-204ENST00000469443 A0A1B0GUL6 1792 aa23.19■■□□□ 1.3
PHGDH-204ENST00000469443 ITGA6P23229 1130 aa23.18■■□□□ 1.3
PHGDH-204ENST00000469443 ATP2B4P23634 1241 aa23.18■■□□□ 1.3
PHGDH-204ENST00000469443 IGHMBP2P38935 993 aaKnown RBP23.18■■□□□ 1.3
PHGDH-204ENST00000469443 DOK7Q18PE1 504 aa23.18■■□□□ 1.3
PHGDH-204ENST00000469443 DIEXFQ68CQ4 756 aaKnown RBP23.18■■□□□ 1.3
PHGDH-204ENST00000469443 USP50Q70EL3 339 aaPredicted RBP23.18■■□□□ 1.3
PHGDH-204ENST00000469443 KLRG1Q96E93 195 aa23.18■■□□□ 1.3
PHGDH-204ENST00000469443 BCL2L13Q9BXK5 485 aa23.18■■□□□ 1.3
PHGDH-204ENST00000469443 SRCIN1Q9C0H9 1055 aa23.18■■□□□ 1.3
PHGDH-204ENST00000469443 ADARB2Q9NS39 739 aaKnown RBP23.18■■□□□ 1.3
PHGDH-204ENST00000469443 MINPP1Q9UNW1 487 aa23.18■■□□□ 1.3
PHGDH-204ENST00000469443 TRPM7Q96QT4 1865 aa23.17■■□□□ 1.3
PHGDH-204ENST00000469443 GRM8O00222 908 aa23.17■■□□□ 1.3
PHGDH-204ENST00000469443 ITGBL1O95965 494 aaPredicted RBP23.17■■□□□ 1.3
PHGDH-204ENST00000469443 SSH1Q8WYL5 1049 aa23.17■■□□□ 1.3
PHGDH-204ENST00000469443 PTPRCP08575 1304 aa23.16■■□□□ 1.3
PHGDH-204ENST00000469443 FOXO4P98177 505 aa23.16■■□□□ 1.3
PHGDH-204ENST00000469443 MAP1SQ66K74 1059 aaPredicted RBP23.16■■□□□ 1.3
PHGDH-204ENST00000469443 C9orf78Q9NZ63 289 aaPredicted RBP23.16■■□□□ 1.3
PHGDH-204ENST00000469443 G3V3G9 751 aa23.15■■□□□ 1.3
PHGDH-204ENST00000469443 PSMD14O00487 310 aa23.15■■□□□ 1.3
PHGDH-204ENST00000469443 ALDH1L2Q3SY69 923 aa23.15■■□□□ 1.3
PHGDH-204ENST00000469443 DCAF8Q5TAQ9 597 aa23.15■■□□□ 1.3
PHGDH-204ENST00000469443 CNTROBQ8N137 903 aa23.15■■□□□ 1.3
PHGDH-204ENST00000469443 CREBZFQ9NS37 354 aa23.15■■□□□ 1.3
PHGDH-204ENST00000469443 ANKRD18BA2A2Z9 1011 aa23.14■■□□□ 1.29
PHGDH-204ENST00000469443 MIER1Q8N108 512 aa23.14■■□□□ 1.29
PHGDH-204ENST00000469443 MPHOSPH8Q99549 860 aa23.14■■□□□ 1.29
PHGDH-204ENST00000469443 POLR2AP24928 1970 aaKnown RBP23.13■■□□□ 1.29
PHGDH-204ENST00000469443 CCT4P50991 539 aaKnown RBP23.13■■□□□ 1.29
PHGDH-204ENST00000469443 DPF2Q92785 391 aa23.13■■□□□ 1.29
PHGDH-204ENST00000469443 KCNQ5Q9NR82 932 aa23.13■■□□□ 1.29
PHGDH-204ENST00000469443 CNOT7Q9UIV1 285 aaKnown RBP23.13■■□□□ 1.29
PHGDH-204ENST00000469443 MED23Q9ULK4 1368 aa23.13■■□□□ 1.29
PHGDH-204ENST00000469443 CT47B1P0C2W7 299 aaPredicted RBP23.12■■□□□ 1.29
PHGDH-204ENST00000469443 LMBR1LQ6UX01 489 aa23.12■■□□□ 1.29
PHGDH-204ENST00000469443 ZBTB12Q9Y330 459 aaPredicted RBP23.12■■□□□ 1.29
PHGDH-204ENST00000469443 CHMP3Q9Y3E7 222 aa23.12■■□□□ 1.29
PHGDH-204ENST00000469443 ZNF646O15015 1829 aaPredicted RBP23.12■■□□□ 1.29
PHGDH-204ENST00000469443 H7C1D1 291 aa23.11■■□□□ 1.29
PHGDH-204ENST00000469443 RPS12P25398 132 aaKnown RBP23.11■■□□□ 1.29
PHGDH-204ENST00000469443 IFIT5Q13325 482 aaKnown RBP23.11■■□□□ 1.29
PHGDH-204ENST00000469443 EPHA10Q5JZY3 1008 aa23.11■■□□□ 1.29
PHGDH-204ENST00000469443 ANKRD2Q9GZV1 360 aa23.11■■□□□ 1.29
PHGDH-204ENST00000469443 SMC4Q9NTJ3 1288 aa23.11■■□□□ 1.29
PHGDH-204ENST00000469443 LEMD3Q9Y2U8 911 aa23.11■■□□□ 1.29
PHGDH-204ENST00000469443 WTIPA6NIX2 430 aaPredicted RBP23.1■■□□□ 1.29
PHGDH-204ENST00000469443 VIL1P09327 827 aaKnown RBP23.1■■□□□ 1.29
PHGDH-204ENST00000469443 MICALL2Q8IY33 904 aa23.1■■□□□ 1.29
PHGDH-204ENST00000469443 JMYQ8N9B5 988 aa23.1■■□□□ 1.29
PHGDH-204ENST00000469443 UTYO14607 1347 aa23.09■■□□□ 1.29
PHGDH-204ENST00000469443 SHTN1A0MZ66 631 aa23.09■■□□□ 1.29
PHGDH-204ENST00000469443 TMEM88BA6NKF7 163 aa23.09■■□□□ 1.29
PHGDH-204ENST00000469443 NBPF7P0C2Y1 421 aaPredicted RBP23.08■■□□□ 1.29
PHGDH-204ENST00000469443 PODNQ7Z5L7 613 aa23.08■■□□□ 1.29
PHGDH-204ENST00000469443 TRPM4Q8TD43 1214 aa23.08■■□□□ 1.29
PHGDH-204ENST00000469443 ZNF609O15014 1411 aa23.08■■□□□ 1.28
PHGDH-204ENST00000469443 ZNF804BA4D1E1 1349 aa23.08■■□□□ 1.28
PHGDH-204ENST00000469443 HIRAP54198 1017 aaPredicted RBP23.07■■□□□ 1.28
PHGDH-204ENST00000469443 CHRNDQ07001 517 aa23.07■■□□□ 1.28
PHGDH-204ENST00000469443 CCDC57Q2TAC2 916 aa23.07■■□□□ 1.28
PHGDH-204ENST00000469443 ZC3H15Q8WU90 426 aaKnown RBP23.07■■□□□ 1.28
PHGDH-204ENST00000469443 SUCLG2Q96I99 432 aa23.07■■□□□ 1.28
PHGDH-204ENST00000469443 PGAP2Q9UHJ9 254 aa23.07■■□□□ 1.28
PHGDH-204ENST00000469443 KAZALD1Q96I82 304 aa23.06■■□□□ 1.28
PHGDH-204ENST00000469443 PCNTO95613 3336 aa23.06■■□□□ 1.28
PHGDH-204ENST00000469443 TAF7LQ5H9L4 462 aa23.05■■□□□ 1.28
PHGDH-204ENST00000469443 RSBN1LQ6PCB5 846 aaPredicted RBP23.05■■□□□ 1.28
PHGDH-204ENST00000469443 AGBL3Q8NEM8 1001 aa23.05■■□□□ 1.28
PHGDH-204ENST00000469443 USP17L3A6NCW0 530 aa23.04■■□□□ 1.28
PHGDH-204ENST00000469443 USP17L4A6NCW7 530 aa23.04■■□□□ 1.28
PHGDH-204ENST00000469443 KCNJ4P48050 445 aa23.04■■□□□ 1.28
PHGDH-204ENST00000469443 BRPF1P55201 1214 aaPredicted RBP23.04■■□□□ 1.28
PHGDH-204ENST00000469443 USP17L1Q7RTZ2 530 aa23.04■■□□□ 1.28
PHGDH-204ENST00000469443 SAMD7Q7Z3H4 446 aa23.04■■□□□ 1.28
PHGDH-204ENST00000469443 TXNRD3Q86VQ6 643 aa23.04■■□□□ 1.28
PHGDH-204ENST00000469443 ZNF594Q96JF6 807 aaPredicted RBP23.04■■□□□ 1.28
PHGDH-204ENST00000469443 COA1Q9GZY4 146 aa23.04■■□□□ 1.28
PHGDH-204ENST00000469443 MKRN1Q9UHC7 482 aaKnown RBP23.04■■□□□ 1.28
PHGDH-204ENST00000469443 CNTNAP1P78357 1384 aa23.03■■□□□ 1.28
PHGDH-204ENST00000469443 FMR1Q06787 632 aaKnown RBP eCLIP23.03■■□□□ 1.282e-20■■■□□ 17.7
PHGDH-204ENST00000469443 TBC1D10BQ4KMP7 808 aaPredicted RBP23.03■■□□□ 1.28
PHGDH-204ENST00000469443 LDHAL6AQ6ZMR3 332 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms