RNA–Protein interactions for RNA: ENST00000468836.1

CLRN1-204, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-204ENST00000468836 TBC1D16Q8TBP0 767 aa16.43■□□□□ 0.22
CLRN1-204ENST00000468836 ANKRD18BA2A2Z9 1011 aa16.42■□□□□ 0.22
CLRN1-204ENST00000468836 RAD17O75943 681 aa16.42■□□□□ 0.22
CLRN1-204ENST00000468836 LDHDQ86WU2 507 aa16.42■□□□□ 0.22
CLRN1-204ENST00000468836 DBNDD1Q9H9R9 158 aa16.42■□□□□ 0.22
CLRN1-204ENST00000468836 BSDC1Q9NW68 430 aaPredicted RBP16.42■□□□□ 0.22
CLRN1-204ENST00000468836 PODXL2Q9NZ53 605 aa16.42■□□□□ 0.22
CLRN1-204ENST00000468836 POLLQ9UGP5 575 aa16.42■□□□□ 0.22
CLRN1-204ENST00000468836 COL4A5P29400 1685 aa16.42■□□□□ 0.22
CLRN1-204ENST00000468836 LRRC37AA6NMS7 1700 aa16.42■□□□□ 0.22
CLRN1-204ENST00000468836 ATP2B4P23634 1241 aa16.41■□□□□ 0.22
CLRN1-204ENST00000468836 CASP7P55210 303 aa16.41■□□□□ 0.22
CLRN1-204ENST00000468836 CXCL9Q07325 125 aa16.41■□□□□ 0.22
CLRN1-204ENST00000468836 IFIT5Q13325 482 aaKnown RBP16.41■□□□□ 0.22
CLRN1-204ENST00000468836 ECE2O60344 883 aa16.4■□□□□ 0.22
CLRN1-204ENST00000468836 KCNJ4P48050 445 aa16.4■□□□□ 0.22
CLRN1-204ENST00000468836 DOK7Q18PE1 504 aa16.4■□□□□ 0.22
CLRN1-204ENST00000468836 CCDC57Q2TAC2 916 aa16.4■□□□□ 0.22
CLRN1-204ENST00000468836 TRMT2AQ8IZ69 625 aaKnown RBP16.4■□□□□ 0.22
CLRN1-204ENST00000468836 GPR101Q96P66 508 aaPredicted RBP16.4■□□□□ 0.22
CLRN1-204ENST00000468836 DUOX1Q9NRD9 1551 aa16.39■□□□□ 0.21
CLRN1-204ENST00000468836 CACNA1FO60840 1977 aa16.39■□□□□ 0.21
CLRN1-204ENST00000468836 CSF1RP07333 972 aa16.39■□□□□ 0.21
CLRN1-204ENST00000468836 POTEIP0CG38 1075 aa16.39■□□□□ 0.21
CLRN1-204ENST00000468836 POTEJP0CG39 1038 aa16.39■□□□□ 0.21
CLRN1-204ENST00000468836 LMBR1LQ6UX01 489 aa16.39■□□□□ 0.21
CLRN1-204ENST00000468836 ANKRD2Q9GZV1 360 aa16.39■□□□□ 0.21
CLRN1-204ENST00000468836 COL4A1P02462 1669 aa16.38■□□□□ 0.21
CLRN1-204ENST00000468836 GMPSP49915 693 aaPredicted RBP16.38■□□□□ 0.21
CLRN1-204ENST00000468836 SCNN1DP51172 638 aa16.38■□□□□ 0.21
CLRN1-204ENST00000468836 MINPP1Q9UNW1 487 aa16.38■□□□□ 0.21
CLRN1-204ENST00000468836 KIF16BQ96L93 1317 aa16.38■□□□□ 0.21
CLRN1-204ENST00000468836 TAF1P21675 1872 aa16.37■□□□□ 0.21
CLRN1-204ENST00000468836 EPS15P42566 896 aa16.37■□□□□ 0.21
CLRN1-204ENST00000468836 FOXO4P98177 505 aa16.37■□□□□ 0.21
CLRN1-204ENST00000468836 USP50Q70EL3 339 aaPredicted RBP16.37■□□□□ 0.21
CLRN1-204ENST00000468836 POTEDQ86YR6 584 aa16.37■□□□□ 0.21
CLRN1-204ENST00000468836 API5Q9BZZ5 524 aaKnown RBP16.37■□□□□ 0.21
CLRN1-204ENST00000468836 ADARB2Q9NS39 739 aaKnown RBP16.37■□□□□ 0.21
CLRN1-204ENST00000468836 GPRC5DQ9NZD1 345 aa16.37■□□□□ 0.21
CLRN1-204ENST00000468836 SCN4AP35499 1836 aa16.36■□□□□ 0.21
CLRN1-204ENST00000468836 YDJCA8MPS7 323 aa16.36■□□□□ 0.21
CLRN1-204ENST00000468836 CCT4P50991 539 aaKnown RBP16.36■□□□□ 0.21
CLRN1-204ENST00000468836 CNNM1Q9NRU3 951 aa16.36■□□□□ 0.21
CLRN1-204ENST00000468836 NOB1Q9ULX3 412 aaKnown RBP16.36■□□□□ 0.21
CLRN1-204ENST00000468836 LEMD3Q9Y2U8 911 aa16.36■□□□□ 0.21
CLRN1-204ENST00000468836 H7C1D1 291 aa16.35■□□□□ 0.21
CLRN1-204ENST00000468836 PSMD14O00487 310 aa16.35■□□□□ 0.21
CLRN1-204ENST00000468836 SUCLG2Q96I99 432 aa16.35■□□□□ 0.21
CLRN1-204ENST00000468836 MED23Q9ULK4 1368 aa16.35■□□□□ 0.21
CLRN1-204ENST00000468836 NBPF7P0C2Y1 421 aaPredicted RBP16.34■□□□□ 0.21
CLRN1-204ENST00000468836 RPS12P25398 132 aaKnown RBP16.34■□□□□ 0.21
CLRN1-204ENST00000468836 RARSP54136 660 aaKnown RBP16.34■□□□□ 0.21
CLRN1-204ENST00000468836 CHRNDQ07001 517 aa16.34■□□□□ 0.21
CLRN1-204ENST00000468836 MAP1SQ66K74 1059 aaPredicted RBP16.34■□□□□ 0.21
CLRN1-204ENST00000468836 LDHAL6AQ6ZMR3 332 aa16.34■□□□□ 0.21
CLRN1-204ENST00000468836 FBXW7Q969H0 707 aa16.34■□□□□ 0.21
CLRN1-204ENST00000468836 ZNF804BA4D1E1 1349 aa16.34■□□□□ 0.21
CLRN1-204ENST00000468836 MYH3P11055 1940 aa16.33■□□□□ 0.21
CLRN1-204ENST00000468836 IPO8O15397 1037 aaKnown RBP16.33■□□□□ 0.2
CLRN1-204ENST00000468836 HTRA3P83110 453 aa16.33■□□□□ 0.2
CLRN1-204ENST00000468836 EPHA10Q5JZY3 1008 aa16.33■□□□□ 0.2
CLRN1-204ENST00000468836 PODNQ7Z5L7 613 aa16.33■□□□□ 0.2
CLRN1-204ENST00000468836 MICALL2Q8IY33 904 aa16.33■□□□□ 0.2
CLRN1-204ENST00000468836 CNTROBQ8N137 903 aa16.33■□□□□ 0.2
CLRN1-204ENST00000468836 BICC1Q9H694 974 aaKnown RBP16.33■□□□□ 0.2
CLRN1-204ENST00000468836 CNOT7Q9UIV1 285 aaKnown RBP16.33■□□□□ 0.2
CLRN1-204ENST00000468836 ZBTB12Q9Y330 459 aaPredicted RBP16.33■□□□□ 0.2
CLRN1-204ENST00000468836 UTYO14607 1347 aa16.32■□□□□ 0.2
CLRN1-204ENST00000468836 PLIN1O60240 522 aa16.32■□□□□ 0.2
CLRN1-204ENST00000468836 LTBP1Q14766 1721 aa16.32■□□□□ 0.2
CLRN1-204ENST00000468836 DPF2Q92785 391 aa16.32■□□□□ 0.2
CLRN1-204ENST00000468836 FRAT1Q92837 279 aaPredicted RBP16.32■□□□□ 0.2
CLRN1-204ENST00000468836 COA1Q9GZY4 146 aa16.32■□□□□ 0.2
CLRN1-204ENST00000468836 HDAC5Q9UQL6 1122 aa16.32■□□□□ 0.2
CLRN1-204ENST00000468836 UBTFL1P0CB47 393 aaPredicted RBP16.31■□□□□ 0.2
CLRN1-204ENST00000468836 BRPF1P55201 1214 aaPredicted RBP16.31■□□□□ 0.2
CLRN1-204ENST00000468836 ZNF594Q96JF6 807 aaPredicted RBP16.31■□□□□ 0.2
CLRN1-204ENST00000468836 ZBED9Q6R2W3 1325 aa16.3■□□□□ 0.2
CLRN1-204ENST00000468836 USP17L3A6NCW0 530 aa16.3■□□□□ 0.2
CLRN1-204ENST00000468836 USP17L4A6NCW7 530 aa16.3■□□□□ 0.2
CLRN1-204ENST00000468836 TAF5LO75529 589 aa16.3■□□□□ 0.2
CLRN1-204ENST00000468836 USP17L1Q7RTZ2 530 aa16.3■□□□□ 0.2
CLRN1-204ENST00000468836 HELBQ8NG08 1087 aaPredicted RBP16.3■□□□□ 0.2
CLRN1-204ENST00000468836 KCNQ5Q9NR82 932 aa16.3■□□□□ 0.2
CLRN1-204ENST00000468836 CREBZFQ9NS37 354 aa16.3■□□□□ 0.2
CLRN1-204ENST00000468836 SPEF2Q9C093 1822 aa16.29■□□□□ 0.2
CLRN1-204ENST00000468836 VIL1P09327 827 aaKnown RBP16.29■□□□□ 0.2
CLRN1-204ENST00000468836 RBM26Q5T8P6 1007 aaKnown RBP16.29■□□□□ 0.2
CLRN1-204ENST00000468836 RSBN1LQ6PCB5 846 aaPredicted RBP16.29■□□□□ 0.2
CLRN1-204ENST00000468836 ARHGAP45Q92619 1136 aa16.29■□□□□ 0.2
CLRN1-204ENST00000468836 USP44Q9H0E7 712 aa16.29■□□□□ 0.2
CLRN1-204ENST00000468836 TMEM88BA6NKF7 163 aa16.28■□□□□ 0.2
CLRN1-204ENST00000468836 RABL6Q3YEC7 729 aaPredicted RBP16.28■□□□□ 0.2
CLRN1-204ENST00000468836 TBC1D10BQ4KMP7 808 aaPredicted RBP16.28■□□□□ 0.2
CLRN1-204ENST00000468836 ZNF804AQ7Z570 1209 aa16.28■□□□□ 0.2
CLRN1-204ENST00000468836 AGBL3Q8NEM8 1001 aa16.28■□□□□ 0.2
CLRN1-204ENST00000468836 TRPM4Q8TD43 1214 aa16.28■□□□□ 0.2
CLRN1-204ENST00000468836 KLRG1Q96E93 195 aa16.28■□□□□ 0.2
CLRN1-204ENST00000468836 MYO3BQ8WXR4 1341 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms