RNA–Protein interactions for RNA: ENST00000468499.5

COPS6-206, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 3

Gene COPS6, Length 745 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-206ENST00000468499 KIF4BQ2VIQ3 1234 aa23.23■■□□□ 1.31
COPS6-206ENST00000468499 GGA3Q9NZ52 723 aa23.23■■□□□ 1.31
COPS6-206ENST00000468499 PCDH10Q9P2E7 1040 aa23.23■■□□□ 1.31
COPS6-206ENST00000468499 ATP5J2-PTCD1G3V325 749 aa23.22■■□□□ 1.31
COPS6-206ENST00000468499 C2orf69Q8N8R5 385 aa23.22■■□□□ 1.31
COPS6-206ENST00000468499 ZNF609O15014 1411 aa23.22■■□□□ 1.31
COPS6-206ENST00000468499 CHL1O00533 1208 aa23.21■■□□□ 1.31
COPS6-206ENST00000468499 VIL1P09327 827 aaKnown RBP23.21■■□□□ 1.31
COPS6-206ENST00000468499 RASAL3Q86YV0 1011 aa23.21■■□□□ 1.31
COPS6-206ENST00000468499 PLBD2Q8NHP8 589 aa23.21■■□□□ 1.31
COPS6-206ENST00000468499 CCDC102AQ96A19 550 aa23.21■■□□□ 1.31
COPS6-206ENST00000468499 DCPSQ96C86 337 aaKnown RBP23.21■■□□□ 1.31
COPS6-206ENST00000468499 CDCA5Q96FF9 252 aa23.21■■□□□ 1.31
COPS6-206ENST00000468499 PAPPA2Q9BXP8 1791 aa23.21■■□□□ 1.31
COPS6-206ENST00000468499 C6orf229H3BNL8 230 aa23.2■■□□□ 1.3
COPS6-206ENST00000468499 RTL5Q5HYW3 569 aaPredicted RBP23.2■■□□□ 1.3
COPS6-206ENST00000468499 SEC31BQ9NQW1 1179 aa23.19■■□□□ 1.3
COPS6-206ENST00000468499 TRIM35Q9UPQ4 493 aa23.18■■□□□ 1.3
COPS6-206ENST00000468499 ZNF280AP59817 542 aaPredicted RBP23.17■■□□□ 1.3
COPS6-206ENST00000468499 ANKRD13DQ6ZTN6 518 aa23.17■■□□□ 1.3
COPS6-206ENST00000468499 PNNQ9H307 717 aaKnown RBP23.17■■□□□ 1.3
COPS6-206ENST00000468499 PODXL2Q9NZ53 605 aa23.17■■□□□ 1.3
COPS6-206ENST00000468499 SCAF8Q9UPN6 1271 aaKnown RBP23.17■■□□□ 1.3
COPS6-206ENST00000468499 ANGEL2Q5VTE6 544 aaKnown RBP23.16■■□□□ 1.3
COPS6-206ENST00000468499 MOB2Q70IA6 237 aa23.16■■□□□ 1.3
COPS6-206ENST00000468499 HTTP42858 3142 aa23.16■■□□□ 1.3
COPS6-206ENST00000468499 IRS4O14654 1257 aaPredicted RBP23.15■■□□□ 1.3
COPS6-206ENST00000468499 RPS8P62241 208 aaKnown RBP23.15■■□□□ 1.3
COPS6-206ENST00000468499 HDGFL1Q5TGJ6 251 aa23.15■■□□□ 1.3
COPS6-206ENST00000468499 CTU1Q7Z7A3 348 aaKnown RBP23.15■■□□□ 1.3
COPS6-206ENST00000468499 SULF1Q8IWU6 871 aa23.15■■□□□ 1.3
COPS6-206ENST00000468499 GMLQ99445 158 aa23.15■■□□□ 1.3
COPS6-206ENST00000468499 EYA3Q99504 573 aa23.15■■□□□ 1.3
COPS6-206ENST00000468499 TRIM28Q13263 835 aaKnown RBP23.14■■□□□ 1.29
COPS6-206ENST00000468499 CCDC146Q8IYE0 955 aa23.14■■□□□ 1.29
COPS6-206ENST00000468499 MKI67P46013 3256 aaKnown RBP23.14■■□□□ 1.29
COPS6-206ENST00000468499 SPEF2Q9C093 1822 aa23.13■■□□□ 1.29
COPS6-206ENST00000468499 WTIPA6NIX2 430 aaPredicted RBP23.13■■□□□ 1.29
COPS6-206ENST00000468499 SCARF1Q14162 830 aa23.13■■□□□ 1.29
COPS6-206ENST00000468499 HPS5Q9UPZ3 1129 aa23.13■■□□□ 1.29
COPS6-206ENST00000468499 UFL1O94874 794 aa23.12■■□□□ 1.29
COPS6-206ENST00000468499 LMOD3Q0VAK6 560 aa23.12■■□□□ 1.29
COPS6-206ENST00000468499 NEUROD2Q15784 382 aa23.12■■□□□ 1.29
COPS6-206ENST00000468499 RSBN1LQ6PCB5 846 aaPredicted RBP23.12■■□□□ 1.29
COPS6-206ENST00000468499 ZC3H12CQ9C0D7 883 aaKnown RBP23.11■■□□□ 1.29
COPS6-206ENST00000468499 HOXB7P09629 217 aa23.1■■□□□ 1.29
COPS6-206ENST00000468499 DBF4Q9UBU7 674 aaPredicted RBP23.1■■□□□ 1.29
COPS6-206ENST00000468499 LAS1LQ9Y4W2 734 aaKnown RBP23.1■■□□□ 1.29
COPS6-206ENST00000468499 BRCA2P51587 3418 aa23.1■■□□□ 1.29
COPS6-206ENST00000468499 PRPF38BQ5VTL8 546 aaKnown RBP23.09■■□□□ 1.29
COPS6-206ENST00000468499 PRAMEF18Q5VWM3 479 aa23.09■■□□□ 1.29
COPS6-206ENST00000468499 AGBL3Q8NEM8 1001 aa23.09■■□□□ 1.29
COPS6-206ENST00000468499 JARID2Q92833 1246 aaPredicted RBP23.09■■□□□ 1.29
COPS6-206ENST00000468499 MYOZ2Q9NPC6 264 aa23.09■■□□□ 1.29
COPS6-206ENST00000468499 ZBTB38Q8NAP3 1195 aaPredicted RBP23.08■■□□□ 1.29
COPS6-206ENST00000468499 ZNF296Q8WUU4 475 aaPredicted RBP23.08■■□□□ 1.29
COPS6-206ENST00000468499 PHAXQ9H814 394 aaKnown RBP23.08■■□□□ 1.29
COPS6-206ENST00000468499 GGA1Q9UJY5 639 aa23.08■■□□□ 1.29
COPS6-206ENST00000468499 CENPFP49454 3210 aa23.08■■□□□ 1.28
COPS6-206ENST00000468499 PITPNM2Q9BZ72 1349 aa23.08■■□□□ 1.28
COPS6-206ENST00000468499 TBC1D8O95759 1140 aa23.07■■□□□ 1.28
COPS6-206ENST00000468499 FKBP1BP68106 108 aa23.07■■□□□ 1.28
COPS6-206ENST00000468499 DUSP27Q5VZP5 1158 aa23.07■■□□□ 1.28
COPS6-206ENST00000468499 CCDC85AQ96PX6 553 aaPredicted RBP23.07■■□□□ 1.28
COPS6-206ENST00000468499 MXD3Q9BW11 206 aa23.07■■□□□ 1.28
COPS6-206ENST00000468499 UBE2Q2LH0YL09 131 aa23.06■■□□□ 1.28
COPS6-206ENST00000468499 HYPKQ9NX55 129 aa23.06■■□□□ 1.28
COPS6-206ENST00000468499 ANKIB1Q9P2G1 1089 aa23.06■■□□□ 1.28
COPS6-206ENST00000468499 USP17L8P0C7I0 530 aa23.05■■□□□ 1.28
COPS6-206ENST00000468499 NBPF9Q3BBW0 867 aa23.05■■□□□ 1.28
COPS6-206ENST00000468499 R3HDMLQ9H3Y0 253 aa23.05■■□□□ 1.28
COPS6-206ENST00000468499 MBIPQ9NS73 344 aa23.05■■□□□ 1.28
COPS6-206ENST00000468499 REM2Q8IYK8 340 aaPredicted RBP23.04■■□□□ 1.28
COPS6-206ENST00000468499 LAMB1P07942 1786 aa23.04■■□□□ 1.28
COPS6-206ENST00000468499 MYH3P11055 1940 aa23.04■■□□□ 1.28
COPS6-206ENST00000468499 MYD88Q99836 296 aa23.03■■□□□ 1.28
COPS6-206ENST00000468499 XDHP47989 1333 aa23.03■■□□□ 1.28
COPS6-206ENST00000468499 PCCAP05165 728 aaPredicted RBP23.02■■□□□ 1.28
COPS6-206ENST00000468499 ZNF853P0CG23 659 aa23.02■■□□□ 1.28
COPS6-206ENST00000468499 USP17L3A6NCW0 530 aa23.01■■□□□ 1.27
COPS6-206ENST00000468499 USP17L4A6NCW7 530 aa23.01■■□□□ 1.27
COPS6-206ENST00000468499 TM4SF4P48230 202 aa23.01■■□□□ 1.27
COPS6-206ENST00000468499 DACT2Q5SW24 774 aa23.01■■□□□ 1.27
COPS6-206ENST00000468499 USP17L1Q7RTZ2 530 aa23.01■■□□□ 1.27
COPS6-206ENST00000468499 RIC3Q7Z5B4 369 aa23.01■■□□□ 1.27
COPS6-206ENST00000468499 RUNDC1Q96C34 613 aa23.01■■□□□ 1.27
COPS6-206ENST00000468499 GPR25O00155 361 aa23■■□□□ 1.27
COPS6-206ENST00000468499 PDE8AO60658 829 aa23■■□□□ 1.27
COPS6-206ENST00000468499 MKRN3Q13064 507 aaKnown RBP23■■□□□ 1.27
COPS6-206ENST00000468499 RALBP1Q15311 655 aa23■■□□□ 1.27
COPS6-206ENST00000468499 CCDC152Q4G0S7 254 aa23■■□□□ 1.27
COPS6-206ENST00000468499 MED23Q9ULK4 1368 aa23■■□□□ 1.27
COPS6-206ENST00000468499 G3V3G9 751 aa22.99■■□□□ 1.27
COPS6-206ENST00000468499 WNT10BO00744 389 aa22.99■■□□□ 1.27
COPS6-206ENST00000468499 DCAF8Q5TAQ9 597 aa22.99■■□□□ 1.27
COPS6-206ENST00000468499 PODNQ7Z5L7 613 aa22.99■■□□□ 1.27
COPS6-206ENST00000468499 TXNRD3Q86VQ6 643 aa22.99■■□□□ 1.27
COPS6-206ENST00000468499 PKN2Q16513 984 aaKnown RBP22.98■■□□□ 1.27
COPS6-206ENST00000468499 NOM1Q5C9Z4 860 aaKnown RBP22.98■■□□□ 1.27
COPS6-206ENST00000468499 CCDC191Q8NCU4 936 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms