RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 ASTN2O75129 1339 aaPredicted RBP16.77■□□□□ 0.28
TRAPPC12-216ENST00000469400 VIL1P09327 827 aaKnown RBP16.77■□□□□ 0.28
TRAPPC12-216ENST00000469400 TMPOP42166 694 aaKnown RBP16.77■□□□□ 0.28
TRAPPC12-216ENST00000469400 LMOD3Q0VAK6 560 aa16.77■□□□□ 0.28
TRAPPC12-216ENST00000469400 ANKRD13DQ6ZTN6 518 aa16.77■□□□□ 0.28
TRAPPC12-216ENST00000469400 TBC1D16Q8TBP0 767 aa16.77■□□□□ 0.28
TRAPPC12-216ENST00000469400 GGA3Q9NZ52 723 aa16.77■□□□□ 0.28
TRAPPC12-216ENST00000469400 POLR2AP24928 1970 aaKnown RBP16.77■□□□□ 0.27
TRAPPC12-216ENST00000469400 ATP5J2-PTCD1G3V325 749 aa16.76■□□□□ 0.27
TRAPPC12-216ENST00000469400 RTL5Q5HYW3 569 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC12-216ENST00000469400 CDCA5Q96FF9 252 aa16.76■□□□□ 0.27
TRAPPC12-216ENST00000469400 COL4A1P02462 1669 aa16.75■□□□□ 0.27
TRAPPC12-216ENST00000469400 CHL1O00533 1208 aa16.75■□□□□ 0.27
TRAPPC12-216ENST00000469400 RPS8P62241 208 aaKnown RBP16.75■□□□□ 0.27
TRAPPC12-216ENST00000469400 CTU1Q7Z7A3 348 aaKnown RBP16.75■□□□□ 0.27
TRAPPC12-216ENST00000469400 ZC3H12CQ9C0D7 883 aaKnown RBP16.75■□□□□ 0.27
TRAPPC12-216ENST00000469400 DDX60Q8IY21 1712 aaKnown RBP16.74■□□□□ 0.27
TRAPPC12-216ENST00000469400 IRS4O14654 1257 aaPredicted RBP16.74■□□□□ 0.27
TRAPPC12-216ENST00000469400 HDGFL1Q5TGJ6 251 aa16.74■□□□□ 0.27
TRAPPC12-216ENST00000469400 ZNF280AP59817 542 aaPredicted RBP16.73■□□□□ 0.27
TRAPPC12-216ENST00000469400 SCARF1Q14162 830 aa16.73■□□□□ 0.27
TRAPPC12-216ENST00000469400 ANGEL2Q5VTE6 544 aaKnown RBP16.73■□□□□ 0.27
TRAPPC12-216ENST00000469400 RASAL3Q86YV0 1011 aa16.73■□□□□ 0.27
TRAPPC12-216ENST00000469400 REM2Q8IYK8 340 aaPredicted RBP16.73■□□□□ 0.27
TRAPPC12-216ENST00000469400 PODXL2Q9NZ53 605 aa16.73■□□□□ 0.27
TRAPPC12-216ENST00000469400 LAS1LQ9Y4W2 734 aaKnown RBP16.73■□□□□ 0.27
TRAPPC12-216ENST00000469400 G3V3G9 751 aa16.72■□□□□ 0.27
TRAPPC12-216ENST00000469400 UFL1O94874 794 aa16.72■□□□□ 0.27
TRAPPC12-216ENST00000469400 TRIM28Q13263 835 aaKnown RBP16.72■□□□□ 0.27
TRAPPC12-216ENST00000469400 NEUROD2Q15784 382 aa16.72■□□□□ 0.27
TRAPPC12-216ENST00000469400 DCAF8Q5TAQ9 597 aa16.72■□□□□ 0.27
TRAPPC12-216ENST00000469400 DBF4Q9UBU7 674 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC12-216ENST00000469400 FKBP1BP68106 108 aa16.71■□□□□ 0.27
TRAPPC12-216ENST00000469400 RSBN1LQ6PCB5 846 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC12-216ENST00000469400 AGBL3Q8NEM8 1001 aa16.71■□□□□ 0.27
TRAPPC12-216ENST00000469400 SEC31BQ9NQW1 1179 aa16.71■□□□□ 0.27
TRAPPC12-216ENST00000469400 ANKIB1Q9P2G1 1089 aa16.71■□□□□ 0.27
TRAPPC12-216ENST00000469400 HPS5Q9UPZ3 1129 aa16.71■□□□□ 0.27
TRAPPC12-216ENST00000469400 SCN9AQ15858 1988 aa16.7■□□□□ 0.26
TRAPPC12-216ENST00000469400 HOXB7P09629 217 aa16.7■□□□□ 0.26
TRAPPC12-216ENST00000469400 PRPF38BQ5VTL8 546 aaKnown RBP16.7■□□□□ 0.26
TRAPPC12-216ENST00000469400 HYPKQ9NX55 129 aa16.7■□□□□ 0.26
TRAPPC12-216ENST00000469400 GGA1Q9UJY5 639 aa16.7■□□□□ 0.26
TRAPPC12-216ENST00000469400 AKAP11Q9UKA4 1901 aa16.7■□□□□ 0.26
TRAPPC12-216ENST00000469400 MOB2Q70IA6 237 aa16.69■□□□□ 0.26
TRAPPC12-216ENST00000469400 CCDC146Q8IYE0 955 aa16.69■□□□□ 0.26
TRAPPC12-216ENST00000469400 ZBTB38Q8NAP3 1195 aaPredicted RBP16.69■□□□□ 0.26
TRAPPC12-216ENST00000469400 GMLQ99445 158 aa16.69■□□□□ 0.26
TRAPPC12-216ENST00000469400 TRIM35Q9UPQ4 493 aa16.69■□□□□ 0.26
TRAPPC12-216ENST00000469400 ZNF609O15014 1411 aa16.69■□□□□ 0.26
TRAPPC12-216ENST00000469400 USP17L8P0C7I0 530 aa16.68■□□□□ 0.26
TRAPPC12-216ENST00000469400 PKN2Q16513 984 aaKnown RBP16.68■□□□□ 0.26
TRAPPC12-216ENST00000469400 MYOZ2Q9NPC6 264 aa16.68■□□□□ 0.26
TRAPPC12-216ENST00000469400 SCAF8Q9UPN6 1271 aaKnown RBP16.68■□□□□ 0.26
TRAPPC12-216ENST00000469400 PITPNM2Q9BZ72 1349 aa16.68■□□□□ 0.26
TRAPPC12-216ENST00000469400 TBC1D8O95759 1140 aa16.67■□□□□ 0.26
TRAPPC12-216ENST00000469400 DUSP27Q5VZP5 1158 aa16.67■□□□□ 0.26
TRAPPC12-216ENST00000469400 ZNF296Q8WUU4 475 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC12-216ENST00000469400 HDAC9Q9UKV0 1011 aa16.67■□□□□ 0.26
TRAPPC12-216ENST00000469400 UBE2Q2LH0YL09 131 aa16.66■□□□□ 0.26
TRAPPC12-216ENST00000469400 HSP90B1P14625 803 aaKnown RBP16.66■□□□□ 0.26
TRAPPC12-216ENST00000469400 CCDC152Q4G0S7 254 aa16.66■□□□□ 0.26
TRAPPC12-216ENST00000469400 RIC3Q7Z5B4 369 aa16.66■□□□□ 0.26
TRAPPC12-216ENST00000469400 PAPPA2Q9BXP8 1791 aa16.65■□□□□ 0.26
TRAPPC12-216ENST00000469400 USP17L3A6NCW0 530 aa16.65■□□□□ 0.26
TRAPPC12-216ENST00000469400 USP17L4A6NCW7 530 aa16.65■□□□□ 0.26
TRAPPC12-216ENST00000469400 RALBP1Q15311 655 aa16.65■□□□□ 0.26
TRAPPC12-216ENST00000469400 PRAMEF18Q5VWM3 479 aa16.65■□□□□ 0.26
TRAPPC12-216ENST00000469400 USP17L1Q7RTZ2 530 aa16.65■□□□□ 0.26
TRAPPC12-216ENST00000469400 CCDC85AQ96PX6 553 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC12-216ENST00000469400 GOLGA2Q08379 1002 aa16.64■□□□□ 0.25
TRAPPC12-216ENST00000469400 PODNQ7Z5L7 613 aa16.64■□□□□ 0.25
TRAPPC12-216ENST00000469400 JARID2Q92833 1246 aaPredicted RBP16.64■□□□□ 0.25
TRAPPC12-216ENST00000469400 MYD88Q99836 296 aa16.64■□□□□ 0.25
TRAPPC12-216ENST00000469400 XDHP47989 1333 aa16.64■□□□□ 0.25
TRAPPC12-216ENST00000469400 PDE8AO60658 829 aa16.63■□□□□ 0.25
TRAPPC12-216ENST00000469400 PCCAP05165 728 aaPredicted RBP16.63■□□□□ 0.25
TRAPPC12-216ENST00000469400 ATP2B4P23634 1241 aa16.63■□□□□ 0.25
TRAPPC12-216ENST00000469400 TM4SF4P48230 202 aa16.63■□□□□ 0.25
TRAPPC12-216ENST00000469400 NBPF9Q3BBW0 867 aa16.63■□□□□ 0.25
TRAPPC12-216ENST00000469400 ANKRD18AQ8IVF6 992 aa16.63■□□□□ 0.25
TRAPPC12-216ENST00000469400 CCDC191Q8NCU4 936 aa16.63■□□□□ 0.25
TRAPPC12-216ENST00000469400 RUNDC1Q96C34 613 aa16.63■□□□□ 0.25
TRAPPC12-216ENST00000469400 PHAXQ9H814 394 aaKnown RBP16.63■□□□□ 0.25
TRAPPC12-216ENST00000469400 WTIPA6NIX2 430 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC12-216ENST00000469400 GPR25O00155 361 aa16.62■□□□□ 0.25
TRAPPC12-216ENST00000469400 TTLL12Q14166 644 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC12-216ENST00000469400 NOM1Q5C9Z4 860 aaKnown RBP16.62■□□□□ 0.25
TRAPPC12-216ENST00000469400 MBIPQ9NS73 344 aa16.62■□□□□ 0.25
TRAPPC12-216ENST00000469400 MKRN3Q13064 507 aaKnown RBP16.61■□□□□ 0.25
TRAPPC12-216ENST00000469400 MXD3Q9BW11 206 aa16.61■□□□□ 0.25
TRAPPC12-216ENST00000469400 CWC25Q9NXE8 425 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC12-216ENST00000469400 WNT10BO00744 389 aa16.6■□□□□ 0.25
TRAPPC12-216ENST00000469400 DACT2Q5SW24 774 aa16.6■□□□□ 0.25
TRAPPC12-216ENST00000469400 FBXO46Q6PJ61 603 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC12-216ENST00000469400 NF2P35240 595 aa16.59■□□□□ 0.25
TRAPPC12-216ENST00000469400 OGFOD1Q8N543 542 aa16.59■□□□□ 0.25
TRAPPC12-216ENST00000469400 R3HDMLQ9H3Y0 253 aa16.59■□□□□ 0.25
TRAPPC12-216ENST00000469400 PSME4Q14997 1843 aa16.59■□□□□ 0.25
TRAPPC12-216ENST00000469400 ELL2O00472 640 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms