RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 HSP90AA1P07900 732 aaKnown RBP11.28□□□□□ -0.6
SMC1A-205ENST00000469129 ADRA2BP18089 450 aa11.28□□□□□ -0.6
SMC1A-205ENST00000469129 MCM2P49736 904 aa11.28□□□□□ -0.6
SMC1A-205ENST00000469129 METTL24Q5JXM2 366 aa11.28□□□□□ -0.6
SMC1A-205ENST00000469129 CCDC158Q5M9N0 1113 aa11.28□□□□□ -0.6
SMC1A-205ENST00000469129 GORABQ5T7V8 394 aa11.28□□□□□ -0.6
SMC1A-205ENST00000469129 SUSD4Q5VX71 490 aa11.28□□□□□ -0.6
SMC1A-205ENST00000469129 CWC27Q6UX04 472 aaKnown RBP11.28□□□□□ -0.6
SMC1A-205ENST00000469129 LDHAL6AQ6ZMR3 332 aa11.28□□□□□ -0.6
SMC1A-205ENST00000469129 SNRKQ9NRH2 765 aa11.28□□□□□ -0.6
SMC1A-205ENST00000469129 CHD4Q14839 1912 aa11.28□□□□□ -0.6
SMC1A-205ENST00000469129 CCDC171Q6TFL3 1326 aa11.28□□□□□ -0.6
SMC1A-205ENST00000469129 MAST2Q6P0Q8 1798 aa11.28□□□□□ -0.6
SMC1A-205ENST00000469129 MYO5AQ9Y4I1 1855 aaKnown RBP11.27□□□□□ -0.6
SMC1A-205ENST00000469129 QSER1Q2KHR3 1735 aa11.27□□□□□ -0.61
SMC1A-205ENST00000469129 IFIT1P09914 478 aaKnown RBP11.27□□□□□ -0.61
SMC1A-205ENST00000469129 HSPA4P34932 840 aa11.27□□□□□ -0.61
SMC1A-205ENST00000469129 ATP2B3Q16720 1220 aa11.27□□□□□ -0.61
SMC1A-205ENST00000469129 SLC27A3Q5K4L6 730 aa11.27□□□□□ -0.61
SMC1A-205ENST00000469129 TTC39AQ5SRH9 613 aa11.27□□□□□ -0.61
SMC1A-205ENST00000469129 DNAJC2Q99543 621 aaKnown RBP11.27□□□□□ -0.61
SMC1A-205ENST00000469129 PUS3Q9BZE2 481 aaKnown RBP11.27□□□□□ -0.61
SMC1A-205ENST00000469129 LSG1Q9H089 658 aaKnown RBP11.27□□□□□ -0.61
SMC1A-205ENST00000469129 CIZ1Q9ULV3 898 aaPredicted RBP11.27□□□□□ -0.61
SMC1A-205ENST00000469129 TAF1P21675 1872 aa11.27□□□□□ -0.61
SMC1A-205ENST00000469129 IGHMBP2P38935 993 aaKnown RBP11.26□□□□□ -0.61
SMC1A-205ENST00000469129 NMIQ13287 307 aaPredicted RBP11.26□□□□□ -0.61
SMC1A-205ENST00000469129 EZH2Q15910 746 aaKnown RBP11.26□□□□□ -0.61
SMC1A-205ENST00000469129 KBTBD3Q8NAB2 608 aa11.26□□□□□ -0.61
SMC1A-205ENST00000469129 CCDC85AQ96PX6 553 aaPredicted RBP11.26□□□□□ -0.61
SMC1A-205ENST00000469129 CDC5LQ99459 802 aaKnown RBP11.26□□□□□ -0.61
SMC1A-205ENST00000469129 SLKQ9H2G2 1235 aaPredicted RBP11.26□□□□□ -0.61
SMC1A-205ENST00000469129 PAG1Q9NWQ8 432 aa11.26□□□□□ -0.61
SMC1A-205ENST00000469129 CHMP5Q9NZZ3 219 aa11.26□□□□□ -0.61
SMC1A-205ENST00000469129 RIPOR2Q9Y4F9 1068 aa11.26□□□□□ -0.61
SMC1A-205ENST00000469129 CARMIL3Q8ND23 1372 aa11.26□□□□□ -0.61
SMC1A-205ENST00000469129 CCDC88AQ3V6T2 1871 aa11.25□□□□□ -0.61
SMC1A-205ENST00000469129 PUM3Q15397 648 aaKnown RBP11.25□□□□□ -0.61
SMC1A-205ENST00000469129 RNF20Q5VTR2 975 aa11.25□□□□□ -0.61
SMC1A-205ENST00000469129 SYNE4Q8N205 404 aa11.25□□□□□ -0.61
SMC1A-205ENST00000469129 XAGE2Q96GT9 111 aa11.25□□□□□ -0.61
SMC1A-205ENST00000469129 ZNF512BQ96KM6 892 aaPredicted RBP11.25□□□□□ -0.61
SMC1A-205ENST00000469129 CAMKK2Q96RR4 588 aa11.25□□□□□ -0.61
SMC1A-205ENST00000469129 MPHOSPH8Q99549 860 aa11.25□□□□□ -0.61
SMC1A-205ENST00000469129 KIAA1551Q9HCM1 1747 aa11.25□□□□□ -0.61
SMC1A-205ENST00000469129 FAM177BA6PVY3 158 aa11.24□□□□□ -0.61
SMC1A-205ENST00000469129 PDE8BO95263 885 aa11.24□□□□□ -0.61
SMC1A-205ENST00000469129 ZFYP08048 801 aaPredicted RBP11.24□□□□□ -0.61
SMC1A-205ENST00000469129 UQCRFS1P1P0C7P4 283 aa11.24□□□□□ -0.61
SMC1A-205ENST00000469129 SLC5A1P13866 664 aa11.24□□□□□ -0.61
SMC1A-205ENST00000469129 HCLS1P14317 486 aaPredicted RBP11.24□□□□□ -0.61
SMC1A-205ENST00000469129 ZKSCAN1P17029 563 aaPredicted RBP11.24□□□□□ -0.61
SMC1A-205ENST00000469129 GTF2E1P29083 439 aaPredicted RBP11.24□□□□□ -0.61
SMC1A-205ENST00000469129 KCNJ4P48050 445 aa11.24□□□□□ -0.61
SMC1A-205ENST00000469129 USPL1Q5W0Q7 1092 aa11.24□□□□□ -0.61
SMC1A-205ENST00000469129 PTF1AQ7RTS3 328 aa11.24□□□□□ -0.61
SMC1A-205ENST00000469129 VGLL2Q8N8G2 317 aa11.24□□□□□ -0.61
SMC1A-205ENST00000469129 SETDB2Q96T68 719 aa11.24□□□□□ -0.61
SMC1A-205ENST00000469129 ANTXR1Q9H6X2 564 aa11.24□□□□□ -0.61
SMC1A-205ENST00000469129 HMG20BQ9P0W2 317 aa11.24□□□□□ -0.61
SMC1A-205ENST00000469129 DUOX1Q9NRD9 1551 aa11.24□□□□□ -0.61
SMC1A-205ENST00000469129 NRXN2Q9P2S2 1712 aa11.23□□□□□ -0.61
SMC1A-205ENST00000469129 A0A0D9SFI3 127 aa11.23□□□□□ -0.61
SMC1A-205ENST00000469129 RFC4P35249 363 aa11.23□□□□□ -0.61
SMC1A-205ENST00000469129 TIMM10P62072 90 aa11.23□□□□□ -0.61
SMC1A-205ENST00000469129 TTF1Q15361 905 aaPredicted RBP11.23□□□□□ -0.61
SMC1A-205ENST00000469129 SF3B3Q15393 1217 aaKnown RBP11.23□□□□□ -0.61
SMC1A-205ENST00000469129 TRAPPC3LQ5T215 181 aa11.23□□□□□ -0.61
SMC1A-205ENST00000469129 LPIN2Q92539 896 aa11.23□□□□□ -0.61
SMC1A-205ENST00000469129 IL25Q9H293 177 aa11.23□□□□□ -0.61
SMC1A-205ENST00000469129 HELLSQ9NRZ9 838 aa11.23□□□□□ -0.61
SMC1A-205ENST00000469129 LRRC37AA6NMS7 1700 aa11.23□□□□□ -0.61
SMC1A-205ENST00000469129 GOLIM4O00461 696 aa11.22□□□□□ -0.61
SMC1A-205ENST00000469129 CD2BP2O95400 341 aaKnown RBP11.22□□□□□ -0.61
SMC1A-205ENST00000469129 SSFA2P28290 1259 aa11.22□□□□□ -0.61
SMC1A-205ENST00000469129 NEK4P51957 841 aa11.22□□□□□ -0.61
SMC1A-205ENST00000469129 ERFEQ4G0M1 354 aa11.22□□□□□ -0.61
SMC1A-205ENST00000469129 SLC10A5Q5PT55 438 aa11.22□□□□□ -0.61
SMC1A-205ENST00000469129 TBC1D9BQ66K14 1250 aa11.22□□□□□ -0.61
SMC1A-205ENST00000469129 ZSCAN25Q6NSZ9 544 aa11.22□□□□□ -0.61
SMC1A-205ENST00000469129 DDX46Q7L014 1031 aaKnown RBP11.22□□□□□ -0.61
SMC1A-205ENST00000469129 NBPF5PQ86XG9 351 aaPredicted RBP11.22□□□□□ -0.61
SMC1A-205ENST00000469129 FAM227BQ96M60 508 aa11.22□□□□□ -0.61
SMC1A-205ENST00000469129 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.22□□□□□ -0.61
SMC1A-205ENST00000469129 BCL2L12Q9HB09 334 aa11.22□□□□□ -0.61
SMC1A-205ENST00000469129 PALD1Q9ULE6 856 aa11.22□□□□□ -0.61
SMC1A-205ENST00000469129 SNX14Q9Y5W7 946 aa11.22□□□□□ -0.61
SMC1A-205ENST00000469129 PSMA5P28066 241 aa11.21□□□□□ -0.61
SMC1A-205ENST00000469129 ARID4AP29374 1257 aaPredicted RBP11.21□□□□□ -0.61
SMC1A-205ENST00000469129 ADORA1P30542 326 aa11.21□□□□□ -0.61
SMC1A-205ENST00000469129 KCNQ4P56696 695 aa11.21□□□□□ -0.61
SMC1A-205ENST00000469129 KRT32Q14532 448 aa11.21□□□□□ -0.61
SMC1A-205ENST00000469129 NBR1Q14596 966 aa11.21□□□□□ -0.61
SMC1A-205ENST00000469129 MCMDC2Q4G0Z9 681 aa11.21□□□□□ -0.61
SMC1A-205ENST00000469129 TPTE2Q6XPS3 522 aa11.21□□□□□ -0.61
SMC1A-205ENST00000469129 ANKRD18AQ8IVF6 992 aa11.21□□□□□ -0.61
SMC1A-205ENST00000469129 ARHGEF1Q92888 912 aaKnown RBP11.21□□□□□ -0.61
SMC1A-205ENST00000469129 MAP4K1Q92918 833 aa11.21□□□□□ -0.61
SMC1A-205ENST00000469129 KCNB2Q92953 911 aa11.21□□□□□ -0.61
SMC1A-205ENST00000469129 TM6SF1Q9BZW5 370 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms