RNA–Protein interactions for RNA: ENST00000469006.1

SNED1-209, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 963 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-209ENST00000469006 RGMBQ6NW40 437 aa18.9■□□□□ 0.62
SNED1-209ENST00000469006 TBC1D16Q8TBP0 767 aa18.9■□□□□ 0.62
SNED1-209ENST00000469006 RUNDC1Q96C34 613 aa18.9■□□□□ 0.62
SNED1-209ENST00000469006 DCPSQ96C86 337 aaKnown RBP18.9■□□□□ 0.62
SNED1-209ENST00000469006 FAM155AB1AL88 458 aaPredicted RBP18.89■□□□□ 0.61
SNED1-209ENST00000469006 KIF4BQ2VIQ3 1234 aa18.89■□□□□ 0.61
SNED1-209ENST00000469006 C2orf69Q8N8R5 385 aa18.89■□□□□ 0.61
SNED1-209ENST00000469006 HYPKQ9NX55 129 aa18.89■□□□□ 0.61
SNED1-209ENST00000469006 SCN9AQ15858 1988 aa18.89■□□□□ 0.61
SNED1-209ENST00000469006 MYBBP1AQ9BQG0 1328 aaKnown RBP18.89■□□□□ 0.61
SNED1-209ENST00000469006 RPS8P62241 208 aaKnown RBP18.88■□□□□ 0.61
SNED1-209ENST00000469006 DUSP27Q5VZP5 1158 aa18.88■□□□□ 0.61
SNED1-209ENST00000469006 GGA3Q9NZ52 723 aa18.88■□□□□ 0.61
SNED1-209ENST00000469006 POLR2AP24928 1970 aaKnown RBP18.87■□□□□ 0.61
SNED1-209ENST00000469006 TRIM28Q13263 835 aaKnown RBP18.87■□□□□ 0.61
SNED1-209ENST00000469006 WDR43Q15061 677 aaKnown RBP eCLIP18.87■□□□□ 0.61
SNED1-209ENST00000469006 ASTN2O75129 1339 aaPredicted RBP18.86■□□□□ 0.61
SNED1-209ENST00000469006 UFL1O94874 794 aa18.86■□□□□ 0.61
SNED1-209ENST00000469006 ZNF157P51786 506 aaPredicted RBP18.86■□□□□ 0.61
SNED1-209ENST00000469006 KIF23Q02241 960 aaPredicted RBP18.86■□□□□ 0.61
SNED1-209ENST00000469006 SULF1Q8IWU6 871 aa18.86■□□□□ 0.61
SNED1-209ENST00000469006 CCDC102AQ96A19 550 aa18.86■□□□□ 0.61
SNED1-209ENST00000469006 ZC3H12CQ9C0D7 883 aaKnown RBP18.86■□□□□ 0.61
SNED1-209ENST00000469006 SEC31BQ9NQW1 1179 aa18.86■□□□□ 0.61
SNED1-209ENST00000469006 SAGE1Q9NXZ1 904 aa18.86■□□□□ 0.61
SNED1-209ENST00000469006 VIL1P09327 827 aaKnown RBP18.85■□□□□ 0.61
SNED1-209ENST00000469006 GOLGA2Q08379 1002 aa18.85■□□□□ 0.61
SNED1-209ENST00000469006 RIC3Q7Z5B4 369 aa18.85■□□□□ 0.61
SNED1-209ENST00000469006 ZBTB38Q8NAP3 1195 aaPredicted RBP18.85■□□□□ 0.61
SNED1-209ENST00000469006 MBIPQ9NS73 344 aa18.85■□□□□ 0.61
SNED1-209ENST00000469006 PODXL2Q9NZ53 605 aa18.85■□□□□ 0.61
SNED1-209ENST00000469006 G3V3G9 751 aa18.84■□□□□ 0.61
SNED1-209ENST00000469006 DDX10Q13206 875 aaKnown RBP18.84■□□□□ 0.61
SNED1-209ENST00000469006 DCAF8Q5TAQ9 597 aa18.84■□□□□ 0.61
SNED1-209ENST00000469006 CDCA5Q96FF9 252 aa18.84■□□□□ 0.61
SNED1-209ENST00000469006 ANKIB1Q9P2G1 1089 aa18.84■□□□□ 0.61
SNED1-209ENST00000469006 GGA1Q9UJY5 639 aa18.84■□□□□ 0.61
SNED1-209ENST00000469006 ZNF609O15014 1411 aa18.83■□□□□ 0.61
SNED1-209ENST00000469006 SLC10A3P09131 477 aa18.83■□□□□ 0.6
SNED1-209ENST00000469006 RNF186Q9NXI6 227 aa18.83■□□□□ 0.6
SNED1-209ENST00000469006 PSME4Q14997 1843 aa18.82■□□□□ 0.6
SNED1-209ENST00000469006 HSP90B1P14625 803 aaKnown RBP18.82■□□□□ 0.6
SNED1-209ENST00000469006 CCDC152Q4G0S7 254 aa18.82■□□□□ 0.6
SNED1-209ENST00000469006 RSBN1LQ6PCB5 846 aaPredicted RBP18.82■□□□□ 0.6
SNED1-209ENST00000469006 MYD88Q99836 296 aa18.82■□□□□ 0.6
SNED1-209ENST00000469006 PHAXQ9H814 394 aaKnown RBP18.82■□□□□ 0.6
SNED1-209ENST00000469006 ADAMTS8Q9UP79 889 aa18.82■□□□□ 0.6
SNED1-209ENST00000469006 TNRC18O15417 2968 aaPredicted RBP18.81■□□□□ 0.6
SNED1-209ENST00000469006 TRPA1O75762 1119 aa18.81■□□□□ 0.6
SNED1-209ENST00000469006 ZNF280AP59817 542 aaPredicted RBP18.81■□□□□ 0.6
SNED1-209ENST00000469006 ANGEL2Q5VTE6 544 aaKnown RBP18.81■□□□□ 0.6
SNED1-209ENST00000469006 CCDC85AQ96PX6 553 aaPredicted RBP18.81■□□□□ 0.6
SNED1-209ENST00000469006 AKAP11Q9UKA4 1901 aa18.8■□□□□ 0.6
SNED1-209ENST00000469006 PDE8AO60658 829 aa18.8■□□□□ 0.6
SNED1-209ENST00000469006 PCCAP05165 728 aaPredicted RBP18.8■□□□□ 0.6
SNED1-209ENST00000469006 SCARF1Q14162 830 aa18.8■□□□□ 0.6
SNED1-209ENST00000469006 RASAL3Q86YV0 1011 aa18.8■□□□□ 0.6
SNED1-209ENST00000469006 CCDC191Q8NCU4 936 aa18.8■□□□□ 0.6
SNED1-209ENST00000469006 AGBL3Q8NEM8 1001 aa18.8■□□□□ 0.6
SNED1-209ENST00000469006 JARID2Q92833 1246 aaPredicted RBP18.8■□□□□ 0.6
SNED1-209ENST00000469006 PAPPA2Q9BXP8 1791 aa18.8■□□□□ 0.6
SNED1-209ENST00000469006 XDHP47989 1333 aa18.79■□□□□ 0.6
SNED1-209ENST00000469006 ZNF853P0CG23 659 aa18.79■□□□□ 0.6
SNED1-209ENST00000469006 CSRNP1Q96S65 589 aa18.79■□□□□ 0.6
SNED1-209ENST00000469006 CWC25Q9NXE8 425 aaPredicted RBP18.79■□□□□ 0.6
SNED1-209ENST00000469006 PDE4DIPQ5VU43 2346 aa18.79■□□□□ 0.6
SNED1-209ENST00000469006 ELL2O00472 640 aaPredicted RBP18.78■□□□□ 0.6
SNED1-209ENST00000469006 MYOZ2Q9NPC6 264 aa18.78■□□□□ 0.6
SNED1-209ENST00000469006 IFT57Q9NWB7 429 aa18.78■□□□□ 0.6
SNED1-209ENST00000469006 USP17L8P0C7I0 530 aa18.77■□□□□ 0.6
SNED1-209ENST00000469006 SOX10P56693 466 aa18.77■□□□□ 0.6
SNED1-209ENST00000469006 ANKRD18AQ8IVF6 992 aa18.77■□□□□ 0.6
SNED1-209ENST00000469006 GMLQ99445 158 aa18.77■□□□□ 0.6
SNED1-209ENST00000469006 PITPNM2Q9BZ72 1349 aa18.76■□□□□ 0.59
SNED1-209ENST00000469006 USP17L3A6NCW0 530 aa18.76■□□□□ 0.59
SNED1-209ENST00000469006 USP17L4A6NCW7 530 aa18.76■□□□□ 0.59
SNED1-209ENST00000469006 GNAI1P63096 354 aa18.76■□□□□ 0.59
SNED1-209ENST00000469006 FKBP1BP68106 108 aa18.76■□□□□ 0.59
SNED1-209ENST00000469006 USP17L1Q7RTZ2 530 aa18.76■□□□□ 0.59
SNED1-209ENST00000469006 ZNF316A6NFI3 1004 aaPredicted RBP18.75■□□□□ 0.59
SNED1-209ENST00000469006 ATP2B4P23634 1241 aa18.75■□□□□ 0.59
SNED1-209ENST00000469006 CTU1Q7Z7A3 348 aaKnown RBP18.75■□□□□ 0.59
SNED1-209ENST00000469006 REM2Q8IYK8 340 aaPredicted RBP18.75■□□□□ 0.59
SNED1-209ENST00000469006 METTL22Q9BUU2 404 aaPredicted RBP18.75■□□□□ 0.59
SNED1-209ENST00000469006 SCAF8Q9UPN6 1271 aaKnown RBP18.75■□□□□ 0.59
SNED1-209ENST00000469006 SPEF2Q9C093 1822 aa18.74■□□□□ 0.59
SNED1-209ENST00000469006 MED23Q9ULK4 1368 aa18.74■□□□□ 0.59
SNED1-209ENST00000469006 DDX58O95786 925 aaKnown RBP18.74■□□□□ 0.59
SNED1-209ENST00000469006 CTSWP56202 376 aa18.74■□□□□ 0.59
SNED1-209ENST00000469006 CALD1Q05682 793 aaKnown RBP18.74■□□□□ 0.59
SNED1-209ENST00000469006 MOB2Q70IA6 237 aa18.74■□□□□ 0.59
SNED1-209ENST00000469006 PODNQ7Z5L7 613 aa18.74■□□□□ 0.59
SNED1-209ENST00000469006 C8orf58Q8NAV2 365 aa18.74■□□□□ 0.59
SNED1-209ENST00000469006 CDC5LQ99459 802 aaKnown RBP18.74■□□□□ 0.59
SNED1-209ENST00000469006 WTIPA6NIX2 430 aaPredicted RBP18.73■□□□□ 0.59
SNED1-209ENST00000469006 APAF1O14727 1248 aa18.73■□□□□ 0.59
SNED1-209ENST00000469006 MAP3K2Q9Y2U5 619 aa18.73■□□□□ 0.59
SNED1-209ENST00000469006 ZNF646O15015 1829 aaPredicted RBP18.72■□□□□ 0.59
SNED1-209ENST00000469006 UBE2Q2LH0YL09 131 aa18.71■□□□□ 0.59
SNED1-209ENST00000469006 NBPF9Q3BBW0 867 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms