RNA–Protein interactions for RNA: ENST00000468822.5

SRRM1-207, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 768 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-207ENST00000468822 TRIM35Q9UPQ4 493 aa20.21■□□□□ 0.83
SRRM1-207ENST00000468822 ANKRD13DQ6ZTN6 518 aa20.2■□□□□ 0.82
SRRM1-207ENST00000468822 TBC1D16Q8TBP0 767 aa20.2■□□□□ 0.82
SRRM1-207ENST00000468822 RPS12P25398 132 aaKnown RBP20.19■□□□□ 0.82
SRRM1-207ENST00000468822 LMOD3Q0VAK6 560 aa20.19■□□□□ 0.82
SRRM1-207ENST00000468822 HDGFL1Q5TGJ6 251 aa20.19■□□□□ 0.82
SRRM1-207ENST00000468822 LAS1LQ9Y4W2 734 aaKnown RBP20.19■□□□□ 0.82
SRRM1-207ENST00000468822 ZNF157P51786 506 aaPredicted RBP20.18■□□□□ 0.82
SRRM1-207ENST00000468822 C2orf69Q8N8R5 385 aa20.18■□□□□ 0.82
SRRM1-207ENST00000468822 DCPSQ96C86 337 aaKnown RBP20.18■□□□□ 0.82
SRRM1-207ENST00000468822 RNF186Q9NXI6 227 aa20.18■□□□□ 0.82
SRRM1-207ENST00000468822 IRS4O14654 1257 aaPredicted RBP20.17■□□□□ 0.82
SRRM1-207ENST00000468822 TRPA1O75762 1119 aa20.17■□□□□ 0.82
SRRM1-207ENST00000468822 VIL1P09327 827 aaKnown RBP20.17■□□□□ 0.82
SRRM1-207ENST00000468822 RPS8P62241 208 aaKnown RBP20.17■□□□□ 0.82
SRRM1-207ENST00000468822 KIF4BQ2VIQ3 1234 aa20.17■□□□□ 0.82
SRRM1-207ENST00000468822 SEC31BQ9NQW1 1179 aa20.17■□□□□ 0.82
SRRM1-207ENST00000468822 SAGE1Q9NXZ1 904 aa20.17■□□□□ 0.82
SRRM1-207ENST00000468822 GGA3Q9NZ52 723 aa20.17■□□□□ 0.82
SRRM1-207ENST00000468822 CCDC102AQ96A19 550 aa20.16■□□□□ 0.82
SRRM1-207ENST00000468822 CSRNP1Q96S65 589 aa20.16■□□□□ 0.82
SRRM1-207ENST00000468822 SLC10A3P09131 477 aa20.15■□□□□ 0.82
SRRM1-207ENST00000468822 SOX10P56693 466 aa20.15■□□□□ 0.82
SRRM1-207ENST00000468822 TRIM28Q13263 835 aaKnown RBP20.15■□□□□ 0.82
SRRM1-207ENST00000468822 CDCA5Q96FF9 252 aa20.15■□□□□ 0.82
SRRM1-207ENST00000468822 EYA3Q99504 573 aa20.15■□□□□ 0.82
SRRM1-207ENST00000468822 DBF4Q9UBU7 674 aaPredicted RBP20.15■□□□□ 0.82
SRRM1-207ENST00000468822 PODXL2Q9NZ53 605 aa20.14■□□□□ 0.81
SRRM1-207ENST00000468822 HOXB7P09629 217 aa20.13■□□□□ 0.81
SRRM1-207ENST00000468822 ZNF280AP59817 542 aaPredicted RBP20.13■□□□□ 0.81
SRRM1-207ENST00000468822 SULF1Q8IWU6 871 aa20.13■□□□□ 0.81
SRRM1-207ENST00000468822 ZC3H12CQ9C0D7 883 aaKnown RBP20.13■□□□□ 0.81
SRRM1-207ENST00000468822 UFL1O94874 794 aa20.12■□□□□ 0.81
SRRM1-207ENST00000468822 SCARF1Q14162 830 aa20.12■□□□□ 0.81
SRRM1-207ENST00000468822 ANGEL2Q5VTE6 544 aaKnown RBP20.12■□□□□ 0.81
SRRM1-207ENST00000468822 DUSP27Q5VZP5 1158 aa20.12■□□□□ 0.81
SRRM1-207ENST00000468822 JARID2Q92833 1246 aaPredicted RBP20.12■□□□□ 0.81
SRRM1-207ENST00000468822 HYPKQ9NX55 129 aa20.12■□□□□ 0.81
SRRM1-207ENST00000468822 SCAF8Q9UPN6 1271 aaKnown RBP20.12■□□□□ 0.81
SRRM1-207ENST00000468822 WTIPA6NIX2 430 aaPredicted RBP20.11■□□□□ 0.81
SRRM1-207ENST00000468822 RALBP1Q15311 655 aa20.11■□□□□ 0.81
SRRM1-207ENST00000468822 MOB2Q70IA6 237 aa20.11■□□□□ 0.81
SRRM1-207ENST00000468822 RASAL3Q86YV0 1011 aa20.11■□□□□ 0.81
SRRM1-207ENST00000468822 GMLQ99445 158 aa20.11■□□□□ 0.81
SRRM1-207ENST00000468822 ZNF609O15014 1411 aa20.1■□□□□ 0.81
SRRM1-207ENST00000468822 RSBN1LQ6PCB5 846 aaPredicted RBP20.1■□□□□ 0.81
SRRM1-207ENST00000468822 ZBTB38Q8NAP3 1195 aaPredicted RBP20.1■□□□□ 0.81
SRRM1-207ENST00000468822 RUNDC1Q96C34 613 aa20.1■□□□□ 0.81
SRRM1-207ENST00000468822 CCDC85AQ96PX6 553 aaPredicted RBP20.1■□□□□ 0.81
SRRM1-207ENST00000468822 PHAXQ9H814 394 aaKnown RBP20.1■□□□□ 0.81
SRRM1-207ENST00000468822 MBIPQ9NS73 344 aa20.1■□□□□ 0.81
SRRM1-207ENST00000468822 ANKIB1Q9P2G1 1089 aa20.1■□□□□ 0.81
SRRM1-207ENST00000468822 GGA1Q9UJY5 639 aa20.09■□□□□ 0.81
SRRM1-207ENST00000468822 AKAP11Q9UKA4 1901 aa20.09■□□□□ 0.81
SRRM1-207ENST00000468822 AGBL3Q8NEM8 1001 aa20.08■□□□□ 0.81
SRRM1-207ENST00000468822 MYD88Q99836 296 aa20.08■□□□□ 0.81
SRRM1-207ENST00000468822 HTTP42858 3142 aa20.07■□□□□ 0.8
SRRM1-207ENST00000468822 RIC3Q7Z5B4 369 aa20.07■□□□□ 0.8
SRRM1-207ENST00000468822 CTU1Q7Z7A3 348 aaKnown RBP20.07■□□□□ 0.8
SRRM1-207ENST00000468822 ADAMTS8Q9UP79 889 aa20.07■□□□□ 0.8
SRRM1-207ENST00000468822 PSME4Q14997 1843 aa20.06■□□□□ 0.8
SRRM1-207ENST00000468822 ZNF853P0CG23 659 aa20.06■□□□□ 0.8
SRRM1-207ENST00000468822 PRAMEF18Q5VWM3 479 aa20.06■□□□□ 0.8
SRRM1-207ENST00000468822 MYOZ2Q9NPC6 264 aa20.06■□□□□ 0.8
SRRM1-207ENST00000468822 PAPPA2Q9BXP8 1791 aa20.06■□□□□ 0.8
SRRM1-207ENST00000468822 G3V3G9 751 aa20.05■□□□□ 0.8
SRRM1-207ENST00000468822 PCCAP05165 728 aaPredicted RBP20.05■□□□□ 0.8
SRRM1-207ENST00000468822 USP17L8P0C7I0 530 aa20.05■□□□□ 0.8
SRRM1-207ENST00000468822 DCAF8Q5TAQ9 597 aa20.05■□□□□ 0.8
SRRM1-207ENST00000468822 MXD3Q9BW11 206 aa20.05■□□□□ 0.8
SRRM1-207ENST00000468822 MKI67P46013 3256 aaKnown RBP20.05■□□□□ 0.8
SRRM1-207ENST00000468822 MYBBP1AQ9BQG0 1328 aaKnown RBP20.04■□□□□ 0.8
SRRM1-207ENST00000468822 UBE2Q2LH0YL09 131 aa20.04■□□□□ 0.8
SRRM1-207ENST00000468822 ELL2O00472 640 aaPredicted RBP20.04■□□□□ 0.8
SRRM1-207ENST00000468822 GOLGA2Q08379 1002 aa20.04■□□□□ 0.8
SRRM1-207ENST00000468822 NBPF9Q3BBW0 867 aa20.04■□□□□ 0.8
SRRM1-207ENST00000468822 CCDC152Q4G0S7 254 aa20.04■□□□□ 0.8
SRRM1-207ENST00000468822 HPS5Q9UPZ3 1129 aa20.04■□□□□ 0.8
SRRM1-207ENST00000468822 XDHP47989 1333 aa20.03■□□□□ 0.8
SRRM1-207ENST00000468822 PDE8AO60658 829 aa20.03■□□□□ 0.8
SRRM1-207ENST00000468822 FKBP1BP68106 108 aa20.03■□□□□ 0.8
SRRM1-207ENST00000468822 CCDC191Q8NCU4 936 aa20.03■□□□□ 0.8
SRRM1-207ENST00000468822 PITPNM2Q9BZ72 1349 aa20.02■□□□□ 0.8
SRRM1-207ENST00000468822 ZNF646O15015 1829 aaPredicted RBP20.02■□□□□ 0.8
SRRM1-207ENST00000468822 CENPFP49454 3210 aa20.02■□□□□ 0.8
SRRM1-207ENST00000468822 USP17L3A6NCW0 530 aa20.02■□□□□ 0.8
SRRM1-207ENST00000468822 USP17L4A6NCW7 530 aa20.02■□□□□ 0.8
SRRM1-207ENST00000468822 TBC1D8O95759 1140 aa20.02■□□□□ 0.8
SRRM1-207ENST00000468822 USP17L1Q7RTZ2 530 aa20.02■□□□□ 0.8
SRRM1-207ENST00000468822 CWC25Q9NXE8 425 aaPredicted RBP20.02■□□□□ 0.8
SRRM1-207ENST00000468822 WDR43Q15061 677 aaKnown RBP eCLIP20.01■□□□□ 0.79
SRRM1-207ENST00000468822 ANKRD18AQ8IVF6 992 aa20.01■□□□□ 0.79
SRRM1-207ENST00000468822 C8orf58Q8NAV2 365 aa20.01■□□□□ 0.79
SRRM1-207ENST00000468822 ZNF296Q8WUU4 475 aaPredicted RBP20.01■□□□□ 0.79
SRRM1-207ENST00000468822 PCDH10Q9P2E7 1040 aa20.01■□□□□ 0.79
SRRM1-207ENST00000468822 ATP2B4P23634 1241 aa20■□□□□ 0.79
SRRM1-207ENST00000468822 DACT2Q5SW24 774 aa20■□□□□ 0.79
SRRM1-207ENST00000468822 PODNQ7Z5L7 613 aa20■□□□□ 0.79
SRRM1-207ENST00000468822 REM2Q8IYK8 340 aaPredicted RBP20■□□□□ 0.79
SRRM1-207ENST00000468822 METTL22Q9BUU2 404 aaPredicted RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms