RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 PTPRCP08575 1304 aa18.51■□□□□ 0.55
COMMD3-206ENST00000468179 G3V3G9 751 aa18.5■□□□□ 0.55
COMMD3-206ENST00000468179 EAPPQ56P03 285 aaPredicted RBP18.5■□□□□ 0.55
COMMD3-206ENST00000468179 DCAF8Q5TAQ9 597 aa18.5■□□□□ 0.55
COMMD3-206ENST00000468179 TRMT2AQ8IZ69 625 aaKnown RBP18.5■□□□□ 0.55
COMMD3-206ENST00000468179 MRPL50Q8N5N7 158 aaKnown RBP18.5■□□□□ 0.55
COMMD3-206ENST00000468179 TBC1D16Q8TBP0 767 aa18.5■□□□□ 0.55
COMMD3-206ENST00000468179 GREM2Q9H772 168 aa18.5■□□□□ 0.55
COMMD3-206ENST00000468179 C9orf78Q9NZ63 289 aaPredicted RBP18.5■□□□□ 0.55
COMMD3-206ENST00000468179 POLLQ9UGP5 575 aa18.5■□□□□ 0.55
COMMD3-206ENST00000468179 XDHP47989 1333 aa18.5■□□□□ 0.55
COMMD3-206ENST00000468179 CSF1RP07333 972 aa18.49■□□□□ 0.55
COMMD3-206ENST00000468179 ATP2B4P23634 1241 aa18.49■□□□□ 0.55
COMMD3-206ENST00000468179 CASP7P55210 303 aa18.49■□□□□ 0.55
COMMD3-206ENST00000468179 CXCL9Q07325 125 aa18.49■□□□□ 0.55
COMMD3-206ENST00000468179 MIER1Q8N108 512 aa18.49■□□□□ 0.55
COMMD3-206ENST00000468179 CDCA7LQ96GN5 454 aa18.49■□□□□ 0.55
COMMD3-206ENST00000468179 CLEC11AQ9Y240 323 aa18.49■□□□□ 0.55
COMMD3-206ENST00000468179 SCN4AP35499 1836 aa18.49■□□□□ 0.55
COMMD3-206ENST00000468179 LRRC37AA6NMS7 1700 aa18.49■□□□□ 0.55
COMMD3-206ENST00000468179 GRM8O00222 908 aa18.49■□□□□ 0.55
COMMD3-206ENST00000468179 RIMBP2O15034 1052 aa18.49■□□□□ 0.55
COMMD3-206ENST00000468179 UFL1O94874 794 aa18.49■□□□□ 0.55
COMMD3-206ENST00000468179 ITGA6P23229 1130 aa18.49■□□□□ 0.55
COMMD3-206ENST00000468179 MPHOSPH8Q99549 860 aa18.49■□□□□ 0.55
COMMD3-206ENST00000468179 BCL2L13Q9BXK5 485 aa18.49■□□□□ 0.55
COMMD3-206ENST00000468179 ANKRD18BA2A2Z9 1011 aa18.48■□□□□ 0.55
COMMD3-206ENST00000468179 USP50Q70EL3 339 aaPredicted RBP18.48■□□□□ 0.55
COMMD3-206ENST00000468179 SSH1Q8WYL5 1049 aa18.48■□□□□ 0.55
COMMD3-206ENST00000468179 COL4A5P29400 1685 aa18.47■□□□□ 0.55
COMMD3-206ENST00000468179 RAD17O75943 681 aa18.47■□□□□ 0.55
COMMD3-206ENST00000468179 SCNN1DP51172 638 aa18.47■□□□□ 0.55
COMMD3-206ENST00000468179 IFIT5Q13325 482 aaKnown RBP18.47■□□□□ 0.55
COMMD3-206ENST00000468179 ANKRD2Q9GZV1 360 aa18.47■□□□□ 0.55
COMMD3-206ENST00000468179 ECE2O60344 883 aa18.46■□□□□ 0.55
COMMD3-206ENST00000468179 DBNDD1Q9H9R9 158 aa18.46■□□□□ 0.55
COMMD3-206ENST00000468179 ADARB2Q9NS39 739 aaKnown RBP18.46■□□□□ 0.55
COMMD3-206ENST00000468179 SMC4Q9NTJ3 1288 aa18.46■□□□□ 0.55
COMMD3-206ENST00000468179 GPRC5DQ9NZD1 345 aa18.46■□□□□ 0.55
COMMD3-206ENST00000468179 MINPP1Q9UNW1 487 aa18.46■□□□□ 0.55
COMMD3-206ENST00000468179 TAF1P21675 1872 aa18.45■□□□□ 0.54
COMMD3-206ENST00000468179 POTEIP0CG38 1075 aa18.45■□□□□ 0.54
COMMD3-206ENST00000468179 POTEJP0CG39 1038 aa18.45■□□□□ 0.54
COMMD3-206ENST00000468179 EPS15P42566 896 aa18.45■□□□□ 0.54
COMMD3-206ENST00000468179 GMPSP49915 693 aaPredicted RBP18.45■□□□□ 0.54
COMMD3-206ENST00000468179 FAM161AQ3B820 660 aa18.45■□□□□ 0.54
COMMD3-206ENST00000468179 LEMD3Q9Y2U8 911 aa18.45■□□□□ 0.54
COMMD3-206ENST00000468179 CHMP3Q9Y3E7 222 aa18.45■□□□□ 0.54
COMMD3-206ENST00000468179 DUOX1Q9NRD9 1551 aa18.45■□□□□ 0.54
COMMD3-206ENST00000468179 YDJCA8MPS7 323 aa18.44■□□□□ 0.54
COMMD3-206ENST00000468179 H7C1D1 291 aa18.44■□□□□ 0.54
COMMD3-206ENST00000468179 RPS12P25398 132 aaKnown RBP18.44■□□□□ 0.54
COMMD3-206ENST00000468179 FOXO4P98177 505 aa18.44■□□□□ 0.54
COMMD3-206ENST00000468179 DOK7Q18PE1 504 aa18.44■□□□□ 0.54
COMMD3-206ENST00000468179 CCDC57Q2TAC2 916 aa18.44■□□□□ 0.54
COMMD3-206ENST00000468179 DPF2Q92785 391 aa18.44■□□□□ 0.54
COMMD3-206ENST00000468179 CCT4P50991 539 aaKnown RBP18.43■□□□□ 0.54
COMMD3-206ENST00000468179 TAF7LQ5H9L4 462 aa18.43■□□□□ 0.54
COMMD3-206ENST00000468179 LMBR1LQ6UX01 489 aa18.43■□□□□ 0.54
COMMD3-206ENST00000468179 CNTROBQ8N137 903 aa18.43■□□□□ 0.54
COMMD3-206ENST00000468179 PODNQ7Z5L7 613 aa18.42■□□□□ 0.54
COMMD3-206ENST00000468179 DNAJC5GQ8N7S2 189 aa18.42■□□□□ 0.54
COMMD3-206ENST00000468179 PSMD14O00487 310 aa18.41■□□□□ 0.54
COMMD3-206ENST00000468179 KCNJ4P48050 445 aa18.41■□□□□ 0.54
COMMD3-206ENST00000468179 BRPF1P55201 1214 aaPredicted RBP18.41■□□□□ 0.54
COMMD3-206ENST00000468179 GPR101Q96P66 508 aaPredicted RBP18.41■□□□□ 0.54
COMMD3-206ENST00000468179 CREBZFQ9NS37 354 aa18.41■□□□□ 0.54
COMMD3-206ENST00000468179 CNOT7Q9UIV1 285 aaKnown RBP18.41■□□□□ 0.54
COMMD3-206ENST00000468179 UTYO14607 1347 aa18.41■□□□□ 0.54
COMMD3-206ENST00000468179 COL4A1P02462 1669 aa18.41■□□□□ 0.54
COMMD3-206ENST00000468179 MYH3P11055 1940 aa18.4■□□□□ 0.54
COMMD3-206ENST00000468179 MED23Q9ULK4 1368 aa18.4■□□□□ 0.54
COMMD3-206ENST00000468179 ZC3H15Q8WU90 426 aaKnown RBP18.4■□□□□ 0.54
COMMD3-206ENST00000468179 KLRG1Q96E93 195 aa18.4■□□□□ 0.54
COMMD3-206ENST00000468179 API5Q9BZZ5 524 aaKnown RBP18.4■□□□□ 0.54
COMMD3-206ENST00000468179 HDAC5Q9UQL6 1122 aa18.4■□□□□ 0.54
COMMD3-206ENST00000468179 ZNF804BA4D1E1 1349 aa18.39■□□□□ 0.53
COMMD3-206ENST00000468179 PASKQ96RG2 1323 aa18.39■□□□□ 0.53
COMMD3-206ENST00000468179 ITGBL1O95965 494 aaPredicted RBP18.39■□□□□ 0.53
COMMD3-206ENST00000468179 VIL1P09327 827 aaKnown RBP18.39■□□□□ 0.53
COMMD3-206ENST00000468179 ATXN8OSP0DMR3 200 aa18.39■□□□□ 0.53
COMMD3-206ENST00000468179 HNRNPUQ00839 825 aaKnown RBP eCLIP18.39■□□□□ 0.53
COMMD3-206ENST00000468179 MAP1SQ66K74 1059 aaPredicted RBP18.39■□□□□ 0.53
COMMD3-206ENST00000468179 COA1Q9GZY4 146 aa18.39■□□□□ 0.53
COMMD3-206ENST00000468179 HTRA3P83110 453 aa18.38■□□□□ 0.53
COMMD3-206ENST00000468179 CHRNDQ07001 517 aa18.38■□□□□ 0.53
COMMD3-206ENST00000468179 LDHAL6AQ6ZMR3 332 aa18.38■□□□□ 0.53
COMMD3-206ENST00000468179 MICALL2Q8IY33 904 aa18.38■□□□□ 0.53
COMMD3-206ENST00000468179 SUCLG2Q96I99 432 aa18.38■□□□□ 0.53
COMMD3-206ENST00000468179 NOB1Q9ULX3 412 aaKnown RBP18.38■□□□□ 0.53
COMMD3-206ENST00000468179 ZBTB12Q9Y330 459 aaPredicted RBP18.38■□□□□ 0.53
COMMD3-206ENST00000468179 LTBP1Q14766 1721 aa18.38■□□□□ 0.53
COMMD3-206ENST00000468179 KIF16BQ96L93 1317 aa18.37■□□□□ 0.53
COMMD3-206ENST00000468179 USP17L3A6NCW0 530 aa18.37■□□□□ 0.53
COMMD3-206ENST00000468179 USP17L4A6NCW7 530 aa18.37■□□□□ 0.53
COMMD3-206ENST00000468179 TMEM88BA6NKF7 163 aa18.37■□□□□ 0.53
COMMD3-206ENST00000468179 NBPF7P0C2Y1 421 aaPredicted RBP18.37■□□□□ 0.53
COMMD3-206ENST00000468179 RARSP54136 660 aaKnown RBP18.37■□□□□ 0.53
COMMD3-206ENST00000468179 EPHA10Q5JZY3 1008 aa18.37■□□□□ 0.53
COMMD3-206ENST00000468179 USP17L1Q7RTZ2 530 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms