RNA–Protein interactions for RNA: ENST00000467465.1

HLA-DOA-203, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-203ENST00000467465 CDCA7LQ96GN5 454 aa12.25□□□□□ -0.45
HLA-DOA-203ENST00000467465 CCDC85AQ96PX6 553 aaPredicted RBP12.25□□□□□ -0.45
HLA-DOA-203ENST00000467465 TAF1DQ9H5J8 278 aaPredicted RBP12.25□□□□□ -0.45
HLA-DOA-203ENST00000467465 ANKIB1Q9P2G1 1089 aa12.25□□□□□ -0.45
HLA-DOA-203ENST00000467465 GJA3Q9Y6H8 435 aa12.25□□□□□ -0.45
HLA-DOA-203ENST00000467465 XDHP47989 1333 aa12.25□□□□□ -0.45
HLA-DOA-203ENST00000467465 PSME4Q14997 1843 aa12.25□□□□□ -0.45
HLA-DOA-203ENST00000467465 GRM8O00222 908 aa12.24□□□□□ -0.45
HLA-DOA-203ENST00000467465 CSF1RP07333 972 aa12.24□□□□□ -0.45
HLA-DOA-203ENST00000467465 POTEIP0CG38 1075 aa12.24□□□□□ -0.45
HLA-DOA-203ENST00000467465 POTEJP0CG39 1038 aa12.24□□□□□ -0.45
HLA-DOA-203ENST00000467465 EPHX2P34913 555 aa12.24□□□□□ -0.45
HLA-DOA-203ENST00000467465 IGHMBP2P38935 993 aaKnown RBP12.24□□□□□ -0.45
HLA-DOA-203ENST00000467465 SLC4A10Q6U841 1118 aa12.24□□□□□ -0.45
HLA-DOA-203ENST00000467465 LDHDQ86WU2 507 aa12.24□□□□□ -0.45
HLA-DOA-203ENST00000467465 ADAMTSL1Q8N6G6 1762 aa12.24□□□□□ -0.45
HLA-DOA-203ENST00000467465 SSH1Q8WYL5 1049 aa12.24□□□□□ -0.45
HLA-DOA-203ENST00000467465 GREM2Q9H772 168 aa12.24□□□□□ -0.45
HLA-DOA-203ENST00000467465 BSDC1Q9NW68 430 aaPredicted RBP12.24□□□□□ -0.45
HLA-DOA-203ENST00000467465 C9orf78Q9NZ63 289 aaPredicted RBP12.24□□□□□ -0.45
HLA-DOA-203ENST00000467465 GGA1Q9UJY5 639 aa12.24□□□□□ -0.45
HLA-DOA-203ENST00000467465 UFL1O94874 794 aa12.23□□□□□ -0.45
HLA-DOA-203ENST00000467465 ITGA6P23229 1130 aa12.23□□□□□ -0.45
HLA-DOA-203ENST00000467465 VEGFBP49765 207 aa12.23□□□□□ -0.45
HLA-DOA-203ENST00000467465 LBX1P52954 281 aa12.23□□□□□ -0.45
HLA-DOA-203ENST00000467465 CIAPIN1Q6FI81 312 aa12.23□□□□□ -0.45
HLA-DOA-203ENST00000467465 TBC1D16Q8TBP0 767 aa12.23□□□□□ -0.45
HLA-DOA-203ENST00000467465 ZC3H12CQ9C0D7 883 aaKnown RBP12.23□□□□□ -0.45
HLA-DOA-203ENST00000467465 SMC4Q9NTJ3 1288 aa12.23□□□□□ -0.45
HLA-DOA-203ENST00000467465 POLLQ9UGP5 575 aa12.23□□□□□ -0.45
HLA-DOA-203ENST00000467465 CNTNAP1P78357 1384 aa12.22□□□□□ -0.45
HLA-DOA-203ENST00000467465 ANKRD18BA2A2Z9 1011 aa12.22□□□□□ -0.45
HLA-DOA-203ENST00000467465 TMEM88BA6NKF7 163 aa12.22□□□□□ -0.45
HLA-DOA-203ENST00000467465 G3V3G9 751 aa12.22□□□□□ -0.45
HLA-DOA-203ENST00000467465 ATP2B4P23634 1241 aa12.22□□□□□ -0.45
HLA-DOA-203ENST00000467465 CXCL9Q07325 125 aa12.22□□□□□ -0.45
HLA-DOA-203ENST00000467465 FAM161AQ3B820 660 aa12.22□□□□□ -0.45
HLA-DOA-203ENST00000467465 DCAF8Q5TAQ9 597 aa12.22□□□□□ -0.45
HLA-DOA-203ENST00000467465 MPHOSPH8Q99549 860 aa12.22□□□□□ -0.45
HLA-DOA-203ENST00000467465 A0A1B0GUL6 1792 aa12.22□□□□□ -0.45
HLA-DOA-203ENST00000467465 SCNN1DP51172 638 aa12.21□□□□□ -0.45
HLA-DOA-203ENST00000467465 IFIT5Q13325 482 aaKnown RBP12.21□□□□□ -0.45
HLA-DOA-203ENST00000467465 EAPPQ56P03 285 aaPredicted RBP12.21□□□□□ -0.45
HLA-DOA-203ENST00000467465 USP50Q70EL3 339 aaPredicted RBP12.21□□□□□ -0.45
HLA-DOA-203ENST00000467465 BCL2L13Q9BXK5 485 aa12.21□□□□□ -0.45
HLA-DOA-203ENST00000467465 ANKRD2Q9GZV1 360 aa12.21□□□□□ -0.45
HLA-DOA-203ENST00000467465 WBP1LQ9NX94 342 aa12.21□□□□□ -0.45
HLA-DOA-203ENST00000467465 MINPP1Q9UNW1 487 aa12.21□□□□□ -0.45
HLA-DOA-203ENST00000467465 CLEC11AQ9Y240 323 aa12.21□□□□□ -0.45
HLA-DOA-203ENST00000467465 UTYO14607 1347 aa12.2□□□□□ -0.46
HLA-DOA-203ENST00000467465 PASKQ96RG2 1323 aa12.2□□□□□ -0.46
HLA-DOA-203ENST00000467465 SCN9AQ15858 1988 aa12.2□□□□□ -0.46
HLA-DOA-203ENST00000467465 RIMBP2O15034 1052 aa12.2□□□□□ -0.46
HLA-DOA-203ENST00000467465 ECE2O60344 883 aa12.2□□□□□ -0.46
HLA-DOA-203ENST00000467465 RAD17O75943 681 aa12.2□□□□□ -0.46
HLA-DOA-203ENST00000467465 BRPF1P55201 1214 aaPredicted RBP12.2□□□□□ -0.46
HLA-DOA-203ENST00000467465 FOXO4P98177 505 aa12.2□□□□□ -0.46
HLA-DOA-203ENST00000467465 CCDC57Q2TAC2 916 aa12.2□□□□□ -0.46
HLA-DOA-203ENST00000467465 DEFB115Q30KQ5 88 aa12.2□□□□□ -0.46
HLA-DOA-203ENST00000467465 DBNDD1Q9H9R9 158 aa12.2□□□□□ -0.46
HLA-DOA-203ENST00000467465 ADARB2Q9NS39 739 aaKnown RBP12.2□□□□□ -0.46
HLA-DOA-203ENST00000467465 GPRC5DQ9NZD1 345 aa12.2□□□□□ -0.46
HLA-DOA-203ENST00000467465 CHMP3Q9Y3E7 222 aa12.2□□□□□ -0.46
HLA-DOA-203ENST00000467465 MED23Q9ULK4 1368 aa12.19□□□□□ -0.46
HLA-DOA-203ENST00000467465 KIF16BQ96L93 1317 aa12.19□□□□□ -0.46
HLA-DOA-203ENST00000467465 YDJCA8MPS7 323 aa12.19□□□□□ -0.46
HLA-DOA-203ENST00000467465 ITGBL1O95965 494 aaPredicted RBP12.19□□□□□ -0.46
HLA-DOA-203ENST00000467465 RPS12P25398 132 aaKnown RBP12.19□□□□□ -0.46
HLA-DOA-203ENST00000467465 CCT4P50991 539 aaKnown RBP12.19□□□□□ -0.46
HLA-DOA-203ENST00000467465 HNRNPUQ00839 825 aaKnown RBP eCLIP12.19□□□□□ -0.46
HLA-DOA-203ENST00000467465 TAF7LQ5H9L4 462 aa12.19□□□□□ -0.46
HLA-DOA-203ENST00000467465 LMBR1LQ6UX01 489 aa12.19□□□□□ -0.46
HLA-DOA-203ENST00000467465 ABHD8Q96I13 439 aa12.19□□□□□ -0.46
HLA-DOA-203ENST00000467465 LEMD3Q9Y2U8 911 aa12.19□□□□□ -0.46
HLA-DOA-203ENST00000467465 TRPM7Q96QT4 1865 aa12.19□□□□□ -0.46
HLA-DOA-203ENST00000467465 EPS15P42566 896 aa12.18□□□□□ -0.46
HLA-DOA-203ENST00000467465 GMPSP49915 693 aaPredicted RBP12.18□□□□□ -0.46
HLA-DOA-203ENST00000467465 MAP2K1Q02750 393 aaPredicted RBP12.18□□□□□ -0.46
HLA-DOA-203ENST00000467465 DOK7Q18PE1 504 aa12.18□□□□□ -0.46
HLA-DOA-203ENST00000467465 DPF2Q92785 391 aa12.18□□□□□ -0.46
HLA-DOA-203ENST00000467465 API5Q9BZZ5 524 aaKnown RBP12.18□□□□□ -0.46
HLA-DOA-203ENST00000467465 ZNF609O15014 1411 aa12.18□□□□□ -0.46
HLA-DOA-203ENST00000467465 H7C1D1 291 aa12.17□□□□□ -0.46
HLA-DOA-203ENST00000467465 PSMD14O00487 310 aa12.17□□□□□ -0.46
HLA-DOA-203ENST00000467465 RARSP54136 660 aaKnown RBP12.17□□□□□ -0.46
HLA-DOA-203ENST00000467465 PODNQ7Z5L7 613 aa12.17□□□□□ -0.46
HLA-DOA-203ENST00000467465 GPR101Q96P66 508 aaPredicted RBP12.17□□□□□ -0.46
HLA-DOA-203ENST00000467465 ZNF804BA4D1E1 1349 aa12.16□□□□□ -0.46
HLA-DOA-203ENST00000467465 CCDC85CA6NKD9 419 aa12.16□□□□□ -0.46
HLA-DOA-203ENST00000467465 VIL1P09327 827 aaKnown RBP12.16□□□□□ -0.46
HLA-DOA-203ENST00000467465 NBPF7P0C2Y1 421 aaPredicted RBP12.16□□□□□ -0.46
HLA-DOA-203ENST00000467465 HSPA8P11142 646 aaKnown RBP12.16□□□□□ -0.46
HLA-DOA-203ENST00000467465 KCNJ4P48050 445 aa12.16□□□□□ -0.46
HLA-DOA-203ENST00000467465 MLLT1Q03111 559 aaPredicted RBP12.16□□□□□ -0.46
HLA-DOA-203ENST00000467465 CHRNDQ07001 517 aa12.16□□□□□ -0.46
HLA-DOA-203ENST00000467465 EPHA10Q5JZY3 1008 aa12.16□□□□□ -0.46
HLA-DOA-203ENST00000467465 CNTROBQ8N137 903 aa12.16□□□□□ -0.46
HLA-DOA-203ENST00000467465 ARHGAP45Q92619 1136 aa12.16□□□□□ -0.46
HLA-DOA-203ENST00000467465 SUCLG2Q96I99 432 aa12.16□□□□□ -0.46
HLA-DOA-203ENST00000467465 COA1Q9GZY4 146 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms