RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 PPP1R1BQ9UD71 204 aaPredicted RBP8.48□□□□□ -1.05
SCAF4-204ENST00000467731 KIAA1551Q9HCM1 1747 aa8.48□□□□□ -1.05
SCAF4-204ENST00000467731 H0YIN7 160 aa8.47□□□□□ -1.05
SCAF4-204ENST00000467731 NPR1P16066 1061 aa8.47□□□□□ -1.05
SCAF4-204ENST00000467731 HOXA10P31260 410 aaPredicted RBP8.47□□□□□ -1.05
SCAF4-204ENST00000467731 RPS8P62241 208 aaKnown RBP8.47□□□□□ -1.05
SCAF4-204ENST00000467731 GRAPQ13588 217 aa8.47□□□□□ -1.05
SCAF4-204ENST00000467731 C2CD5Q86YS7 1000 aa8.47□□□□□ -1.05
SCAF4-204ENST00000467731 GRAPLQ8TC17 118 aaPredicted RBP8.47□□□□□ -1.05
SCAF4-204ENST00000467731 RHPN1Q8TCX5 695 aa8.47□□□□□ -1.05
SCAF4-204ENST00000467731 RBM17Q96I25 401 aaKnown RBP8.47□□□□□ -1.05
SCAF4-204ENST00000467731 LRRCC1Q9C099 1032 aa8.47□□□□□ -1.05
SCAF4-204ENST00000467731 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.47□□□□□ -1.05
SCAF4-204ENST00000467731 SMARCA5O60264 1052 aaPredicted RBP8.47□□□□□ -1.05
SCAF4-204ENST00000467731 RAB11FIP3O75154 756 aa8.47□□□□□ -1.05
SCAF4-204ENST00000467731 CIAO1O76071 339 aa8.47□□□□□ -1.05
SCAF4-204ENST00000467731 IL15P40933 162 aaPredicted RBP8.47□□□□□ -1.05
SCAF4-204ENST00000467731 NUCB1Q02818 461 aa8.47□□□□□ -1.05
SCAF4-204ENST00000467731 KIF1BPQ96EK5 621 aa8.47□□□□□ -1.05
SCAF4-204ENST00000467731 MASTLQ96GX5 879 aa8.47□□□□□ -1.05
SCAF4-204ENST00000467731 IL1RAPL2Q9NP60 686 aa8.47□□□□□ -1.05
SCAF4-204ENST00000467731 FBXO3Q9UK99 471 aa8.47□□□□□ -1.05
SCAF4-204ENST00000467731 PDZRN3Q9UPQ7 1066 aa8.47□□□□□ -1.05
SCAF4-204ENST00000467731 RIPOR2Q9Y4F9 1068 aa8.47□□□□□ -1.05
SCAF4-204ENST00000467731 SLX4Q8IY92 1834 aa8.47□□□□□ -1.05
SCAF4-204ENST00000467731 BRCA1P38398 1863 aaKnown RBP8.47□□□□□ -1.05
SCAF4-204ENST00000467731 SLC51AQ86UW1 340 aa8.46□□□□□ -1.05
SCAF4-204ENST00000467731 SKAP1Q86WV1 359 aa8.46□□□□□ -1.05
SCAF4-204ENST00000467731 ERC1Q8IUD2 1116 aa8.46□□□□□ -1.05
SCAF4-204ENST00000467731 IL27Q8NEV9 243 aa8.46□□□□□ -1.05
SCAF4-204ENST00000467731 ZNF622Q969S3 477 aaKnown RBP eCLIP8.46□□□□□ -1.054e-9■■□□□ 13.9
SCAF4-204ENST00000467731 LNPKQ9C0E8 428 aa8.46□□□□□ -1.05
SCAF4-204ENST00000467731 BSDC1Q9NW68 430 aaPredicted RBP8.46□□□□□ -1.05
SCAF4-204ENST00000467731 TFCP2Q12800 502 aa8.46□□□□□ -1.06
SCAF4-204ENST00000467731 CHD1LQ86WJ1 897 aa8.46□□□□□ -1.06
SCAF4-204ENST00000467731 HOMEZQ8IX15 550 aa8.46□□□□□ -1.06
SCAF4-204ENST00000467731 CRAMP1Q96RY5 1269 aa8.46□□□□□ -1.06
SCAF4-204ENST00000467731 A0A0G2JLW4 131 aa8.46□□□□□ -1.06
SCAF4-204ENST00000467731 ALDH1B1P30837 517 aa8.46□□□□□ -1.06
SCAF4-204ENST00000467731 ZBTB47Q9UFB7 747 aaPredicted RBP8.46□□□□□ -1.06
SCAF4-204ENST00000467731 LRRC37AA6NMS7 1700 aa8.45□□□□□ -1.06
SCAF4-204ENST00000467731 METTL24Q5JXM2 366 aa8.45□□□□□ -1.06
SCAF4-204ENST00000467731 HELBQ8NG08 1087 aaPredicted RBP8.45□□□□□ -1.06
SCAF4-204ENST00000467731 MINPP1Q9UNW1 487 aa8.45□□□□□ -1.06
SCAF4-204ENST00000467731 MROH5Q6ZUA9 1318 aa8.45□□□□□ -1.06
SCAF4-204ENST00000467731 TAF5LO75529 589 aa8.45□□□□□ -1.06
SCAF4-204ENST00000467731 DPEP1P16444 411 aa8.45□□□□□ -1.06
SCAF4-204ENST00000467731 KCNA3P22001 575 aa8.45□□□□□ -1.06
SCAF4-204ENST00000467731 TGFB2P61812 414 aa8.45□□□□□ -1.06
SCAF4-204ENST00000467731 CHRNDQ07001 517 aa8.45□□□□□ -1.06
SCAF4-204ENST00000467731 STYK1Q6J9G0 422 aa8.45□□□□□ -1.06
SCAF4-204ENST00000467731 VGLL2Q8N8G2 317 aa8.45□□□□□ -1.06
SCAF4-204ENST00000467731 CEP126Q9P2H0 1117 aa8.45□□□□□ -1.06
SCAF4-204ENST00000467731 CD2APQ9Y5K6 639 aa8.45□□□□□ -1.06
SCAF4-204ENST00000467731 BBOX1O75936 387 aa8.44□□□□□ -1.06
SCAF4-204ENST00000467731 C16orf71Q8IYS4 520 aaPredicted RBP8.44□□□□□ -1.06
SCAF4-204ENST00000467731 CLASRPQ8N2M8 674 aaKnown RBP8.44□□□□□ -1.06
SCAF4-204ENST00000467731 SNAP23O00161 211 aa8.44□□□□□ -1.06
SCAF4-204ENST00000467731 PPEF1O14829 653 aaPredicted RBP8.44□□□□□ -1.06
SCAF4-204ENST00000467731 PDE8BO95263 885 aa8.44□□□□□ -1.06
SCAF4-204ENST00000467731 PDE4AP27815 886 aa8.44□□□□□ -1.06
SCAF4-204ENST00000467731 TNNI3KQ59H18 835 aa8.44□□□□□ -1.06
SCAF4-204ENST00000467731 PRPF40BQ6NWY9 871 aaKnown RBP8.44□□□□□ -1.06
SCAF4-204ENST00000467731 EAF2Q96CJ1 260 aaPredicted RBP8.44□□□□□ -1.06
SCAF4-204ENST00000467731 FPGT-TNNI3KV9GXZ4 949 aa8.44□□□□□ -1.06
SCAF4-204ENST00000467731 OLFM4Q6UX06 510 aa8.43□□□□□ -1.06
SCAF4-204ENST00000467731 OTUD7AQ8TE49 926 aaPredicted RBP8.43□□□□□ -1.06
SCAF4-204ENST00000467731 CNKSR1Q969H4 720 aa8.43□□□□□ -1.06
SCAF4-204ENST00000467731 WWC3Q9ULE0 1092 aa8.43□□□□□ -1.06
SCAF4-204ENST00000467731 ZNF609O15014 1411 aa8.43□□□□□ -1.06
SCAF4-204ENST00000467731 RGS3P49796 1198 aa8.43□□□□□ -1.06
SCAF4-204ENST00000467731 AACSQ86V21 672 aa8.43□□□□□ -1.06
SCAF4-204ENST00000467731 NLGN2Q8NFZ4 835 aa8.43□□□□□ -1.06
SCAF4-204ENST00000467731 FHDC1Q9C0D6 1143 aaPredicted RBP8.43□□□□□ -1.06
SCAF4-204ENST00000467731 CCDC8Q9H0W5 538 aaPredicted RBP8.43□□□□□ -1.06
SCAF4-204ENST00000467731 LTBP1Q14766 1721 aa8.43□□□□□ -1.06
SCAF4-204ENST00000467731 ARAP2Q8WZ64 1704 aa8.43□□□□□ -1.06
SCAF4-204ENST00000467731 A0A1B0GUL7 405 aa8.43□□□□□ -1.06
SCAF4-204ENST00000467731 WTIPA6NIX2 430 aaPredicted RBP8.43□□□□□ -1.06
SCAF4-204ENST00000467731 TIMM10P62072 90 aa8.43□□□□□ -1.06
SCAF4-204ENST00000467731 TMC4Q7Z404 712 aa8.43□□□□□ -1.06
SCAF4-204ENST00000467731 TTLL6Q8N841 843 aa8.43□□□□□ -1.06
SCAF4-204ENST00000467731 TLR7Q9NYK1 1049 aaKnown RBP8.43□□□□□ -1.06
SCAF4-204ENST00000467731 ANKIB1Q9P2G1 1089 aa8.43□□□□□ -1.06
SCAF4-204ENST00000467731 ATP6V0A2Q9Y487 856 aa8.43□□□□□ -1.06
SCAF4-204ENST00000467731 PUM3Q15397 648 aaKnown RBP8.42□□□□□ -1.06
SCAF4-204ENST00000467731 ATP2B3Q16720 1220 aa8.42□□□□□ -1.06
SCAF4-204ENST00000467731 SP8Q8IXZ3 490 aa8.42□□□□□ -1.06
SCAF4-204ENST00000467731 NEUROD6Q96NK8 337 aa8.42□□□□□ -1.06
SCAF4-204ENST00000467731 GPR108Q9NPR9 543 aa8.42□□□□□ -1.06
SCAF4-204ENST00000467731 PIM2Q9P1W9 311 aa8.42□□□□□ -1.06
SCAF4-204ENST00000467731 ZNF219Q9P2Y4 722 aaPredicted RBP8.42□□□□□ -1.06
SCAF4-204ENST00000467731 NSFL1CQ9UNZ2 370 aaKnown RBP8.42□□□□□ -1.06
SCAF4-204ENST00000467731 AKAP2Q9Y2D5 859 aa8.42□□□□□ -1.06
SCAF4-204ENST00000467731 IFIT2P09913 472 aaKnown RBP8.42□□□□□ -1.06
SCAF4-204ENST00000467731 ANKRD2Q9GZV1 360 aa8.42□□□□□ -1.06
SCAF4-204ENST00000467731 DBNLQ9UJU6 430 aaKnown RBP8.42□□□□□ -1.06
SCAF4-204ENST00000467731 XDHP47989 1333 aa8.42□□□□□ -1.06
SCAF4-204ENST00000467731 SALL3Q9BXA9 1300 aa8.42□□□□□ -1.06
SCAF4-204ENST00000467731 FGFR2P21802 821 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms